Gchil7708.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7708.t1
Unique NameGchil7708.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length779
Homology
BLAST of Gchil7708.t1 vs. uniprot
Match: A0A2V3IMI9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI9_9FLOR)

HSP 1 Score: 514 bits (1325), Expect = 5.110e-170
Identity = 315/642 (49.07%), Postives = 400/642 (62.31%), Query Frame = 0
Query:   89 LPRERKIRTSSDTDVPQALAPTPHSREIPFTGPEDPQPDSGLTTFATVVSPPPRLVDQARIVRLEEQLRSLRAAHNTLSREFTSLRGGLAYPPPSELAEDIRVLRSDVNTLLECFGALSSFAEGLENCFERLRSRLESVERTLTSPANVARPVVS------HRETQSRNRKSRK-NRDSNRKHGHPSDXXXXXXXXXXXXXXXXXSVSDDPQDRYGRSSRSKRSSATYGAIRSRPKGRRHPGLKPLKPTNPLYRTLLSYRYYRLEDSSLGRTPLDTGKVKDCIKRMELSLRNQSFTGDDPILVLDFLHRFVAEADILGMNEGQAYVALPHFLRGVAEDQFLSVRGSSRASEGGVTCWPEAVQYLLRSYATNSAIQAAILALRDTRQRTGELETDYSVRLNKASHRCGNVYPAGERCTMFIDGLDPAIKTLVAHYREQEPKVTYLELVQFARAEGDALRARNPGTWSKATKALLLESDSSSPSFATDGIPKQGYDNMNVIHHDGLSIPTTELPSTTD---GSVDSTARDTENGQVFYLNDRRTPAPRMPYSNGMTRSQRPGWVGNREPGRYTDSRNAVLRNAGVTLVCNLCYERGHTSPQCLLSLRDMARVVDNYEALSPQEKGSVPLTSYLRAKTDFPNALA 720
            LPR+      +D  VP +  P   +      GP DP     L     + S      D+  +  LE Q+R L+++   L ++ T LR         +++ D+RVLR+DVNT++E    L +  + +     RL  RLE+VE+T+   A      VS      HR      RK  K   D +      SD       XXX           +P  R  R+SRSK + AT+GA+R+R KGR+H GLK LKPTN LYR LLSYRYYRLEDSS+ RTP  TG++KDCIKR+EL+LR   FTG+DPIL+LDFL RFVAEADILGM+E QAY+ALP+FLRG+AEDQF SVRGSSRA+EGGVTCWPEAVQYLLRSYAT +AIQAAILALRDTRQ++ E ET YS RL KA HRCGNVY A ERCTMF+DGLDP I+TLVA +RE   ++TYLELVQFA+AEGDALRAR  GT  ++ K L LE+        T       YDNM+++  D  S+PTTELPSTT+   G VD            Y  +   P   +PYS+G TR+QRPGW   ++P      R   + +    ++C+LCY+ GH S  C L ++DMA+V+ NYEAL+P EK  VP ++YLRA++ FP  +A
Sbjct:   34 LPRDALTMPGNDDPVPASRGPRSVNEVPEAQGPADP----ALAVAQAMSS----RSDEFTLRELEAQVRILQSSQVNLIQDITKLRTRFDDADVRDVSNDVRVLRADVNTVMEGRKVLGTLLQEVAERLNRLADRLETVEQTIIHDAVPPGAPVSEGSRKWHRAMDCHRRKKVKMEEDLSSSSSSESDVRSHGFSXXX--------XXXEPNHR-SRASRSKYTEATHGAVRTREKGRKHLGLKELKPTNLLYRRLLSYRYYRLEDSSMERTPRGTGRLKDCIKRLELTLRKHQFTGEDPILILDFLARFVAEADILGMSEAQAYIALPYFLRGMAEDQFNSVRGSSRATEGGVTCWPEAVQYLLRSYATGNAIQAAILALRDTRQKSEESETAYSTRLTKAFHRCGNVYSAQERCTMFVDGLDPTIRTLVARHREDRRRITYLELVQFAQAEGDALRARK-GTKHRSGKVLHLEARQVPSPPLTRRTDHGMYDNMHLLQSDS-SVPTTELPSTTEPSTGDVDP---------AMYAGNH-VPGLTVPYSSG-TRTQRPGW---KDPYPPRSDRRPHIADQLRHIICHLCYKPGHVSTNCYLLMKDMAKVIVNYEALTPAEKERVPASAYLRARSVFPRNIA 642          
BLAST of Gchil7708.t1 vs. uniprot
Match: A0A2V3ICD1_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICD1_9FLOR)

HSP 1 Score: 124 bits (310), Expect = 1.330e-27
Identity = 101/280 (36.07%), Postives = 140/280 (50.00%), Query Frame = 0
Query:   89 LPRERKIRTSSDTDVPQALAPTPHSREIPFTGPEDPQPDSGLTTFATVVSPPPRLVDQARIVRLEEQLRSLRAAHNTLSREFTSLRGGLAYPPPSELAEDIRVLRSDVNTLLECFGALSSFAEGLENCFERLRSRLESVERTLTSPANVARPVVS------HRETQSRNRKSRKNRDSNRKHGHPSDXXXXXXXXXXXXXXXXXSVSDDPQDRYGRSSRSKRSSATYGAIRSRPKGRRHPGLKPLKPTNPLYRTLLSYRYYRLEDSSLGRTPLDTGKVKD 362
            LPR+      +D  VP +  P   +      GP DP   +     +          D+  +  LE Q+R L+++   L ++ T LR         +++ D+RVLR+DVNT++E      +  + +     RL +RLE+VE+T+   A      VS      HR T    RK  K  +     G  S             XXXXX    + + R   +SRSK + AT+GA+R+R KGR+H GLK LKPTN LYR LLSYRYYRLEDSS+ RT   TG+VKD
Sbjct:   34 LPRDALTMPGNDDPVPASRGPRSVNEVPEAQGPADPAMAAAQAMSSRS--------DEFTLRELEAQVRILQSSQVNLIQDITKLRTRFDDADVRDVSNDVRVLRADVNTVMEGRKVSGTLLQEVAERLNRLAARLETVEQTIIHDAVPPGAPVSEGSRKSHRATDRHRRKKVKMEE-----GLSSSSSSESDVRSHGSXXXXXXXXXNHRSR---ASRSKYTEATHGAVRTREKGRKHLGLKELKPTNLLYRKLLSYRYYRLEDSSMERTSRGTGRVKD 297          
BLAST of Gchil7708.t1 vs. uniprot
Match: A0A2V3IT91_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT91_9FLOR)

HSP 1 Score: 104 bits (260), Expect = 4.200e-22
Identity = 60/133 (45.11%), Postives = 85/133 (63.91%), Query Frame = 0
Query:  114 REIPFTGPEDPQPDSGLTTFATVVSPPPRLVDQARIVRLEEQLRSLRAAHNTLSREFTSLRGGLAYPPPSELAEDIRVLRSDVNTLLECFGALSSFAEGLENCFERLRSRLESVERTL-TSPANVARPVVSHR 245
            +E     PE+ +P +G   F TV SPPP L +QA+IV LEEQ  +++AAHN +  E TSL   +   P   + ++IR+LRSD+N +L+ FG  + F E +E  F+R+R RLESVE+ + TS A   +PVVS R
Sbjct:   39 KETTKATPENVKPGAGPAAFVTVGSPPPSLGEQAQIVPLEEQFLNMQAAHNAIVGELTSLGETVESYPVQGMGDEIRLLRSDINYMLDYFGIPAPFVEVIEKRFDRVRIRLESVEKAVYTSAAAAVKPVVSER 171          
The following BLAST results are available for this feature:
BLAST of Gchil7708.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IMI9_9FLOR5.110e-17049.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICD1_9FLOR1.330e-2736.07Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IT91_9FLOR4.200e-2245.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 149..169
NoneNo IPR availableCOILSCoilCoilcoord: 210..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 719..778
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..280
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..778
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:437370..439933 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7708.t1Gchil7708.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025321_pilon 437370..439933 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7708.t1 ID=Gchil7708.t1|Name=Gchil7708.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=779bp
MVNLALLPPFPFSFPFPPFHWAIPALAARTDTCRARHSRGFCLLRGYAST
ASADILGFFQPPCARPDGSAPAYTRHCTPIPGRALPRRLPRERKIRTSSD
TDVPQALAPTPHSREIPFTGPEDPQPDSGLTTFATVVSPPPRLVDQARIV
RLEEQLRSLRAAHNTLSREFTSLRGGLAYPPPSELAEDIRVLRSDVNTLL
ECFGALSSFAEGLENCFERLRSRLESVERTLTSPANVARPVVSHRETQSR
NRKSRKNRDSNRKHGHPSDSSSDSDGKPSDSESSDSSVSDDPQDRYGRSS
RSKRSSATYGAIRSRPKGRRHPGLKPLKPTNPLYRTLLSYRYYRLEDSSL
GRTPLDTGKVKDCIKRMELSLRNQSFTGDDPILVLDFLHRFVAEADILGM
NEGQAYVALPHFLRGVAEDQFLSVRGSSRASEGGVTCWPEAVQYLLRSYA
TNSAIQAAILALRDTRQRTGELETDYSVRLNKASHRCGNVYPAGERCTMF
IDGLDPAIKTLVAHYREQEPKVTYLELVQFARAEGDALRARNPGTWSKAT
KALLLESDSSSPSFATDGIPKQGYDNMNVIHHDGLSIPTTELPSTTDGSV
DSTARDTENGQVFYLNDRRTPAPRMPYSNGMTRSQRPGWVGNREPGRYTD
SRNAVLRNAGVTLVCNLCYERGHTSPQCLLSLRDMARVVDNYEALSPQEK
GSVPLTSYLRAKTDFPNALAHTPNSRYKPAQTARAAPAPNHAGGSQPAPA
VATVQRNHALVAEEVGPSPDQDPVQGKE*
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