Gchil7393.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7393.t1
Unique NameGchil7393.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length310
Homology
BLAST of Gchil7393.t1 vs. uniprot
Match: A0A2V3J5W2_9FLOR (rRNA-processing protein FCF1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W2_9FLOR)

HSP 1 Score: 101 bits (251), Expect = 2.060e-20
Identity = 56/102 (54.90%), Postives = 74/102 (72.55%), Query Frame = 0
Query:    2 DTKIMVAVADVELLTQLRHIPGVPLISILNSTKLVLKPPTKATLDFVRENEKAKTQTISDRDKSLLEQIKAMERATRPERKTIKKKRRAKGPNPLSVKKSNK 103
            D K+ VA A+  +L Q+  IPG+PLISI+N TKL L+PP KATLD +   EK+KT  ISD DK+LL ++   E+A++P R   ++ R+AKGPNPLSVKKS K
Sbjct:  114 DPKVFVAAANRAILKQIASIPGIPLISIMNQTKLALRPPNKATLDHILLAEKSKTMAISDADKALLARVTEAEKASKPIRTIARRHRKAKGPNPLSVKKSRK 215          
BLAST of Gchil7393.t1 vs. uniprot
Match: R7QS07_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS07_CHOCR)

HSP 1 Score: 73.9 bits (180), Expect = 4.710e-11
Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 0
Query:    1 MDTKIMVAVADVELLTQLRHIPGVPLISILNSTKLVLKPPTKATLDFVRENEKAKTQTISDRDKSLLEQIKAMERATRPERKTIKKKRRAKGPNPLSVKKSNK 103
            ++ K+  A  D ELL ++   PG+P I+I+N TKL L+ P++ATL  V++ E AKT  +   DK+ L++ +    +        KK++RAKGPNPLS+KK+ K
Sbjct:  113 LEKKLFCATNDTELLAKISRTPGIPTITIVNETKLALRSPSRATLYHVQKQENAKTSCLGTSDKAFLKKFETETASKDHAPNPAKKRKRAKGPNPLSMKKAKK 215          
BLAST of Gchil7393.t1 vs. uniprot
Match: G4YZS4_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZS4_PHYSP)

HSP 1 Score: 67.0 bits (162), Expect = 2.310e-9
Identity = 47/102 (46.08%), Postives = 62/102 (60.78%), Query Frame = 0
Query:    2 DTKIMVAVADVELLTQLRHIPGVPLISILNSTKLVLKPPTKATLDFVRENEKAKTQTISDRDKSLLEQIKAMERATRPERKTIKKKRRAKGPNPLSVKKSNK 103
            D K +V   +VEL   LR +PGVPLI  LN + LV +  ++ATL  VR++EKA    +   +K  LEQ++  E     E K    K+RAKGPNPLS+KKS K
Sbjct:  121 DRKFVVCTQEVELRKALRLVPGVPLIY-LNRSVLVFEDISRATLAIVRQDEKANMAKLDVNEKRKLEQMQGGEEGEDHEEKQRLTKKRAKGPNPLSMKKSTK 221          
BLAST of Gchil7393.t1 vs. uniprot
Match: A0A485KPH4_9STRA (Aste57867_10061 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPH4_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.910e-8
Identity = 48/107 (44.86%), Postives = 64/107 (59.81%), Query Frame = 0
Query:    2 DTKIMVAVADVELLTQLRHIPGVPLISILNSTKLVLKPPTKATLDFVRENEKAKTQTISDRDKSLLEQIKAMERATRPERKTIKKKRRAKGPNPLSVKKSNKESKKR 108
            D K +VA  + EL  QLR +PGVPLI  LN + LV +  ++ATL   R+++  K   ++D +K  L+ I      T+PE+K    KR AKGPNPLSVKK  K  K R
Sbjct:  113 DKKYIVATQETELRAQLRRVPGVPLIY-LNRSVLVFEDMSEATLKISRKDDLVKMAKLNDHEKRKLDSITDRVVETQPEKKARLVKR-AKGPNPLSVKKGAKPKKVR 217          
BLAST of Gchil7393.t1 vs. uniprot
Match: A0A024T8F2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T8F2_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 3.590e-8
Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 0
Query:    2 DTKIMVAVADVELLTQLRHIPGVPLISILNSTKLVLKPPTKATLDFVRENEKAKTQTISDRDKSLLEQIKAMERATRPERKTIKKKRRAKGPNPLSVKKSNKESKKR 108
            D K +VA  + EL +QLR +PGVPLI  LN + LV +  ++ATL   R+++ AK   ++  +K  LE + +      PE+K+   KR AKGPNPLSVKK+ K  K R
Sbjct:  115 DRKFIVATQETELRSQLRRVPGVPLIY-LNRSVLVFEDMSEATLRISRKDDHAKAAKLNAGEKRKLEAVASSTVREAPEKKSRLVKR-AKGPNPLSVKKATKPKKVR 219          
BLAST of Gchil7393.t1 vs. uniprot
Match: A0A6A3LC83_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LC83_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 4.880e-8
Identity = 46/99 (46.46%), Postives = 59/99 (59.60%), Query Frame = 0
Query:    2 DTKIMVAVADVELLTQLRHIPGVPLISILNSTKLVLKPPTKATLDFVRENEKAKTQTISDRDKSLLEQIKAMERATRPERKTIKKKRRAKGPNPLSVKK 100
            D K +V   +VEL   LR +PGVPLI  LN + LV +  ++ATL  VR+ EKA    +   +K  LEQ++  E     E K    K+RAKGPNPLSVKK
Sbjct:  118 DRKFVVCTQEVELRKALRLVPGVPLIY-LNRSVLVFEEISRATLAIVRQEEKANMAKLDVNEKRKLEQMQEGEDGQDHEDKQRLAKKRAKGPNPLSVKK 215          
BLAST of Gchil7393.t1 vs. uniprot
Match: K3WYS6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYS6_GLOUD)

HSP 1 Score: 63.2 bits (152), Expect = 5.130e-8
Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = 0
Query:    2 DTKIMVAVADVELLTQLRHIPGVPLISILNSTKLVLKPPTKATLDFVRENEKAKTQTISDRDKSLLEQIKAMERATRPERKTIKKKRRAKGPNPLSVKKSNK 103
            D K +VA  +VEL   LR +PGVPL+  LN + LV +  ++ATL  VR+ EKAK   + + +K  L+ +   +     E++ + KK  AKGPNPLS+KK  K
Sbjct:  122 DRKFIVATQEVELRKVLREVPGVPLVY-LNRSVLVFEDISRATLAIVRQEEKAKLAKLDENEKRKLDHVTEGDGNNEEEKRRLTKK--AKGPNPLSMKKPTK 220          
BLAST of Gchil7393.t1 vs. uniprot
Match: W4H7D3_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H7D3_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 6.800e-8
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 0
Query:    2 DTKIMVAVADVELLTQLRHIPGVPLISILNSTKLVLKPPTKATLDFVRENEKAKTQTISDRDKSLLEQIKAMERATRPERKTIKKKRRAKGPNPLSVKKSNKESKKR 108
            D K +VA  + EL  +LR +PGVPLI  LN + LV +  ++ATL   R+++ AK   ++D +K  LE + +      PE+K    KR AKGPNPLS+KK+ K  K R
Sbjct:  117 DKKFIVATQETELRGRLRRVPGVPLIY-LNRSVLVFEDMSEATLRISRKDDHAKETKLNDSEKRKLEAVASSAPKEAPEKKARLVKR-AKGPNPLSMKKATKPKKVR 221          
BLAST of Gchil7393.t1 vs. uniprot
Match: A0A662WH09_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WH09_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 3.620e-7
Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = 0
Query:    2 DTKIMVAVADVELLTQLRHIPGVPLISILNSTKLVLKPPTKATLDFVRENEKAKTQTISDRDKSLLEQIK--AMERATRPERKTIKKKRRAKGPNPLSVKKSNK 103
            + K +V   +VEL   LR +PGVPLI  LN + LV +  ++ATL  VR+ EKA    +   +K  LEQ++    +  T  E++    K+RAKGPNPLS+KKS+K
Sbjct:  163 ERKFVVCTQEVELRKALRSVPGVPLIY-LNRSVLVFEDISRATLAIVRQEEKANMSKLDVNEKRKLEQMEEGGHDGETYAEQQQRLTKKRAKGPNPLSMKKSSK 265          
BLAST of Gchil7393.t1 vs. uniprot
Match: A0A225W858_9STRA (rRNA-processing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W858_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 4.220e-7
Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 0
Query:    2 DTKIMVAVADVELLTQLRHIPGVPLISILNSTKLVLKPPTKATLDFVRENEKAKTQTISDRDKSLLEQIKAM--ERATRPERKTIKKKRRAKGPNPLSVKKSNK 103
            D K +V   +VEL   LR +PGVPL+  LN + LV +  ++ATL  VR+ EKA    +   +K  L+Q++    ++   P+++ + KKR AKGPNPLS+KKS K
Sbjct:  118 DGKFVVCTQEVELRKALRQVPGVPLLY-LNRSVLVFEEISRATLAIVRQEEKANMAKLDVNEKRKLDQMQEDNDDQTHEPQQQRLTKKR-AKGPNPLSMKKSTK 219          
The following BLAST results are available for this feature:
BLAST of Gchil7393.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A2V3J5W2_9FLOR2.060e-2054.90rRNA-processing protein FCF1-like n=1 Tax=Gracilar... [more]
R7QS07_CHOCR4.710e-1140.78Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
G4YZS4_PHYSP2.310e-946.08Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A485KPH4_9STRA1.910e-844.86Aste57867_10061 protein n=1 Tax=Aphanomyces stella... [more]
A0A024T8F2_9STRA3.590e-843.93Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A6A3LC83_9STRA4.880e-846.46Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
K3WYS6_GLOUD5.130e-842.16Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
W4H7D3_9STRA6.800e-842.99Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
A0A662WH09_9STRA3.620e-743.27Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A225W858_9STRA4.220e-742.31rRNA-processing protein n=1 Tax=Phytophthora megak... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 292..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..144
NoneNo IPR availablePANTHERPTHR12416:SF3RRNA-PROCESSING PROTEIN UTP23 HOMOLOGcoord: 4..178
NoneNo IPR availablePANTHERPTHR12416UNCHARACTERIZEDcoord: 4..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:842564..843493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7393.t1Gchil7393.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 842564..843493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7393.t1 ID=Gchil7393.t1|Name=Gchil7393.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=310bp
MDTKIMVAVADVELLTQLRHIPGVPLISILNSTKLVLKPPTKATLDFVRE
NEKAKTQTISDRDKSLLEQIKAMERATRPERKTIKKKRRAKGPNPLSVKK
SNKESKKRTDNPTPNEGHDSGGEKQSLNPSLSLAMTNSSDSVDGAKHGSE
AVAMPTSGKRKRGRRRSASYQNNSQKEADSSPPLKESREPMPTSIDGQIT
STIEGSHVQNGCTPMTTTRPAVLEISAIKSTEQEPQSKENFRDSVEGDES
VFTKSAKQNQTVNGCHIDDDGSQSNTSIPKIQVGAADKAQPPKRKKQRKN
RRRRPSKNQ*
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