Gchil7574.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7574.t1
Unique NameGchil7574.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length252
Homology
BLAST of Gchil7574.t1 vs. uniprot
Match: A0A2V3ITL5_9FLOR (PsbP domain-containing protein 2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITL5_9FLOR)

HSP 1 Score: 298 bits (764), Expect = 5.520e-100
Identity = 146/189 (77.25%), Postives = 170/189 (89.95%), Query Frame = 0
Query:   63 ERRTFLHLVALAAFSALPLSEAAFAEQQTFQTYNGPLSLGFSFSYPSNWSVKKKPIKTHLSEVIVTSDKDAATTAGLVVDSVKLSSIESFGTPQQVGEKVLAVETKKESVNNATIQSASSETRNGLTYYTLDYTVDSSRGIKRYIAKVTVTGGQLYVLTTQAKVDNFDDQTTETFEKMLDSFSVKKQYT 251
            +RRTFLHL AL+AFS LP+S+  FAEQ  F TY GP+SLGFSF+YPSNW+VKKKPIKTHLSEVIVTSDKD ATTAGLVVD+VK+ +IE FGTP+ VG KV+ VETKKE+VN+AT+QSASSET++GL YYTLDYTVDSSRG+KRY+AKVTVTGGQLYVLT QA+VD FD +T+E F+KMLDSF+VKKQYT
Sbjct:   14 DRRTFLHLAALSAFSVLPISDGVFAEQTEFSTYMGPISLGFSFAYPSNWAVKKKPIKTHLSEVIVTSDKDPATTAGLVVDTVKIDTIEKFGTPEVVGNKVVQVETKKENVNSATVQSASSETKDGLVYYTLDYTVDSSRGVKRYLAKVTVTGGQLYVLTAQARVDKFDKETSENFDKMLDSFNVKKQYT 202          
BLAST of Gchil7574.t1 vs. uniprot
Match: A0A7S0BSD6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BSD6_9RHOD)

HSP 1 Score: 146 bits (368), Expect = 8.430e-40
Identity = 83/197 (42.13%), Postives = 119/197 (60.41%), Query Frame = 0
Query:   55 ADKDSAKTERRTFLHLVALAAFSALPLSEAAFAEQQTFQ-TYNGPLSLGFSFSYPSNWSVKKKPIKTHLSEVIVTSDKDAATTAGLVVDSVKLSSIESFGTPQQVGEKVLAVETKKESVNNATIQSASSETRNGLTYYTLDYTVDSSRGIKRYIAKVTVTGGQLYVLTTQAKVDNFDDQTTETFEKMLDSFSVKKQY 250
            A  +  K  RR  L     A   +L +     AE++T +  + GP SLG++F YP  W+  KK IKTH SEV+V  D  +A   GLVVD VK++S++ FG+P+QV +KVL VE KK+   +    +  S  R+GLTYY ++Y V+++RG+KRYI+++T+    LYV T QAK+ +F     E   K+L S  VKK Y
Sbjct:   26 AGGERVKVSRREVLF--GAAGLVSLSVGGEVLAEEETSELVWKGPSSLGYTFKYPPAWTATKKQIKTHASEVLVVKDGTSAQV-GLVVDPVKINSLKEFGSPEQVADKVLGVEKKKDGTLSVRTLALGSFDRDGLTYYDIEYEVENTRGMKRYISRLTINDKNLYVFTGQAKIADFSSSEAE-LRKVLSSLYVKKSY 218          
BLAST of Gchil7574.t1 vs. uniprot
Match: A0A7S0XME8_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XME8_9RHOD)

HSP 1 Score: 145 bits (365), Expect = 2.510e-39
Identity = 85/203 (41.87%), Postives = 123/203 (60.59%), Query Frame = 0
Query:   64 RRTFLHLV-ALAAFSALPLS----------EAAFAEQQTFQTYNGPLSLGFSFSYPSNWSVKKKPIKTHLSEVIVTSDKDAATTA----GLVVDSVKLSSIESFGTPQQVGEKVLAVETKKESVNNATIQSASSETRNGLTYYTLDYTVDSSRG-IKRYIAKVTVTGGQLYVLTTQAKVDNFDDQTTETFEKMLDSFSVKKQY 250
            RRT L L  AL A SA+             EAA   QQ F  Y GPL LG+SF YP+ WSV KK +KTH++E++++  K +        G+VVD VK++S+  FG+   VG +V+ +E KK+ V++A++ SA    ++GLTYY L+Y +D+S G  K ++A  T+TG  LYVLTTQA+  +F+  +      ++ SF VK QY
Sbjct:   19 RRTMLRLAGALVAVSAVRFGSDDRGMVHAEEAAPVVQQEFTRYQGPLGLGYSFEYPTGWSVGKKTVKTHMNELVMSPAKKSEGAVRGGGGIVVDPVKINSVSEFGSADAVGNRVIELEKKKDGVSSASLVSAKELQKDGLTYYELEYVIDTSHGGEKHFLAASTITGKNLYVLTTQARTADFN-ASEPALRHVISSFRVKPQY 220          
BLAST of Gchil7574.t1 vs. uniprot
Match: A0A1X6PDH3_PORUM (PsbP domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PDH3_PORUM)

HSP 1 Score: 141 bits (356), Expect = 3.230e-36
Identity = 77/156 (49.36%), Postives = 99/156 (63.46%), Query Frame = 0
Query:   95 YNGPLSLGFSFSYPSNWSVKKKPIKTHLSEVIVTSDKDAATTAGLVVDS-VKLSSIESFGTPQQVGEKVLAVETKKESVNNATIQSASSETR-------------------NGLTYYTLDYTVDSSRGIKRYIAKVTVTGGQLYVLTTQAKVDNFD 230
            Y GPLSLG+SF YP+ WS  KKPIKTHLSEVIV++ K ++ + GLVVD  +K+ SIE FGTP  VG KVLA+E KK+S  +  +   +SET                    NG+ Y  ++Y VDSSRG+K ++AK TV  GQLYV+T   K D F+
Sbjct:  226 YVGPLSLGYSFRYPTTWSANKKPIKTHLSEVIVSAPKGSSASVGLVVDGPLKIGSIEEFGTPDAVGAKVLALERKKDSTKDVRLVRTASETLGVGGGAAAAAGVGQPAGLGNGVAYI-VEYVVDSSRGVKHFVAKATVAAGQLYVMTATCKEDEFE 380          
BLAST of Gchil7574.t1 vs. uniprot
Match: A0A7S0QHT9_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QHT9_9CRYP)

HSP 1 Score: 125 bits (313), Expect = 3.830e-32
Identity = 58/128 (45.31%), Postives = 88/128 (68.75%), Query Frame = 0
Query:  102 GFSFSYPSNWSVKKKPIKTHLSEVIVTSDKDAATTAGLVVDSVKLSSIESFGTPQQVGEKVLAVETKKESVNNATIQSASSETRNGLTYYTLDYTVDSSRGIKRYIAKVTVTGGQLYVLTTQAKVDNF 229
            GFS  YP+ W   +KP+KTHL EV + SD    T  G+ VD VK+ ++ +FGTP QVG++V+A+E  K+ V +A + +   E R+G+ YYT++Y  +S+RG +R++AKV +   +L+VLT QAK D+F
Sbjct:   30 GFSVDYPAAWRASQKPVKTHLEEVNLLSDTSKGTELGVSVDPVKIDTVTAFGTPLQVGKRVVALERSKDGVLSAKLIAVGQEDRDGVPYYTIEYASESTRGNRRFLAKVAIVRRRLFVLTAQAKTDSF 157          
BLAST of Gchil7574.t1 vs. uniprot
Match: A0A7J7IQB6_9RHOD (PsbP domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQB6_9RHOD)

HSP 1 Score: 124 bits (312), Expect = 5.730e-31
Identity = 68/152 (44.74%), Postives = 100/152 (65.79%), Query Frame = 0
Query:  100 SLGFSFSYPSNWSVKKKPIKTHLSEVIVTSDKDAATTAGLVVDSVKLSSIESFGTPQQVGEKVLAVETKKESVNNATIQSASS---ETRNGLTYYTLDYTVDSSRGIKR-YIAKVTVTGGQLYVLTTQAKVDNFDDQTTETFEKMLDSFSVK 247
            S G  F YPS W V+ KPIKTH  E++V  D + +T+ G+V DSV++  IE+FGT   +GE+V+A+E KK+ V +A +  A+    + RN LTYY  +Y V+S+RG +R Y AKVT+TG QLYV+T Q+K + +       F  +L+SF ++
Sbjct:  112 STGVRFRYPSGWRVRTKPIKTHAFEILVVCDTEPSTSIGVVSDSVRIERIENFGTASDIGERVVALERKKDGVLSAELVRATQYPVKDRNPLTYYLCEYRVNSARGGERHYAAKVTITGKQLYVMTVQSKENQWGFYEP-LFRDVLESFEIE 262          
BLAST of Gchil7574.t1 vs. uniprot
Match: A0A7S4FYE0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FYE0_9EUGL)

HSP 1 Score: 125 bits (313), Expect = 2.590e-30
Identity = 73/177 (41.24%), Postives = 101/177 (57.06%), Query Frame = 0
Query:   70 LVALAAFSALPLSEAAFAEQQTFQTYNGPLSLGFSFSYPSNWSVKKKPIKTHLSEVIVTSDKDAATTAGLVVDSVKLSSIESFGTPQQVGEKVLAVETKKESVNNATIQSASSETRNGLTYYTLDYTVDSSRGIKRYIAKVTVTGGQLYVLTTQAKVDNFDDQTTETFEKMLDSFSV 246
            L A AA +  P    A  +  T Q  NG     ++F YPS+W V KKP+KTH  E+ V S      T G+ VD +KL+S+E FG P  V E+V+ VE  K  V    +  A++  R+GL+YYT++Y VDS RG   Y+AK+TV  G LYVLT + K D   ++     +K+LD+  V
Sbjct:  180 LPAAAALATPPRMAFAAEDLTTAQVDNGR----WAFDYPSDWEVIKKPLKTHFQELEVKSPTIKKCTVGIAVDPIKLASLEKFGDPTFVAERVVNVERNKNGVREVKLLDAANAPRDGLSYYTMEYEVDSERGYYHYLAKLTVANGFLYVLTAKVK-DGSWEEGRPAVQKILDTMQV 351          
BLAST of Gchil7574.t1 vs. uniprot
Match: A0A7S0LET4_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LET4_9EUKA)

HSP 1 Score: 115 bits (288), Expect = 6.110e-28
Identity = 70/204 (34.31%), Postives = 121/204 (59.31%), Query Frame = 0
Query:   40 RSRFAVPSMNASRHNADKDSAKTERRTFLH---LVALAAFSALPLSEAAFAEQQTFQTYNGPLSLGFSFSYPSNWSVKKKPIKTHLSEVIVTSDKDAATTAGLVVDSVKLSSIESFGTPQQVGEKVLAVETKKESVNNATIQSASSETRNGLTYYTLDYTVDSSRGIKRYIAKVTVTGGQLYVLTTQAKVDNFDDQTTETFEKM 240
            R R ++P   A+  +    +A     + L    L++ A  +  PL + A A + T +T      L +S SYPS W+  +KP+KTHLSE ++ S +   +  G+ VD VK+ S+E+FGTP++V ++VLAVE  ++ V +  ++S +++     +YYT++Y V+S+RG K Y+ K  +   +LYVL TQAKV ++D   ++  +++
Sbjct:    5 RMRVSLPPSQATAFSTAAPAATRLDESVLRRSLLISAAVLAGSPLVQRAIALE-TSETLADERFL-YSLSYPSGWNPTQKPVKTHLSEALLNSPRKGVSL-GVTVDPVKIDSLEAFGTPEEVADRVLAVEEGRDGVLDVQLRSLAADAGKP-SYYTIEYFVESTRGKKVYLCKYCIAQKRLYVLQTQAKVVDYDSAASDVQQQL 204          
BLAST of Gchil7574.t1 vs. uniprot
Match: A0A7S2WW61_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW61_9STRA)

HSP 1 Score: 107 bits (267), Expect = 9.640e-25
Identity = 53/134 (39.55%), Postives = 84/134 (62.69%), Query Frame = 0
Query:  103 FSFSYPSNWSVKKKPIKTHLSEVIVTSDKDAATTAGLVVDSVKLSSIESFGTPQQVGEKVLAVETKKESVNNATIQSAS-SETRNGLTYYTLDYTVDSSRGIKRYIAKVTVTGGQLYVLTTQAKVDNFDDQTTE 235
            + FSYP+ ++V  KP+KTHL EV V S+     +AGL VD +K+ S+E+FG P  VG +V+ VE +K+ V +A +  A  ++   G+ YY LDY  +S+RG  R+++++ +  G+L+V T Q K  +F     E
Sbjct:   83 YEFSYPAGFAVTSKPLKTHLVEVNVKSEAVRGYSAGLAVDPIKIPSLEAFGDPTTVGNRVVGVERRKDGVLSADLVGAERAQDARGIVYYDLDYVAESTRGNNRFLSRIAIREGKLHVFTVQTKQADFGSVEAE 216          
BLAST of Gchil7574.t1 vs. uniprot
Match: A0A7S1NMT3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NMT3_9EUGL)

HSP 1 Score: 109 bits (272), Expect = 1.730e-24
Identity = 54/125 (43.20%), Postives = 77/125 (61.60%), Query Frame = 0
Query:  103 FSFSYPSNWSVKKKPIKTHLSEVIVTSDKDAATTAGLVVDSVKLSSIESFGTPQQVGEKVLAVETKKESVNNATIQSASSETRNGLTYYTLDYTVDSSRGIKRYIAKVTVTGGQLYVLTTQAKVD 227
            +SF+YP +W V  K +KTH  E+ V S      T G+ VD +KL S+E+FG P  VGE+V+AV+ K+E V   T+  A +  ++G TYY LDY   + RG   Y+AKV V  G L+V+T + + D
Sbjct:  199 WSFTYPPDWEVSNKLVKTHFQELEVKSTTIKKCTVGIAVDPIKLDSLENFGDPDFVGERVVAVDRKREGVTEVTLNGAYNTPKDGQTYYLLDYQSKTERGDYHYLAKVAVDKGFLFVMTAKVRED 323          
The following BLAST results are available for this feature:
BLAST of Gchil7574.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITL5_9FLOR5.520e-10077.25PsbP domain-containing protein 2, chloroplastic n=... [more]
A0A7S0BSD6_9RHOD8.430e-4042.13Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0XME8_9RHOD2.510e-3941.87Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A1X6PDH3_PORUM3.230e-3649.36PsbP domain-containing protein n=1 Tax=Porphyra um... [more]
A0A7S0QHT9_9CRYP3.830e-3245.31Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7J7IQB6_9RHOD5.730e-3144.74PsbP domain-containing protein n=1 Tax=Cyanidiococ... [more]
A0A7S4FYE0_9EUGL2.590e-3041.24Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S0LET4_9EUKA6.110e-2834.31Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S2WW61_9STRA9.640e-2539.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1NMT3_9EUGL1.730e-2443.20Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 92..246
e-value: 5.4E-24
score: 85.1
NoneNo IPR availableGENE3D3.40.1000.10Mog1/PsbP, alpha/beta/alpha sandwichcoord: 80..246
e-value: 3.0E-35
score: 123.6
NoneNo IPR availablePANTHERPTHR31407FAMILY NOT NAMEDcoord: 40..247
NoneNo IPR availablePANTHERPTHR31407:SF3PSBP DOMAIN-CONTAINING PROTEIN 2, CHLOROPLASTICcoord: 40..247
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 102..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:2060979..2061734 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7574.t1Gchil7574.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 2060979..2061734 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7574.t1 ID=Gchil7574.t1|Name=Gchil7574.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=252bp
MPPPPAFISNAFRPPPKMDIVKFSVQNASPTIPLLAKLSRSRFAVPSMNA
SRHNADKDSAKTERRTFLHLVALAAFSALPLSEAAFAEQQTFQTYNGPLS
LGFSFSYPSNWSVKKKPIKTHLSEVIVTSDKDAATTAGLVVDSVKLSSIE
SFGTPQQVGEKVLAVETKKESVNNATIQSASSETRNGLTYYTLDYTVDSS
RGIKRYIAKVTVTGGQLYVLTTQAKVDNFDDQTTETFEKMLDSFSVKKQY
T*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002683PsbP_C
IPR016123Mog1/PsbP_a/b/a-sand