Gchil7436.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7436.t1
Unique Name	Gchil7436.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	256

Homology

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BLAST of Gchil7436.t1 vs. uniprot
Match: A0A2V3IEI3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEI3_9FLOR)

HSP 1 Score: 143 bits (360), Expect = 9.080e-36
Identity = 91/201 (45.27%), Postives = 125/201 (62.19%), Query Frame = 0

Query:   58 MLEKGGALLGAGVLIMATSGVSFPAAVTCSAIVIATTGVARAKAAVNDNVIHQEARAAFRRSKSVRKLENIVFPRRKASM----GKNIKKYRTFAPEISDPRPTVPAPESSEVELRHAS---GDIGANTEEAMAANIDVEAYSVVHSEPSILSVPVLGTILNTVDDIAFRAERLSDQFSYRLITIIGVKHSSSSWVLLESF 251
            ML+KGGA+LG G+L+MA SG+S P  +T SA+++ T GV +A+AA     I+Q+AR AFR+SKSVRKLE I+ P    +     G+N K  +      +D    V    SS    R        +    E+ +A  +DVEA+SV   EPSILS P+LG +LN  D++AF  E+LSDQ SYRL +I+G +  SSSW+LL+SF
Sbjct:  353 MLQKGGAVLGVGMLMMAISGLSLPTYITVSAVLVTTMGVTQARAAEMKGEIYQKAREAFRQSKSVRKLETIIKPSNTPATQRYTGENKKSLKAA---FTDQFELVSVSMSSAQRTRKREIVPKPVEVEPEDIIA--VDVEAFSVSRPEPSILSAPILGQVLNHTDEVAFAVEKLSDQLSYRLRSILGARQESSSWILLKSF 548

The following BLAST results are available for this feature:

BLAST of Gchil7436.t1 vs. uniprot

BLAST of Gchil7436.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IEI3_9FLOR	9.080e-36	45.27	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..62
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 63..84
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 85..255
None	No IPR available	TMHMM	TMhelix		coord: 62..84

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000007_pilon	contig	tig00000007_pilon:1159660..1160427 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7436.t1	Gchil7436.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000007_pilon 1159660..1160427 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7436.t1 ID=Gchil7436.t1|Name=Gchil7436.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=256bp
MKGIKFQRESSTKQTKFSLSLSPDGPEKTNLDILARKSGAMGKFRRNEMF
DTRKPGRMLEKGGALLGAGVLIMATSGVSFPAAVTCSAIVIATTGVARAK
AAVNDNVIHQEARAAFRRSKSVRKLENIVFPRRKASMGKNIKKYRTFAPE
ISDPRPTVPAPESSEVELRHASGDIGANTEEAMAANIDVEAYSVVHSEPS
ILSVPVLGTILNTVDDIAFRAERLSDQFSYRLITIIGVKHSSSSWVLLES
FRRKS*