Gchil8060.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8060.t1
Unique NameGchil8060.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length165
Homology
BLAST of Gchil8060.t1 vs. uniprot
Match: A0A2V3IFP6_9FLOR (Plexin-D1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFP6_9FLOR)

HSP 1 Score: 189 bits (479), Expect = 1.820e-52
Identity = 95/164 (57.93%), Postives = 123/164 (75.00%), Query Frame = 0
Query:    1 MHIEYSLQVLKISEDATGASIKRNSNAVTSTPIISQNSSQIYEPFFEIAFINYVSTPVDLASIEYCEEVVVTPAQESNENTWVFPLFTPVSQAQTLVSTDESLLTFPAYFTVGAEPGRFSPAAKENLLTPSTEYSFLIPMFRAGFGVEELTILLKAVEQPSITF 164
            M IEYSLQ+ K S++ATGA+I+R S+ VTST I+ ++++Q +E   EI+ IN  S  VD   ++Y E+VV+TP  ESNE TW F L +P+SQ+QTL+ TDE+LLTFP Y+TVGAEPGR+S   K N+L+P+TEY FLI  FR GF V E TI+LK VEQP ITF
Sbjct:  994 MFIEYSLQISKTSQNATGAAIERMSDTVTSTLILPEDATQEFETLAEISVINNQSATVDRMHVKYYEDVVITPVSESNETTWSFELVSPLSQSQTLLFTDENLLTFPGYYTVGAEPGRYSLGIKANVLSPNTEYVFLIKTFRTGFAVNEQTIILKTVEQPVITF 1157          
BLAST of Gchil8060.t1 vs. uniprot
Match: R7QPQ0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPQ0_CHOCR)

HSP 1 Score: 140 bits (353), Expect = 1.360e-35
Identity = 73/162 (45.06%), Postives = 100/162 (61.73%), Query Frame = 0
Query:    1 MHIEYSLQVLKISEDATGASIKRNSNAVTSTPIISQNSSQIYEPFFEIAFINYVSTPVDLASIEYCEEVVVTPAQESNENTWVFPLFTPVSQAQTLVSTDESLLTFPAYFTVGAEPGRFSPAAKENLLTPSTEYSFLIPMFRAGFGVEELTILLKAVEQPSI 162
            +HI+Y LQV K S +AT   I+R S+ V ST I++Q + Q YE    I  +N  S  +D  S++Y E+V++TP   + E TW F L +P+SQ  TL+++D +LL  P YF    EPGR S   K N+LTP+T+Y FL+  FR GF V E  I L  VE+P I
Sbjct:   39 VHIQYGLQVSKTSVNATDDEIERVSDDVQSTLILAQEAEQSYESLQGIVVLNNQSVLLDKTSVKYYEDVIITPESATEETTWKFELLSPLSQTFTLLASDSNLLDLPGYFGARDEPGRLSLGLKANVLTPNTQYEFLVSSFRTGFSVNEQKISLTTVEKPRI 200          
The following BLAST results are available for this feature:
BLAST of Gchil8060.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IFP6_9FLOR1.820e-5257.93Plexin-D1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
R7QPQ0_CHOCR1.360e-3545.06Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004435_piloncontigtig00004435_pilon:758929..759423 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8060.t1Gchil8060.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004435_pilon 758929..759423 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8060.t1 ID=Gchil8060.t1|Name=Gchil8060.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=165bp
MHIEYSLQVLKISEDATGASIKRNSNAVTSTPIISQNSSQIYEPFFEIAF
INYVSTPVDLASIEYCEEVVVTPAQESNENTWVFPLFTPVSQAQTLVSTD
ESLLTFPAYFTVGAEPGRFSPAAKENLLTPSTEYSFLIPMFRAGFGVEEL
TILLKAVEQPSITF*
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