Gchil7806.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7806.t1
Unique Name	Gchil7806.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	498

Homology

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BLAST of Gchil7806.t1 vs. uniprot
Match: R7QL32_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL32_CHOCR)

HSP 1 Score: 625 bits (1611), Expect = 4.030e-220
Identity = 305/498 (61.24%), Postives = 377/498 (75.70%), Query Frame = 0

Query:    1 MTHLQRHPEYGLRAVHDTEIEHYLETLDTKYGCEPTFVQTVLEISSIYEENLSPNTLTGLNLDYDVIPDDPTVFFHEICNLARTAPFTAAACLDTSSITSAYYNAATGGVKELERPFRAAFFIDRFVTRVRDMKDRRETPFAVLQAVAAEPKLVDFSEYVCRYEIFIGPQESDGRIQSASFPDQTVMRAALLCIHLASGPNVTYEQMMHAKRIRGSLQDQLK-PNFTQLQDEYDRFVQTMNEEEKVNALMCTLAGRNFLVERSDVALACYYWDPTTLREVRVALQKYAEDANGPKLYGYYRRIAVAWTLVVSGVLLAILAGVLNWGKRENQFERVNDVFQTFLLVLSLPAFTVKIAATNGEQAIKDWLVGACRISTMEVLEKEIHKRLRGNKRRGWIAIQRVKCETDDKQNWTAPDNMCFKTSHLNGNLRARRDRTMADLELVFGTDGKRARSWVELSNETNILGRDVNHLQFTCGTTLSNKTSAFFSHTPSRRVWFA 497
            MTHLQRH +YG +AVHD  ++  L  L T +G   +F+ T+ EI+    E++S   L  L LD++ +P DP+ F H +  +A+TAP +AAACLDTSSI    YN ATGGVKE +RP+ AAFFIDRF +R+R+++ R ETPFAVL+A++  P+  D +++V RYEIF GPQE+DGRIQS S PDQ V R  LLC  LA    +T +Q     +    L D++       + DEY     TM+  EKVNALMCTLAGRNF+VER D A+ACYYWDP +L++VR  ++K ++D NGPKLYG Y RI +AWTLVVSG LLAIL+GVLNW KREN+FERVNDVF TFLLVLSLPAFTVKIAATNG+QAIKDWL G  R+  +E LE  I +RL+GNKRRGW+AIQRVKCETDD+QNWTA DNMCFKT H++G+LRA +DR M++LE+V GTDGKRARSW+++SNETNI+G DVNHLQFTCGTT   +T AFFSHTPS RVWFA
Sbjct:    1 MTHLQRHSDYGRKAVHDRAMDTLLSELSTSHGRTLSFIATIQEIARRNGESVSHKDLLHLQLDFNALPPDPSDFLHALLLIAQTAPNSAAACLDTSSILGVEYNCATGGVKETDRPYEAAFFIDRFHSRIRELQSREETPFAVLRALSPGPQNFDRNQFVSRYEIFYGPQENDGRIQSPSIPDQVVERGILLCFVLAEKRGMTVQQQHLRDQWVRKLSDEITGQTVNSVLDEYRHAASTMSAAEKVNALMCTLAGRNFIVERPDGAIACYYWDPESLKKVRHQMKKLSQDVNGPKLYGSYWRIGLAWTLVVSGSLLAILSGVLNWAKRENKFERVNDVFSTFLLVLSLPAFTVKIAATNGDQAIKDWLTGVMRVKNVEHLETHIARRLKGNKRRGWVAIQRVKCETDDRQNWTAKDNMCFKTEHMDGSLRAEKDRNMSELEVVIGTDGKRARSWIQISNETNIIGSDVNHLQFTCGTTNPIRTPAFFSHTPSPRVWFA 498

The following BLAST results are available for this feature:

BLAST of Gchil7806.t1 vs. uniprot

BLAST of Gchil7806.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
R7QL32_CHOCR	4.030e-220	61.24	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..302
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 303..325
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 337..356
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 326..336
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 357..497
None	No IPR available	TMHMM	TMhelix		coord: 302..324

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004401_pilon	contig	tig00004401_pilon:112480..113973 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7806.t1	Gchil7806.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004401_pilon 112480..113973 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7806.t1 ID=Gchil7806.t1|Name=Gchil7806.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=498bp
MTHLQRHPEYGLRAVHDTEIEHYLETLDTKYGCEPTFVQTVLEISSIYEE
NLSPNTLTGLNLDYDVIPDDPTVFFHEICNLARTAPFTAAACLDTSSITS
AYYNAATGGVKELERPFRAAFFIDRFVTRVRDMKDRRETPFAVLQAVAAE
PKLVDFSEYVCRYEIFIGPQESDGRIQSASFPDQTVMRAALLCIHLASGP
NVTYEQMMHAKRIRGSLQDQLKPNFTQLQDEYDRFVQTMNEEEKVNALMC
TLAGRNFLVERSDVALACYYWDPTTLREVRVALQKYAEDANGPKLYGYYR
RIAVAWTLVVSGVLLAILAGVLNWGKRENQFERVNDVFQTFLLVLSLPAF
TVKIAATNGEQAIKDWLVGACRISTMEVLEKEIHKRLRGNKRRGWIAIQR
VKCETDDKQNWTAPDNMCFKTSHLNGNLRARRDRTMADLELVFGTDGKRA
RSWVELSNETNILGRDVNHLQFTCGTTLSNKTSAFFSHTPSRRVWFA*