Gchil7750.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7750.t1
Unique NameGchil7750.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length383
Homology
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BLAST of Gchil7750.t1 vs. uniprot
Match: A0A1X6PAQ4_PORUM (CCHC-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PAQ4_PORUM)

HSP 1 Score: 69.3 bits (168), Expect = 3.110e-9
Identity = 45/168 (26.79%), Postives = 75/168 (44.64%), Query Frame = 0 
Query:  215 TNELFLKILDYRNYRLADRSAKYSGSVARRVAKWAKRMQLTI--TDKFSGADPIAVFKFLSLFRTACDKNGVHEGATLYLFQFFRTGQLRGRVVSKISGTTDLVDAQDRELLRFYPQVVHYLLETYATDDVVVDAHQEAVSIRQSSNMTESAFADDLWKKAYRCGNVL 380
            TN  +  +L Y +Y +   S  Y   +  +  K  + +      T  F G DP+ +F FLS F+ ACD  G   G    L  +   G  +   V+  S      D + R  +  Y + V++LL+ YAT D++ +A+   ++ RQ       +FAD L +   R   ++
Sbjct:  123 TNRRYRHLLSYESYFVNKTSLAYPPRLVDKADKINRALNGPFQGTKAFDGQDPLGIFGFLSTFKRACDSAGATHGQAFPLLSYRLAGDAKIAFVAACSTR----DTRHRFEINTYGEAVNWLLQKYATLDLLKEAYAAIIAARQEQEEAPRSFADRLERMCGRLDGLI 286
The following BLAST results are available for this feature:
BLAST of Gchil7750.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1X6PAQ4_PORUM3.110e-926.79CCHC-type domain-containing protein n=1 Tax=Porphy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:896374..897522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7750.t1Gchil7750.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025321_pilon 896374..897522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7750.t1 ID=Gchil7750.t1|Name=Gchil7750.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=383bp
MNGRLATGITDHTDYLITRIVLKIMESALFTGSLLRAVQGAVTRQAGNLV
PRTTPPQINHPVSIWKLPTEPPGVAELSAPRREYHQENPMVGQSRSRRET
SRLNERQIFHQKNPGEEQARSRREAPRLEERPLAPPDRLYEVQRPQDCIG
SDREIDSLGPYSAGKKRSNRRRKKKRSSKRRDHSDTSDSESASTETTDSE
VDEADVRGLRQLTTTNELFLKILDYRNYRLADRSAKYSGSVARRVAKWAK
RMQLTITDKFSGADPIAVFKFLSLFRTACDKNGVHEGATLYLFQFFRTGQ
LRGRVVSKISGTTDLVDAQDRELLRFYPQVVHYLLETYATDDVVVDAHQE
AVSIRQSSNMTESAFADDLWKKAYRCGNVLSE*
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