Gchil7401.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7401.t1
Unique NameGchil7401.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length324
Homology
BLAST of Gchil7401.t1 vs. uniprot
Match: A0A2V3JBD7_9FLOR (Kinetochore protein mis18 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3JBD7_9FLOR)

HSP 1 Score: 260 bits (664), Expect = 2.890e-81
Identity = 127/247 (51.42%), Postives = 178/247 (72.06%), Query Frame = 0
Query:   24 DMKNIPD---------EHPANFSDIIFQCANCHIVVGDTRSPHVVDLDNNILSLGAASNIKSEDKLHICQNGFATGCTFRRLLCDSCNTPVGRTYTSTTAALDQYRSLYTFDYDSLDTYRLGSGKTPEGETLDNLKTHETKREPDDEEPRVSAEDFIALDTYVTDVGKAVNKQTDAMDQYGKALEEIQKDFKDSDNLVKDIRQSLEYVQNIILVWEERLRNLDSFKEKTNKLLEIPKSCTKRCQTME 261
            D +N PD         E P  F DI+FQC  C++VVGDT+S H+ D+ N ILSL  ASN+K ED++H+CQ+GFA GCTF+R++C +C +P+GR Y ST A+LD YRSL+TF+ +SL TY+LGSGKT EG+ + + ++++   + +  E  V+ EDF+ LD YV ++GKAVN  TDA   YG ALEE++++F+D+++L KDIRQSLEYVQNIILVWEER R+ D+F++ T K +E  +    R Q +E
Sbjct:   51 DAQNEPDSTTHEGMAGEEPDIFDDIVFQCGECNVVVGDTKSRHLTDVKNGILSLKIASNVKVEDRVHVCQSGFAAGCTFKRIMCLNCKSPLGRVYASTVASLDVYRSLFTFNCESLQTYKLGSGKTLEGKCIPDEESNQPAPQNNGSEATVTVEDFVTLDKYVANLGKAVNNLTDAFGHYGGALEEMRREFRDNNDLTKDIRQSLEYVQNIILVWEERFRSFDAFRQNTTKSIEGCQRQNDRVQHLE 297          
BLAST of Gchil7401.t1 vs. uniprot
Match: A0A8B8AQ38_CRAVI (uncharacterized protein LOC111103880 isoform X1 n=3 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8AQ38_CRAVI)

HSP 1 Score: 73.9 bits (180), Expect = 4.010e-11
Identity = 39/124 (31.45%), Postives = 64/124 (51.61%), Query Frame = 0
Query:   29 PDEHPANFSD--IIFQCANCHIVVGDTRSPHVVDLDNNILSLGAASNIKSEDK-LHICQNGFATGCTFRRLLCDSCNTPVGRTYTSTTAALDQYRSLYTFDYDSLDTYRLGSGKTPEGETLDNL 149
            PD    N  +  ++FQCA C++++GD+ +   VD  +  ++L   SN   ED+ + I   GF  G T+ ++ C +C   +GR Y      LD  R +YT   D L +Y++GS      +T  +L
Sbjct:   18 PDSSSFNADEPPLVFQCAQCNVIIGDSTAWACVDDISRTITLKNVSNAVVEDEEMKIANTGFDAGSTYYKMSCATCREDIGRRYKGAVNHLDSARGMYTLFVDKLSSYQIGSYNKDSNDTAASL 141          
BLAST of Gchil7401.t1 vs. uniprot
Match: F2U1H3_SALR5 (Mis18 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U1H3_SALR5)

HSP 1 Score: 70.5 bits (171), Expect = 1.360e-10
Identity = 41/100 (41.00%), Postives = 55/100 (55.00%), Query Frame = 0
Query:   39 IIFQCANCHIVVGDTRSPHVVDLDNNILSL-GAASNIKSEDKLHICQNGFATGCTFRRLLCDSCNTPVGRTYTSTTAALDQYRSLYTFDYDSLDTYRLGS 137
            ++FQCA C  VVGD+ +    D D N ++L GAA  +K   +L     G   G T+    C SC   +GR Y +T   LD  R L TFD D+L +Y+LGS
Sbjct:   53 LVFQCAACRAVVGDSFAWVCSDQDLNTITLTGAAPGVKINGQLETSTQGRDLGSTYVTFQC-SCGAILGRVYQTTARHLDHMRDLMTFDLDALTSYKLGS 151          
BLAST of Gchil7401.t1 vs. uniprot
Match: A0A316Z1B1_9BASI (Mis18 domain-containing protein n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316Z1B1_9BASI)

HSP 1 Score: 71.6 bits (174), Expect = 2.850e-10
Identity = 47/145 (32.41%), Postives = 76/145 (52.41%), Query Frame = 0
Query:    2 HDAAPEASHPSADGNNAISTPEDMKNIPDEHPANFSDIIFQCANCHIVVGDTRSPHVVDLDNNILSLGAASN-IKSEDKLHICQN-GFATGCTFRRLLC-DSCNTPVGRTYTSTTAALDQYRSLYTFDYDSLDTYRLGSGKTPEG 143
            H+A  E    SA     +   ++ + + DE P++ + ++FQC  C  ++GD+ +  V   +  +L L A +  ++++  LH     G   G TF  L C   C+ P+GRTY +T AALD+ RS Y  D  ++  Y+LGS  T  G
Sbjct:  183 HEALLERESESAQAE-VLEHQQEEEALRDEVPSDEALLVFQCVQCGAILGDSLAWVVAQRELALLVLSAVTPAVQADPSLHTSSAPGPDLGSTFSTLACAPPCSAPLGRTYRTTPAALDELRSAYALDIAAVRVYQLGSAMTANG 326          
BLAST of Gchil7401.t1 vs. uniprot
Match: A0A830H7G4_9CHLO (Mis18 domain-containing protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H7G4_9CHLO)

HSP 1 Score: 68.2 bits (165), Expect = 1.110e-9
Identity = 55/201 (27.36%), Postives = 88/201 (43.78%), Query Frame = 0
Query:   39 IIFQCANCHIVVGDTRSPHVVDLDNNILSLGAASNIK-SEDKLHICQNGFATGCTFRRLLCDSCNTPVGRTYTSTTAALDQYRSLYTFDYDSLDTYRLGSGKTPEGETLDNLKTHETKREPDDEEPRVSAEDFIALDTYVTDVGKAVNKQTDAMDQYGKALEEIQKDFKDSDNLVKDIRQSLEYVQNIILVWEERLRNLDS 238
            +++QCANC +V GDT      + +   ++L AASNI   E +      G     T+  + C SC++ VG+ Y +T  +LD  R  ++F +D+L TY LG               H      D+E+      D  A  T              A    G  LE + +  K  +  V ++ +      NI+L++ ERL NL++
Sbjct:   20 LVWQCANCRVVFGDTYGFVCANEELRTITLKAASNIVVDEAEPRTSAEGIDASSTYFAIRCKSCDSMVGKFYRATPRSLDVLRDSFSFSHDALITYTLG---------------HNELTVEDEED---GGGDAAAAGT--------------ANGDGGATLENVVEAIKSVEGQVAELDKQHMKTMNILLLYSERLENLET 188          
BLAST of Gchil7401.t1 vs. uniprot
Match: A0A4D9CX68_9STRA (Mis18 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX68_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.170e-9
Identity = 37/113 (32.74%), Postives = 57/113 (50.44%), Query Frame = 0
Query:   29 PDEHPANFSDI----IFQCANCHIVVGDTRSPHVVDLDNNILSLGAASNIKSEDKLHICQNGFATGCTFRRLLCDSCNTPVGRTYTSTTAALDQYRSLYTFDYDSLDTYRLGS 137
            PD   AN + +    +FQCA C  +VGD+      D D   ++L  A  I         + G   G TF  L C+ C+T +G+ Y +T   LD  R+L+T   D+L+++ LG+
Sbjct:   13 PDASSANDATVTAYVVFQCAECRRIVGDSLGLSSADEDLRHITLRGACGIVRGPCTRTSEEGNDRGSTFHELFCEGCSTLLGKVYLTTPPRLDGARNLFTLSTDALESFELGT 125          
BLAST of Gchil7401.t1 vs. uniprot
Match: UPI0007759FB2 (protein Mis18-alpha n=1 Tax=Protobothrops mucrosquamatus TaxID=103944 RepID=UPI0007759FB2)

HSP 1 Score: 66.6 bits (161), Expect = 1.750e-9
Identity = 34/102 (33.33%), Postives = 51/102 (50.00%), Query Frame = 0
Query:   39 IIFQCANCHIVVGDTRSPHVVDLDNNILSLGAAS-NIKSEDKLHICQNGFATGCTFRRLLCDSCNTPVGRTYTSTTAALDQYRSLYTFDYDSLDTYRLGSGK 139
            ++F CA C+ +VGDT S    D D N + L + + N+  + +  +      TGC    L C  C+  +G  Y  T   LD  R L+    DSL++Y LGS +
Sbjct:   35 MVFLCARCNRIVGDTLSWETNDEDTNCILLNSVTRNVSVDKEQRLSSQAGETGCILETLFCSGCSMNLGNIYRCTPRHLDYKRDLFCLKVDSLESYTLGSSE 136          
BLAST of Gchil7401.t1 vs. uniprot
Match: A0A5D6YEM6_9STRA (Mis18 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEM6_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 5.780e-9
Identity = 51/203 (25.12%), Postives = 91/203 (44.83%), Query Frame = 0
Query:   39 IIFQCANCHIVVGDTRSPHVVDLDNNILSLGAASNIKSEDKLHICQNGFATGCTFRRLLCDSCNTPVGRTYTSTTAALDQYRSLYTFDYDSLDTYRLGSGKTPEGETLDNLKTHETKREPDDEEPRVSAEDFIALDTYVTDVGKAVNKQTDAMDQYGKALEEIQKDFKDSDNLVKDIRQSLEYVQNIILVWEERLRNLDSFKE 241
            ++FQC  C  V GD+ +    + +  +++L A +N+ +  +    ++G   G +F+ LLC  C T +GR+Y +T  ALD  R L++F   ++ +Y+LG                                 +  L   V   G+A  ++T A+       ++      D   L K +R+ +  VQN++LV +ERL  L+   E
Sbjct:  171 VVFQCGTCRSVFGDSYAFVGSNAELLLVTLSAVTNVTTGAEPQTSRDGADAGSSFQELLCAQCQTVLGRSYLTTPLALDALRGLFSFATTAIASYQLG---------------------------------YPQLQAAVAGGGRAATRETRAV-----VTDDAVALAADRRELCK-LREDMTKVQNLLLVVDERLLQLEDAHE 334          
BLAST of Gchil7401.t1 vs. uniprot
Match: UPI000719C120 (protein Mis18-alpha-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719C120)

HSP 1 Score: 64.7 bits (156), Expect = 6.470e-9
Identity = 35/119 (29.41%), Postives = 58/119 (48.74%), Query Frame = 0
Query:   39 IIFQCANCHIVVGDTRSPHVVDLDNNILSLGAAS-NIKSEDKLHICQNGFATGCTFRRLLCDSCNTPVGRTYTSTTAALDQYRSLYTFDYDSLDTYRLGSGKTPEGETLDNLKTHETKR 156
            I+FQCA C++++GD+ S    +   + + L A + N+     +         G T+  L C++C T +GR Y +T   LD+ R L+ F    + +Y LGS +       +NL    T R
Sbjct:   13 IVFQCAKCNVIIGDSTSWAFANKSLSGVVLHATTQNVTETQMVRTSDEDVDFGSTYTLLQCNNCKTTIGRVYKTTPKKLDEVRDLFMFSVPMISSYHLGSFEQKTNTNAENLLDIPTAR 131          
BLAST of Gchil7401.t1 vs. uniprot
Match: A0A0E9NJN7_SAICN (Mis18 domain-containing protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NJN7_SAICN)

HSP 1 Score: 66.2 bits (160), Expect = 1.940e-8
Identity = 32/108 (29.63%), Postives = 56/108 (51.85%), Query Frame = 0
Query:   32 HPANFSDIIFQCANCHIVVGDTRSPHVVDLDNNILSLGAASNIKSEDKLHICQNGFAT--GCTFRRLLCDSCNTPVGRTYTSTTAALDQYRSLYTFDYDSLDTYRLGS 137
            HP   + +IFQCA+C  ++GD+ +     +D N  +L +A NI   + + +  +  +   GCT+  L C  C   +G+ Y +T   LD+ R +YT    +   Y +G+
Sbjct:  150 HPPT-APVIFQCASCRTIIGDSYAHITSHIDLNTFTLSSAPNITIREPILLSTDDESADKGCTYSELACAGCEATLGKMYRTTLRTLDEIRDMYTISLPAATLYEVGT 256          
The following BLAST results are available for this feature:
BLAST of Gchil7401.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2V3JBD7_9FLOR2.890e-8151.42Kinetochore protein mis18 n=1 Tax=Gracilariopsis c... [more]
A0A8B8AQ38_CRAVI4.010e-1131.45uncharacterized protein LOC111103880 isoform X1 n=... [more]
F2U1H3_SALR51.360e-1041.00Mis18 domain-containing protein n=1 Tax=Salpingoec... [more]
A0A316Z1B1_9BASI2.850e-1032.41Mis18 domain-containing protein n=1 Tax=Tilletiops... [more]
A0A830H7G4_9CHLO1.110e-927.36Mis18 domain-containing protein n=2 Tax=Pycnococcu... [more]
A0A4D9CX68_9STRA1.170e-932.74Mis18 domain-containing protein n=2 Tax=Monodopsid... [more]
UPI0007759FB21.750e-933.33protein Mis18-alpha n=1 Tax=Protobothrops mucrosqu... [more]
A0A5D6YEM6_9STRA5.780e-925.12Mis18 domain-containing protein n=1 Tax=Pythium br... [more]
UPI000719C1206.470e-929.41protein Mis18-alpha-like n=1 Tax=Priapulus caudatu... [more]
A0A0E9NJN7_SAICN1.940e-829.63Mis18 domain-containing protein n=2 Tax=Saitoella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 274..294
NoneNo IPR availableCOILSCoilCoilcoord: 184..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..163
NoneNo IPR availablePANTHERPTHR16431NEUROGENIC PROTEIN MASTERMINDcoord: 24..223
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 180..298
IPR004910Yippee/Mis18/CereblonPFAMPF03226Yippee-Mis18coord: 40..140
e-value: 1.1E-16
score: 60.9
IPR034752Mis18 domainPROSITEPS51793MIS18coord: 38..135
score: 32.381931

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:943900..944936 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7401.t1Gchil7401.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 943900..944936 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7401.t1 ID=Gchil7401.t1|Name=Gchil7401.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=324bp
MHDAAPEASHPSADGNNAISTPEDMKNIPDEHPANFSDIIFQCANCHIVV
GDTRSPHVVDLDNNILSLGAASNIKSEDKLHICQNGFATGCTFRRLLCDS
CNTPVGRTYTSTTAALDQYRSLYTFDYDSLDTYRLGSGKTPEGETLDNLK
THETKREPDDEEPRVSAEDFIALDTYVTDVGKAVNKQTDAMDQYGKALEE
IQKDFKDSDNLVKDIRQSLEYVQNIILVWEERLRNLDSFKEKTNKLLEIP
KSCTKRCQTMELEFTNLGPKLDRLKDTLTRLDHMEREITDLSAKVDGLAG
TGTRFNDIKAVWTPALGEVFTES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004910Yippee/Mis18/Cereblon
IPR034752Mis18