Gchil7687.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7687.t1
Unique NameGchil7687.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length423
Homology
BLAST of Gchil7687.t1 vs. uniprot
Match: A0A2V3IGK2_9FLOR (Collagen alpha-1(XXVIII) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGK2_9FLOR)

HSP 1 Score: 198 bits (504), Expect = 2.520e-56
Identity = 93/143 (65.03%), Postives = 111/143 (77.62%), Query Frame = 0
Query:  282 CEMAFDECEFTFKGETGLATFRTDGPADKSFTPVIVAKNPDVNLGVLNSNNIVPEFIDDSGAFPITDFGSQRFAPTQFKPLYIWQEQGSGIGHQTFHADQGELAKGRCLRIYFTEIQLV--DPYFNLNQVPRSENKCVVFRTE 422
            C  AFDECEFTF+G+TGL+TF   G  D+SFTP IV+K+  V LGVLNSNNIVPEFI+D+G FPIT+FGSQRF PT FKP  +   QGSGIGHQTFH +Q ++AK RC+R+YFT  Q +  +   N N VPRSENKCVVFRT+
Sbjct:  211 CSKAFDECEFTFRGKTGLSTFSIAGRPDRSFTPRIVSKDASVRLGVLNSNNIVPEFIEDNGVFPITNFGSQRFTPTHFKPYTLMNGQGSGIGHQTFHGNQKQVAKDRCIRVYFTHFQEIRNNKLINRNDVPRSENKCVVFRTQ 353          
BLAST of Gchil7687.t1 vs. uniprot
Match: A0A2V3IQI6_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQI6_9FLOR)

HSP 1 Score: 162 bits (410), Expect = 1.820e-42
Identity = 80/146 (54.79%), Postives = 99/146 (67.81%), Query Frame = 0
Query:  282 CEMAFDECEFTFKGETGL--ATFRTDGPADKSFTPVIVAKNPDVNLGVLNSNNIVPEFIDDSGAFPITDFGSQRFAPTQFKPLYIWQEQGSGIGHQTFHADQGELAKGRCLRIYFTEIQLVDP---YFNLNQVPRSENKCVVFRTE 422
            CE A+D+C F F G  G   A F   G  DKSFTP +V K    +LG LN+NN+VPEFI+ +   PIT+FGSQRF PT FKP +I +E+GSG+GHQTF  +Q E+A  +C+R+YFT  Q V P     N N VP SENKCVVFRT+
Sbjct:  214 CEKAYDKCLFKFSGVNGFNNAIFSIAGEPDKSFTPRVVPKATTYSLGTLNTNNVVPEFIEGNQGRPITEFGSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLEVANDKCVRVYFTSFQEVPPNGQVVNRNNVPTSENKCVVFRTK 359          
BLAST of Gchil7687.t1 vs. uniprot
Match: A0A2V3IGH1_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGH1_9FLOR)

HSP 1 Score: 149 bits (376), Expect = 1.510e-37
Identity = 74/146 (50.68%), Postives = 97/146 (66.44%), Query Frame = 0
Query:  282 CEMAFDECEFTFKG--ETGLATFRTDGPADKSFTPVIVAKNPDVNLGVLNSNNIVPEFIDDSGAFPITDFGSQRFAPTQFKPLYIWQEQGSGIGHQTFHADQGELAKGRCLRIYFTEIQLVDP---YFNLNQVPRSENKCVVFRTE 422
            CE A+++C F F G  +   A F   G  DKS TP +V K    +LG LN+NN+VPEFI+++    IT+FGSQRF PT FKP +I +E+GSG+GHQTF  +Q ELA  +C+R+YFT  Q +       N N VP SE+KCVVFRT+
Sbjct:  215 CEKAYNKCLFKFSGIDDFNNAIFSIAGEPDKSMTPQVVPKATTYSLGTLNTNNVVPEFIEENQVSLITEFGSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLELANDKCVRLYFTSFQEISQNGQVVNRNNVPTSEHKCVVFRTK 360          
BLAST of Gchil7687.t1 vs. uniprot
Match: A0A2V3IP66_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP66_9FLOR)

HSP 1 Score: 140 bits (352), Expect = 1.110e-32
Identity = 75/158 (47.47%), Postives = 105/158 (66.46%), Query Frame = 0
Query:  272 PSPSPIPL-DSCEMAFDECEFTFKGETGLATFRTDGPADKSFTPVIVAKNPDVNLGVLNSNNIVPEFIDDSGAFP-ITDF-GSQRFAPTQFKPLYIWQEQGSGIGHQTFHADQGELAKGRCLRIYFTEIQLVD--PYFNL--NQVP-RSENKCVVFRT 421
            P+P+P P+ D C+ A+D C F F  ET +  F  DGP + +F+PVI ++N + NLGVLNSNN+  E  +  G +  IT    SQ F+ TQFKP  +   +GSGIGH+TF ADQ E+ +GRC+R++F+  QL++  P FN+  N V  R +NKCVVF+T
Sbjct:  444 PTPTPEPVVDKCQQAYDLCGFYFGNETDVPVFSVDGPDNVAFSPVIESRNDNENLGVLNSNNLEVEIFEGDGNYVGITSLPASQTFSRTQFKPFSLSNTKGSGIGHETFQADQREVIRGRCVRVFFSHFQLLELTPPFNVVGNVVAGREDNKCVVFKT 601          
BLAST of Gchil7687.t1 vs. uniprot
Match: A0A2V3J5W6_9FLOR (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W6_9FLOR)

HSP 1 Score: 133 bits (335), Expect = 1.140e-30
Identity = 70/155 (45.16%), Postives = 97/155 (62.58%), Query Frame = 0
Query:  276 PIPLDSCEMAFDECEFTFKGETGLATFRTDGPADKSFTPVIVAKNPDVNLGVLNSNNIVPEFIDDSGAFPITDF--GSQRFAPTQFKPLYIWQEQGSGIGHQTFHADQGELAKGRCLRIYFTEIQLVDP------YFNLNQVPRSENKCVVFRTE 422
            P  LD+CE A+ +C+F F     + TF   G  DK FTP IV++ P V +GVLN+N I+PEFI+  G+  +         FAPTQFKPL I  + GSG+G+QTF  +Q   A+ RC+R++FT  QL++P        N+N   R++NKCVVFRT+
Sbjct:  372 PPTLDACEQAYQDCDFAFFDTPVVPTFTLGGNPDKPFTPRIVSRIPGVVVGVLNTNGIIPEFIESDGSVDLITSTPAIPMFAPTQFKPLSIPDDIGSGVGYQTFQGNQLVEARNRCVRLFFTSFQLLEPTPPFSVIANIN-ADRTDNKCVVFRTD 525          
BLAST of Gchil7687.t1 vs. uniprot
Match: A0A2V3IFK7_9FLOR (Collagen alpha-6(VI) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK7_9FLOR)

HSP 1 Score: 130 bits (328), Expect = 1.390e-30
Identity = 73/156 (46.79%), Postives = 100/156 (64.10%), Query Frame = 0
Query:  273 SPSPIPLDSCEMAFDECEFTFKGETGLATFRTDGPADKSFTPVIVAKNPDVNLGVLNSNNIVPEFIDDSGAF-PITDFGS-QRFAPTQFKPLYIWQEQGSGIGHQTFHADQGELAKGRCLRIYFTEIQLVD--PYFNL---NQVPRSENKCVVFRT 421
            +P+PIP D CE A+D C+F F  E  + TF  D   D  FTP IV++NP   +GVLN+N+IV EFI+D G   PIT   + Q F+ TQFKP+ +     SGI H++F ADQ  LA+ RC+R++ +  QL+D  P  N+     V R++NKC+VFRT
Sbjct:  223 TPTPIP-DPCEEAYDTCDFAFMNELSVPTFAVDVAPDVPFTPKIVSRNPLELVGVLNTNDIVVEFIEDDGTVTPITSEPAIQSFSATQFKPITLTGTSRSGIAHESFQADQLSLARDRCVRVFVSSFQLLDVTPPNNVIGNPAVTRADNKCMVFRT 377          
BLAST of Gchil7687.t1 vs. uniprot
Match: A0A2V3ID41_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID41_9FLOR)

HSP 1 Score: 108 bits (270), Expect = 2.360e-24
Identity = 62/152 (40.79%), Postives = 87/152 (57.24%), Query Frame = 0
Query:  280 DSCEMAFDECEFTFKGETGLATFRTDGPADKSFTPVIVAKNPDVNLGVLNSNNIVPEFIDDSGAFPITDFGSQRFAP--TQFKPLYIWQEQGSGIGHQTFHADQGELAKGRCLRIYFTEIQLV---DP----YFNLNQVPR-SENKCVVFRT 421
            D C++A+D+C+  F+G   + +F  DGPAD+SFTP IV++NP   +GV+ SN I P+FI     + +  F      P  T FKP  +    GSGIGH+ F    G  A+G C+R+Y T  QL+   +P      NLN+     + KCVVFRT
Sbjct:   26 DWCQLAYDDCKLKFEGHDNVPSFSLDGPADESFTPQIVSRNPGERIGVVTSNGIPPQFI--LSGYNVRPFNFYYRVPSLTLFKPYTLPHRIGSGIGHEHF---DGNFARGSCIRVYITNYQLLVAENPPSVRNINLNRREALDQGKCVVFRT 172          
BLAST of Gchil7687.t1 vs. uniprot
Match: A0A2V3IQU1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQU1_9FLOR)

HSP 1 Score: 105 bits (262), Expect = 3.780e-21
Identity = 71/187 (37.97%), Postives = 102/187 (54.55%), Query Frame = 0
Query:   90 SGVLWKVPNGYSYYQSHRPGVIGSFSRYPNIAFRPLSTLSMAYLNRQDAA---QEVEDQVIEEGVGTRDCGAWLLCRARLIVTKEGNDVTIQVGYNISGVGGVDRPVDRGTMARVSAVSPEEALIWTTMLLGRVHDLLGEVNCTANAVGAAEALLVTSTVAASCPSTHDPSCHKLITVEHCTIAAPS 273
            SGV     + Y++YQ+ RP    ++S+   +A    S+  +  + R D++     VED V+E+ + T DC    LCRAR+IV+KEGN VTI+ GY I    GV  P++  T   V  V+  EA IW   LL ++   L +V C   A   A+ ++ T   AASCP T  P C +L  ++ CTIA PS
Sbjct:  105 SGVTPDTFSSYNWYQTQRP----AYSKAYGVA--KTSSSFLPPVTRADSSCGTGTVEDFVVEKRISTGDCNGGRLCRARVIVSKEGNQVTIKSGYYIFRNKGVT-PLNPYTRRNVKKVTRREATIWAQNLLSKIQSDLDKVQCPVTADMIADGIMNTKDDAASCPRTDHPLCSRLFLLKTCTIAEPS 284          
The following BLAST results are available for this feature:
BLAST of Gchil7687.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IGK2_9FLOR2.520e-5665.03Collagen alpha-1(XXVIII) chain n=1 Tax=Gracilariop... [more]
A0A2V3IQI6_9FLOR1.820e-4254.79VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IGH1_9FLOR1.510e-3750.68VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IP66_9FLOR1.110e-3247.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5W6_9FLOR1.140e-3045.16Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis... [more]
A0A2V3IFK7_9FLOR1.390e-3046.79Collagen alpha-6(VI) chain n=1 Tax=Gracilariopsis ... [more]
A0A2V3ID41_9FLOR2.360e-2440.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQU1_9FLOR3.780e-2137.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..422
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..66
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:132839..134107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7687.t1Gchil7687.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025321_pilon 132839..134107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7687.t1 ID=Gchil7687.t1|Name=Gchil7687.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=423bp
MDSILSHGGPYYYSIPVVSTSSPRQASLRNAVYHQMTRLSRSSSISRLFK
TVSVFTLIAASVFFLSSQCISCHFLHFKNRIYNFAAYGQSGVLWKVPNGY
SYYQSHRPGVIGSFSRYPNIAFRPLSTLSMAYLNRQDAAQEVEDQVIEEG
VGTRDCGAWLLCRARLIVTKEGNDVTIQVGYNISGVGGVDRPVDRGTMAR
VSAVSPEEALIWTTMLLGRVHDLLGEVNCTANAVGAAEALLVTSTVAASC
PSTHDPSCHKLITVEHCTIAAPSPSPIPLDSCEMAFDECEFTFKGETGLA
TFRTDGPADKSFTPVIVAKNPDVNLGVLNSNNIVPEFIDDSGAFPITDFG
SQRFAPTQFKPLYIWQEQGSGIGHQTFHADQGELAKGRCLRIYFTEIQLV
DPYFNLNQVPRSENKCVVFRTE*
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