Gchil7392.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7392.t1
Unique NameGchil7392.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length141
Homology
BLAST of Gchil7392.t1 vs. uniprot
Match: A0A2V3J5X7_9FLOR (Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5X7_9FLOR)

HSP 1 Score: 157 bits (396), Expect = 3.190e-47
Identity = 75/105 (71.43%), Postives = 90/105 (85.71%), Query Frame = 0
Query:   36 VPVRNCSDISKAEVENIAKLAQLRFSDDELLKVVPEIKKIIDFFDIIRETDVEGVEPMTSAQNLQNVMREDVPHRFSNVDGMLAEAPCLEKDFIRVPKLSSNPSD 140
            +PVR CS+ISK EV+NIAKLAQLR S++E+ KVVPEIKKII+FFD   E DVEG+EPMTSAQ++ NVMRED P RF NVDGM+ E PC E+++IRVPKLSSNP+D
Sbjct:    1 MPVRCCSEISKQEVQNIAKLAQLRLSEEEVNKVVPEIKKIINFFDTFSEVDVEGIEPMTSAQDVHNVMREDEPSRFHNVDGMMQEVPCSEREYIRVPKLSSNPTD 105          
BLAST of Gchil7392.t1 vs. uniprot
Match: R7QQW7_CHOCR (Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQW7_CHOCR)

HSP 1 Score: 114 bits (286), Expect = 2.120e-29
Identity = 56/119 (47.06%), Postives = 78/119 (65.55%), Query Frame = 0
Query:   22 KTLQSARRGPRSRVVPVRNCSDISKAEVENIAKLAQLRFSDDELLKVVPEIKKIIDFFDIIRETDVEGVEPMTSAQNLQNVMREDVPHRFSNVDGMLAEAPCLEKDFIRVPKLSSNPSD 140
            K+     R  R+    +  C++ +  EV+ IA+LAQL  S+DE+  + PE++K+I FF+ I E DVEG EPM S  +  NV+R+DVP  FSNVD ++ E P  EK+FIRVPK+SS  SD
Sbjct:   77 KSRSPTHRIYRNSASSIEACAEATPEEVKRIARLAQLNLSEDEITTMTPELQKVIGFFNSINEIDVEGFEPMASPSDANNVLRDDVPVMFSNVDAIMDEVPVAEKEFIRVPKISSESSD 195          
BLAST of Gchil7392.t1 vs. uniprot
Match: A0A7S2ZNI6_9RHOD (Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZNI6_9RHOD)

HSP 1 Score: 93.6 bits (231), Expect = 6.810e-22
Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = 0
Query:   26 SARRGPRSRVVPVRNCS---DISKAEVENIAKLAQLRFSDDELLKVVPEIKKIIDFFDIIRETDVEGVEPMTSAQNLQNVMREDVPHRFSNVDGMLAEAPCLEKDFIRVPKL 134
            SA RG   R   VR CS   +I++  VE  AKLA L+ S++E+ ++ PE++KII F + I   DV GVEP    ++L NV+RED P  F   D ML EAP LE DFIRVPK+
Sbjct:   14 SAWRGASRR--SVRCCSAKVEITRELVEKTAKLASLQLSNEEVDRITPELQKIIGFVEQINAVDVSGVEPTLRVEDLWNVLREDKPTIFPAQDEMLEEAPLLESDFIRVPKI 123          
BLAST of Gchil7392.t1 vs. uniprot
Match: A0A6T6MT11_9RHOD (Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6MT11_9RHOD)

HSP 1 Score: 89.7 bits (221), Expect = 2.190e-20
Identity = 51/112 (45.54%), Postives = 70/112 (62.50%), Query Frame = 0
Query:   26 SARRGPRSRVVPVRNCS---DISKAEVENIAKLAQLRFSDDELLKVVPEIKKIIDFFDIIRETDVEGVEPMTSAQNLQNVMREDVPHRFSNVDGMLAEAPCLEKDFIRVPKL 134
            +A RG   R   VR CS   +I++  VE  AKLA L+ SD+E+ ++ PE++ I+ F + I   DV GVEP    ++L NV+RED P  F   D ML EAP LE D++RVPK+
Sbjct:   14 TAWRGASRR--SVRCCSARVEITRDVVEKTAKLASLQLSDEEVGRITPELQNIVGFVEQINAVDVSGVEPTLRVEDLWNVLREDQPAIFPAQDEMLEEAPQLESDYVRVPKI 123          
BLAST of Gchil7392.t1 vs. uniprot
Match: A0A0R1WEQ2_9LACO (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=2 Tax=Paucilactobacillus TaxID=2767890 RepID=A0A0R1WEQ2_9LACO)

HSP 1 Score: 84.0 bits (206), Expect = 2.040e-18
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 0
Query:   42 SDISKAEVENIAKLAQLRFSDDELLKVVPEIKKIIDFFDIIRETDVEGVEPMTSAQNLQNVMREDVPHRFSNVDGMLAEAPCLEKDFIRVPKLSSNPSD 140
            S I + +V+++A LA+L FSDD+L K  P+++ IID F+ I + D  GVEPMTSA +  N MRED        D +L  AP  E  FI+VP +     D
Sbjct:    3 SHIDEQQVKHVASLAKLEFSDDQLSKFTPQLESIIDMFETIDKVDTTGVEPMTSASDQVNAMREDKAVNSHQRDELLKNAPDTEDGFIKVPAIIDESGD 101          
BLAST of Gchil7392.t1 vs. uniprot
Match: A0A0R1RNW3_9LACO (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=2 Tax=Paucilactobacillus TaxID=2767890 RepID=A0A0R1RNW3_9LACO)

HSP 1 Score: 81.6 bits (200), Expect = 1.630e-17
Identity = 39/99 (39.39%), Postives = 62/99 (62.63%), Query Frame = 0
Query:   42 SDISKAEVENIAKLAQLRFSDDELLKVVPEIKKIIDFFDIIRETDVEGVEPMTSAQNLQNVMREDVPHRFSNVDGMLAEAPCLEKDFIRVPKLSSNPSD 140
            S I + +V+++A LA+L+F+D EL +  P+++ IID F+ + + D  GV+PMTSA +  NVMREDV    +  + +L  AP  E  +I+VP +     D
Sbjct:    3 SQIDEQQVQHVASLAKLKFTDAELSEFTPQLESIIDLFETLEKVDTTGVKPMTSATDQVNVMREDVAVNSNQREALLKNAPEAENGYIKVPAIIDESGD 101          
BLAST of Gchil7392.t1 vs. uniprot
Match: C2EVE0_9LACO (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=5 Tax=Lactobacillaceae TaxID=33958 RepID=C2EVE0_9LACO)

HSP 1 Score: 81.3 bits (199), Expect = 2.440e-17
Identity = 42/101 (41.58%), Postives = 62/101 (61.39%), Query Frame = 0
Query:   42 SDISKAEVENIAKLAQLRFSDDELLKVVPEIKKIIDFFDIIRETDVEGVEPMTSAQNLQNVMREDVPHRFSN--VDGMLAEAPCLEKDFIRVPKLSSNPSD 140
            S I++ +VE++A+LA+L F D+EL K   ++  IID F+ +   D EGVEPMTSA + +NVMRED   + S    D +L  AP  +  +I+VP +     D
Sbjct:    3 SKITEQQVEHVAELAKLEFKDEELTKFTTQLGSIIDMFEDLTNVDTEGVEPMTSASDRENVMREDKAVKSSKEETDALLNNAPDTDDGYIKVPAIIDESED 103          
BLAST of Gchil7392.t1 vs. uniprot
Match: A0A0R1P788_9LACO (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=2 Tax=Lactobacillaceae TaxID=33958 RepID=A0A0R1P788_9LACO)

HSP 1 Score: 75.1 bits (183), Expect = 6.220e-15
Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 0
Query:   42 SDISKAEVENIAKLAQLRFSDDELLKVVPEIKKIIDFFDIIRETDVEGVEPMTSAQNLQNVMREDVPHRFSN--VDGMLAEAPCLEKDFIRVPKLSSNPSD 140
            S I++ +V+++A+LA+L F +DEL K   ++  IID F+ + + D + VEPMTSA +  NVMRED   + S    D +L  AP  +  +IRVP +     D
Sbjct:    3 SKITEQQVKHVAELAKLEFPEDELGKFTTQLGNIIDMFEDLTQVDTDNVEPMTSATDRVNVMREDKAVKSSKEETDALLKNAPDTDDGYIRVPAIIDESED 103          
BLAST of Gchil7392.t1 vs. uniprot
Match: A0A2J6NN15_9LACO (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Limosilactobacillus pontis TaxID=35787 RepID=A0A2J6NN15_9LACO)

HSP 1 Score: 74.7 bits (182), Expect = 8.790e-15
Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = 0
Query:   42 SDISKAEVENIAKLAQLRFSDDELLKVVPEIKKIIDFFDIIRETDVEGVEPMTSAQNLQNVMREDVPHRFSNVD--GMLAEAPCLEKDFIRVPKLSSNPSD 140
            S I++ +VE++A+LA+L F  DEL K   ++  IID F+ +   D +GVEPMTSA +  NVMRED   R S  +   +L  AP  +  +IRVP + +   D
Sbjct:    3 SKITEQQVEHVAELAKLEFPKDELGKFTTQLGSIIDMFEDLAAVDTDGVEPMTSATDRINVMREDKAVRSSKEEREAILKNAPDTDGGYIRVPAIINESED 103          
BLAST of Gchil7392.t1 vs. uniprot
Match: UPI001C3A1877 (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC n=1 Tax=Candidatus Limosilactobacillus intestinipullorum TaxID=2838650 RepID=UPI001C3A1877)

HSP 1 Score: 74.3 bits (181), Expect = 1.240e-14
Identity = 43/101 (42.57%), Postives = 59/101 (58.42%), Query Frame = 0
Query:   42 SDISKAEVENIAKLAQLRFSDDELLKVVPEIKKIIDFFDIIRETDVEGVEPMTSAQNLQNVMRED--VPHRFSNVDGMLAEAPCLEKDFIRVPKLSSNPSD 140
            S I+K +V ++A+LA+L FS DEL +   ++  IID F+ + E   EGVEPMTSA +  N MRED  V      VD +L  AP  +  +IRVP +     D
Sbjct:    3 SKITKQQVAHVAELAKLEFSKDELGEFTTQLGSIIDMFEDLTEEHTEGVEPMTSATDRVNAMREDKAVKAPKEEVDALLKNAPDEDGGYIRVPVIIDESED 103          
The following BLAST results are available for this feature:
BLAST of Gchil7392.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5X7_9FLOR3.190e-4771.43Glutamyl-tRNA(Gln) amidotransferase subunit C, mit... [more]
R7QQW7_CHOCR2.120e-2947.06Glutamyl-tRNA(Gln) amidotransferase subunit C, mit... [more]
A0A7S2ZNI6_9RHOD6.810e-2249.11Glutamyl-tRNA(Gln) amidotransferase subunit C, mit... [more]
A0A6T6MT11_9RHOD2.190e-2045.54Glutamyl-tRNA(Gln) amidotransferase subunit C, mit... [more]
A0A0R1WEQ2_9LACO2.040e-1843.43Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A0R1RNW3_9LACO1.630e-1739.39Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
C2EVE0_9LACO2.440e-1741.58Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A0R1P788_9LACO6.220e-1539.60Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A2J6NN15_9LACO8.790e-1541.58Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
UPI001C3A18771.240e-1442.57Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003837Glu-tRNAGln amidotransferase C subunitTIGRFAMTIGR00135TIGR00135coord: 44..134
e-value: 7.7E-22
score: 75.4
IPR003837Glu-tRNAGln amidotransferase C subunitPFAMPF02686Glu-tRNAGlncoord: 60..131
e-value: 4.0E-13
score: 49.5
IPR003837Glu-tRNAGln amidotransferase C subunitPANTHERPTHR15004UNCHARACTERIZEDcoord: 16..133
IPR003837Glu-tRNAGln amidotransferase C subunitHAMAPMF_00122GatCcoord: 43..136
score: 18.483496
NoneNo IPR availableGENE3D1.10.20.60coord: 42..86
e-value: 2.5E-10
score: 42.1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..140
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
IPR036113Glu-tRNAGln amidotransferase superfamily, subunit CSUPERFAMILY141000Glu-tRNAGln amidotransferase C subunitcoord: 44..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:841371..841857 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7392.t1Gchil7392.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 841371..841857 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7392.t1 ID=Gchil7392.t1|Name=Gchil7392.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=141bp
MKTDGSAFISSFVSWSRAVPSKTLQSARRGPRSRVVPVRNCSDISKAEVE
NIAKLAQLRFSDDELLKVVPEIKKIIDFFDIIRETDVEGVEPMTSAQNLQ
NVMREDVPHRFSNVDGMLAEAPCLEKDFIRVPKLSSNPSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003837Asp/Glu-ADT_csu
IPR036113Asp/Glu-ADT_sf_sub_c