Gchil7539.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7539.t1
Unique NameGchil7539.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length625
Homology
BLAST of Gchil7539.t1 vs. uniprot
Match: A0A2V3J585_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J585_9FLOR)

HSP 1 Score: 608 bits (1569), Expect = 6.570e-210
Identity = 310/552 (56.16%), Postives = 414/552 (75.00%), Query Frame = 0
Query:   68 EVDKIARSLANAKNRYERISDEVRALHELPDDYILGADLSDLYIGATSIVQDFPVPDAPAFHGLSPREVLTIAEDFLRGMEVSNEDRTSLMEGLKNILISLRNWVSDIKEEAKLLVLAQEDMEAENDPIPMTAFVHLLQLGRFSIMPSLPTIDEPPPPELIPLGTSKEETLDTSIIINHDVRNIVVKQQ-CDLRKESFYPYVFVATRGVSVMRNSGLLLSLKFRAIERSYLGWIAVPFTLLTKPSRVFDWVKSWLSDPKKDPKRSINMDGRDSRKNSSQGDHGNLSSRAVRRIVPAVRLKSFRDAVRSLFFPSFTQEPCHEMLVLMYREIEQDRNILQKLKRAALMKQIKESMSQAIDPFAAMKSRQERKKKDAVAGPMIEDFVDLKGNNEPVSLQLYKDIPWGLEVHYFPSIYVLPATGDLLRLDAVTIFGLISAAITYVQHLDNWFCFAFLLGSLMSYVVRVASGWRKAATKYREKIANDKVTNVVAQQWAALDSLGTLAVEEAFAQLTAVFLAMNQGNGKSAIDVELAMYKNGSLDATLSSKWEKWLVD 618
            +V++IA+ LA+ KN+Y RISDEVRAL  LP+DYILG+D+S  +IG+TS VQD  +P AP+FHGL+PREVL+I E+F+R   +S ED++ +++ LKN+L+ LR W+SDI +EAKLL    +D         + A++HLLQL RFSI+PSLP ID+PP P+LIPLG+SKE TLD S+II  D+   +++Q+     ++S YPY+F+ATRGVSV R+SGLLLSLK RAIERSYLGWIA PFT+ T+ +RV  ++KS +   K +  R    +   S             S AVRRIVPAVRL+SF DAV SL FPSFTQEPCHE+  LMYRE+E+++N++Q+ KRAAL KQI+ES+SQA+DPF+AMK+ +E++  D      +ED     G  + +SLQL+KDIPWGL  HYFPS+YVLPAT DLLRLDA+T+FGLISA ++YV+H ++WF  AFLLGS++SY++RVASGW +A+T YREKIA +K  N+VAQQWAA+D++ +LA +EAFAQL AV +A + G+G  A D+E  MYKN SLD   S++W++WL D
Sbjct:   76 QVNEIAQRLADVKNKYRRISDEVRALRVLPEDYILGSDMSSFHIGSTSTVQDLCLPKAPSFHGLNPREVLSIVEEFMRREGLSREDQSFVVKDLKNVLVRLRAWISDIADEAKLLCTLPDDSGDTRIASSVRAYIHLLQLARFSILPSLPRIDQPPSPDLIPLGSSKETTLDPSLIIEEDLLLDILRQKGYRFEQDSIYPYIFIATRGVSVRRDSGLLLSLKLRAIERSYLGWIAGPFTIFTRTNRVMKFMKSLVVKGKTEETRECKDEVEKS------------MSPAVRRIVPAVRLRSFTDAVSSLLFPSFTQEPCHELFALMYREVERNKNLVQEKKRAALFKQIRESISQAVDPFSAMKAEREKRNLDRQEILPLEDISSPIGQKKRISLQLFKDIPWGLREHYFPSVYVLPATQDLLRLDALTLFGLISALVSYVRHSESWFSTAFLLGSVVSYIIRVASGWIRASTSYREKIAREKSANLVAQQWAAIDAIASLATDEAFAQLAAVLIAQHCGDGSLAEDLERRMYKNKSLDEESSAQWQQWLSD 615          
BLAST of Gchil7539.t1 vs. uniprot
Match: R7QR24_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR24_CHOCR)

HSP 1 Score: 347 bits (889), Expect = 2.100e-107
Identity = 205/571 (35.90%), Postives = 318/571 (55.69%), Query Frame = 0
Query:   69 VDKIARSLANAKNRYERISDEVRALHELPDDYILGADLSDLYIGATSIVQDFPVPDAPAFHGLSPREVLTIAEDFLRGMEVSNEDRTSLMEGLKNILISLRNWVSDIKEEAKLLVLAQEDMEAENDPIPMT------AFVHLLQLGRFSIMPSLPTIDEPPPPELIPLGTSKEETLDTSIIINHD-VRNIVVKQQCDLRKESFYPYVFVATRGVSVMRNSGLLLSLKFRAIERSYLGWIAVPFTLLTKPSRVFDWVKSWLSDPKKDPKRSINMDGRDSR------------KNSSQGDHG--NLSSRAVRRIVPAVRLKSFRDAVRSLFFPSFTQEPCHEMLVLMYREIEQDRNILQKLKRAALMKQIKESMSQAIDPFAAMKSRQERKKKDAVAGPMIEDFVDLKGNNEPVSLQLYKDIPWGLEVHYFPSIYVLPATGDLLRLDAVTIFGLISAAITYVQHLDNWFCFAFLLGSLMSYVVRVASGWRKAATKYREKIANDKVTNVVAQQWAALDSLGTLAVEEAFAQLTAVFLAMNQGNGKSAIDVELAMYKNGSLDATLSSKWEKWLVD 618
            + ++AR +  A++++   SDE +AL   PD +ILG++ S+L I + S+ QD  VP AP + GL P+ V     ++L    V   D    +E L  IL +LR W   I ++A+ L L   D E  +D    T      A V LLQLG F+++P +  I +PP PE +PLG S ++TLD ++  +   VR  +     ++   S YPY+F+ATRGV+++RNSGLL   K RAIERSY  WI+ PF    KP    + +  W    +   K     DGR+              ++ S  D      +++ VRR+VPA++L    +++  LF P+FTQEP HE+L LMYRE++ D++ +++  R  L +Q+KES+++ I+P    K R   K K          F    G  +PVS+ L++ + WG   H+ PS +VLPAT DLLR+DA+T+ GL+S   TY ++ +  F F  L GSL +Y VRV  GWR + +KY+ +IA+++   +++Q+ +ALDSL  +A EE    + +V+L     N K A +++  ++   +L       W+ WL D
Sbjct:   73 LQRLARKVGEARDKFMEASDEAKALKSSPDGFILGSEFSNLGISSMSLKQDLDVPPAPKYWGLDPQHVFEKVREYLVREGVDESDCDEYIEDLGRILSALRGWTFAISDQARPL-LQLSDHEGNDDVFQTTSSDSVDALVTLLQLGGFAVLPDIIEITDPPCPEALPLGESIKDTLDPTLSQHSPAVRQHIESNGVNIGSSSHYPYLFIATRGVTLVRNSGLLFPQKIRAIERSYFSWISAPFAFFVKPILALNAL-GWNLALRVTQKELDRPDGREDAVRVLSAGPDVVGQSGSPNDSSLERTNTKRVRRVVPALKLDGGWNSLARLFLPTFTQEPAHELLFLMYREVDLDKDSIRREARRKLAQQVKESVAEVINPIPR-KRRTVDKPKCETGEAAFYKFQKPIGRLKPVSINLFRSVQWGTIKHFLPSTFVLPATRDLLRIDALTLLGLVSTIATYARNAETPFVFPLLFGSLATYAVRVIFGWRSSLSKYKGQIASERAKAILSQERSALDSLAVIAAEEQLPDVCSVWLCGVLKNMKEASEIQEDVFGEVTLCRETVQSWKDWLND 640          
BLAST of Gchil7539.t1 vs. uniprot
Match: A0A7S2ZU53_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZU53_9RHOD)

HSP 1 Score: 70.1 bits (170), Expect = 1.670e-9
Identity = 38/111 (34.23%), Postives = 65/111 (58.56%), Query Frame = 0
Query:  451 DLKGNNEPVSLQLYKDIPWGLEVHYFPSIYVLPATGDLLRLDAVTIFGLISAAITYVQHLDNWFCFAFLLGSLMSYVVRVASGWRKAATKYREKIANDKVTNVVAQQWAAL 561
            DL+G  EP+ ++LY D+ +     +FP   V+P+T D+LRLD +TI GLI++  ++   +DN F      G+L+ Y+VRV   +     +Y+E+    ++ ++ AQ  A L
Sbjct:   82 DLEGA-EPLQMKLYDDVAFAAVSAFFPGGIVIPSTFDILRLDLLTITGLIASITSFFTRIDNKFASWVAAGTLLQYLVRVFVNFINITAQYKERRGRQQLDSISAQGNAVL 191          
The following BLAST results are available for this feature:
BLAST of Gchil7539.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J585_9FLOR6.570e-21056.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QR24_CHOCR2.100e-10735.90Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZU53_9RHOD1.670e-934.23Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 69..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 513..532
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 533..624
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 288..487
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 508..512
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 488..507
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 264..287
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..263
IPR022227Protein of unknown function DUF3754PFAMPF12576DUF3754coord: 388..548
e-value: 4.9E-6
score: 26.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1799164..1801038 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7539.t1Gchil7539.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1799164..1801038 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7539.t1 ID=Gchil7539.t1|Name=Gchil7539.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=625bp
MDGFVPYPSFFLSQSKKTESNSPITRRRRHVVLAGHGLKHRRNKSTKHHV
KTEENGETSASSRANRPEVDKIARSLANAKNRYERISDEVRALHELPDDY
ILGADLSDLYIGATSIVQDFPVPDAPAFHGLSPREVLTIAEDFLRGMEVS
NEDRTSLMEGLKNILISLRNWVSDIKEEAKLLVLAQEDMEAENDPIPMTA
FVHLLQLGRFSIMPSLPTIDEPPPPELIPLGTSKEETLDTSIIINHDVRN
IVVKQQCDLRKESFYPYVFVATRGVSVMRNSGLLLSLKFRAIERSYLGWI
AVPFTLLTKPSRVFDWVKSWLSDPKKDPKRSINMDGRDSRKNSSQGDHGN
LSSRAVRRIVPAVRLKSFRDAVRSLFFPSFTQEPCHEMLVLMYREIEQDR
NILQKLKRAALMKQIKESMSQAIDPFAAMKSRQERKKKDAVAGPMIEDFV
DLKGNNEPVSLQLYKDIPWGLEVHYFPSIYVLPATGDLLRLDAVTIFGLI
SAAITYVQHLDNWFCFAFLLGSLMSYVVRVASGWRKAATKYREKIANDKV
TNVVAQQWAALDSLGTLAVEEAFAQLTAVFLAMNQGNGKSAIDVELAMYK
NGSLDATLSSKWEKWLVDKHLHDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022227DUF3754