Gchil7696.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7696.t1
Unique NameGchil7696.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length686
Homology
BLAST of Gchil7696.t1 vs. uniprot
Match: A0A2V3ITP9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITP9_9FLOR)

HSP 1 Score: 131 bits (329), Expect = 3.390e-29
Identity = 92/256 (35.94%), Postives = 133/256 (51.95%), Query Frame = 0
Query:    1 MNNAYYESMPRSSESARLLTTSSHAPVSERHVPRRFRVSLGFANVRAVLAIAALVATVLLVTDSSQFDRIYRRSRVSRVLPNLSTFWHRASLYADTQFPVRDFYND--FDADAPRIPYFPSQSFIRTDSSDENYSIEQSTPTYDCSVNLYCRARLVLTKNGTLTTVQVGYYIYSVDGDRSVVDA-TQQRVSAVTEAEATAWATQLLGKVNETLTEAKCEVSVSMVSDAIMKTKDDASKCPNTGDSLCSTLITVNEC 253
            M++  Y S+P++     +   S     S      RF        + ++L IAA +  V+ + ++   +        SR++P LST  +    + D        Y+D  F     R       S IR++  + +   +++ PT DCSV L+CRARLV+TKN    TVQ GYYIY+       + A T++RV AVT  EAT WA  LL ++   L E  C VSVSM++DAIM+TKD  + C NT DSLCS L+T+ EC
Sbjct:    1 MSSVGYNSIPQNPAPGNVTAASPLKHGSRNQANGRFSFPSVGRKLLSLLTIAAALVAVIFLVNNYVLELPRFSYHESRLVPRLSTSRNSNPFHFDAVHS--HLYSDRKFSHWKARSSVSLLHSAIRSNICEVDSVTQEAVPTRDCSVGLWCRARLVVTKNDAGITVQAGYYIYTKRSKTMPITAQTKKRVKAVTPNEATKWAETLLEQLGTKLGEVDCNVSVSMIADAIMETKDVVASCSNTDDSLCSELVTLREC 254          
BLAST of Gchil7696.t1 vs. uniprot
Match: A0A2V3IP66_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP66_9FLOR)

HSP 1 Score: 109 bits (272), Expect = 3.200e-21
Identity = 60/133 (45.11%), Postives = 79/133 (59.40%), Query Frame = 0
Query:  134 IEQSTPTYDCSVNLYCRARLVLTKNGTLTTVQVGYYIYSVDGDRSVVDATQQRVSAVTEAEATAWATQLLGKVNETLTEAKCEVSVSMVSDAIMKTKDDASKCPNTGDSLCSTLITVNECEDNPPDEEVVTEE 266
            +++   T DC+V   CRARLVL K     T++ GY I+    D  V   T++RV A T  EAT WAT LL K+ E + E  C+V+VSM++DAIMK+KDD  +CP T   LC+ L T+  C     DE   TEE
Sbjct:  138 LDERIGTRDCAVGRICRARLVLNKEEGEVTIRAGYNIFPKRKDIGVDRTTKRRVKATTRKEATKWATVLLSKIQEDMKELGCDVNVSMIADAIMKSKDDVVRCPRTDSPLCTPLETIKTC--TVLDERFETEE 268          
The following BLAST results are available for this feature:
BLAST of Gchil7696.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ITP9_9FLOR3.390e-2935.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IP66_9FLOR3.200e-2145.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..685
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..61
NoneNo IPR availableTMHMMTMhelixcoord: 40..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:324504..326729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7696.t1Gchil7696.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025321_pilon 324504..326729 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7696.t1 ID=Gchil7696.t1|Name=Gchil7696.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=686bp
MNNAYYESMPRSSESARLLTTSSHAPVSERHVPRRFRVSLGFANVRAVLA
IAALVATVLLVTDSSQFDRIYRRSRVSRVLPNLSTFWHRASLYADTQFPV
RDFYNDFDADAPRIPYFPSQSFIRTDSSDENYSIEQSTPTYDCSVNLYCR
ARLVLTKNGTLTTVQVGYYIYSVDGDRSVVDATQQRVSAVTEAEATAWAT
QLLGKVNETLTEAKCEVSVSMVSDAIMKTKDDASKCPNTGDSLCSTLITV
NECEDNPPDEEVVTEEAVPTGDCSGGLFCRARLVLTTKGTSTTVQAGYYI
YPVSTRREVDLSTRRRVKAVTQAEAMTWANQLVDKLEPKLAEVDCQLDAS
KIADAIMKTKDDATNCLNTGDSLCSTLITVNECEDNPPDEEVVTEEAVPT
GDCSGGLFCRARLVLTTKGTSTTVQAGYYIYPVSTRRKVDRSTRRRVKAV
TQAEAMKWANQLVDKLEPKLAEVDCQLDASKIADAIMSTKQDAFKCHNTE
SSLCSELVNLECEAEAEEDVESKCYKFFQSDSPVDTFDQLVAECPDAKLV
HGFITVTLPLCSYACPSDPSRRHTFESKFVVQTSRAADIRTYGIDFTSLM
RPVYKDYVSPLPNCEDTPTRIPKGGKYFTTFYNIVKHKHVPENLAHIEEH
MADCNTVVDGVPTCRVYCPRPVLGHRSQGQAGRRG*
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