Gchil7686.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7686.t1
Unique NameGchil7686.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length159
Homology
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BLAST of Gchil7686.t1 vs. uniprot
Match: A0A2V3ID60_9FLOR (Cartilage matrix protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID60_9FLOR)

HSP 1 Score: 98.2 bits (243), Expect = 2.030e-22
Identity = 61/160 (38.12%), Postives = 86/160 (53.75%), Query Frame = 0 
Query:    1 MEKSFVIDVTSIVAAFH--NATYSAVQYGLQSYQISSPTQDINEFLLGVHGTRLRGDPKSSLGAGIEHCFFELANARQGVSKIVLIGDGRHNHGRDPMISARIFKQFFGENGSLSVINVGHSNLEYMTDLANAGGGDVFPIDDFIGLPFFIDDIVFDICG 158
            M+K FV  + S V  F   N+++SAVQYG Q   IS  TQ I++F L VH + +     SS+G GI +C  +L        KI++ GDGR     D +  A  FK F   NG LS + VG  N   +  +A AGGG +F ID++I     + D+  ++CG
Sbjct:   65 MQKDFV-QLMSAVLDFEVENSSFSAVQYGDQVSPISPLTQSIDDFNLKVHASNISAFQGSSIGKGITYCSNQLLELADNPVKIIVFGDGRETSKTDAVSIAASFKDFH-PNGRLSTVGVGFPNTVLLKTIAEAGGGRLFEIDEYIDALDLVVDLFLEVCG 222
The following BLAST results are available for this feature:
BLAST of Gchil7686.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ID60_9FLOR2.030e-2238.13Cartilage matrix protein n=1 Tax=Gracilariopsis ch... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 1..158
e-value: 6.1E-10
score: 41.0
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 6..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:75287..75763 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7686.t1Gchil7686.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025321_pilon 75287..75763 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7686.t1 ID=Gchil7686.t1|Name=Gchil7686.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=159bp
MEKSFVIDVTSIVAAFHNATYSAVQYGLQSYQISSPTQDINEFLLGVHGT
RLRGDPKSSLGAGIEHCFFELANARQGVSKIVLIGDGRHNHGRDPMISAR
IFKQFFGENGSLSVINVGHSNLEYMTDLANAGGGDVFPIDDFIGLPFFID
DIVFDICG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036465vWFA_dom_sf