Gchil7566.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7566.t1
Unique NameGchil7566.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length200
Homology
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BLAST of Gchil7566.t1 vs. uniprot
Match: A0A2V3ITM2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITM2_9FLOR)

HSP 1 Score: 207 bits (528), Expect = 1.040e-62
Identity = 105/170 (61.76%), Postives = 134/170 (78.82%), Query Frame = 0 
Query:   28 SKVVLEQLTASKGNEIQAVQRIKQRLPEGPYFPGLRRPFDYEELCSFVRALEERGKNFENISRFLLRERSTSELIWMYYARHKQLRMQSFSRLREEQFKDNGTNMLKSIPISNERVINAVRCHAISAGDGFPLEYRVHKALSTYRQCVAERELRRRNDEALRRPTRLRNR 197
            ++V LEQLTA KGNEIQA QR+K+RLPEGPYFPGL+  F+Y+ELCSFVRALEERGK+FE ISR LL ERSTSEL+WMYY RHKQLRMQS+  L ++QFK++    +KS+ I+ ER + A+R  A  AGDGFPL+ RV  + +  R+ + ERE +RR +E+L++  RLRNR
Sbjct:  207 TEVALEQLTACKGNEIQAAQRVKERLPEGPYFPGLQHSFNYDELCSFVRALEERGKDFELISRCLLPERSTSELVWMYYTRHKQLRMQSYIGLSDDQFKEDNGEAIKSLAITAERALEAIRGQAAYAGDGFPLDSRVQLSFAACRRGIMERERKRRLEESLKQTPRLRNR 376
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BLAST of Gchil7566.t1 vs. uniprot
Match: R7QRB0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRB0_CHOCR)

HSP 1 Score: 140 bits (354), Expect = 9.440e-37
Identity = 79/189 (41.80%), Postives = 117/189 (61.90%), Query Frame = 0 
Query:    8 LQNWRVETRSLEPKLAAVEKSKVVLEQLTASKGNEIQAVQRIKQRLPEGPYFPGLRRPFDYEELCSFVRALEERGKNFENISRFLLRERSTSELIWMYYARHKQLRMQSFSRLREEQFKDNGTNMLKSIPISNERVINAVRCHAISAGDGFPLEYRVHKALSTYRQCVAERELRRRNDEALRRPTRLRN 196
            L+N  V+ R  +    A   ++V L +L   +G+ +QA++   + LP GP+FPG++  F YEE C FVR+L ER K F  ISR +L  RSTSEL+WMYY RHKQL MQ+   ++     D+G   LK + +  ER+++++R  A +AGDGFP++ RV +A+   R+ + +R  + R  E  RR  RLRN
Sbjct:  194 LRNVNVKKRRRDGFPLAPYATEVALTKLYGLRGDPVQALKTAMRALPRGPFFPGIKGYFKYEEQCIFVRSLAERSKEFGQISREILPHRSTSELVWMYYTRHKQLTMQN-GGIKNGLVLDDGGEKLKRVELRTERMVSSLRNLATTAGDGFPVDSRVERAVLACRRVMVQRRKKARETEMYRRVPRLRN 381
The following BLAST results are available for this feature:
BLAST of Gchil7566.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ITM2_9FLOR1.040e-6261.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QRB0_CHOCR9.440e-3741.80Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 63..124
e-value: 9.9E-9
score: 36.8
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 65..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:2044006..2045080 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7566.t1Gchil7566.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 2044006..2045080 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7566.t1 ID=Gchil7566.t1|Name=Gchil7566.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=200bp
MRQKLRSLQNWRVETRSLEPKLAAVEKSKVVLEQLTASKGNEIQAVQRIK
QRLPEGPYFPGLRRPFDYEELCSFVRALEERGKNFENISRFLLRERSTSE
LIWMYYARHKQLRMQSFSRLREEQFKDNGTNMLKSIPISNERVINAVRCH
AISAGDGFPLEYRVHKALSTYRQCVAERELRRRNDEALRRPTRLRNRDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf