Gchil7354.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7354.t1
Unique NameGchil7354.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length281
Homology
BLAST of Gchil7354.t1 vs. uniprot
Match: A0A2V3JAU7_9FLOR (Nuclear speckle splicing regulatory protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3JAU7_9FLOR)

HSP 1 Score: 182 bits (463), Expect = 6.800e-53
Identity = 131/293 (44.71%), Postives = 179/293 (61.09%), Query Frame = 0
Query:    1 MFDKLSCSSXXXXXXXXKKSKTPFNAVKEAASIISRRRKLPTNPDLQQQIEHIFSQPVQRNEARNEPRKSRYVAKLVQNAKRRKEEAQLVLERRMIREREKEQHLFGHTERFVTPAYKKRLEDNERLASVESHEQSEQPSAHNVSQFYTALLHNKTINANETDSERSQPTAHIEPATNKAAQEKLASRTTSQHSHSPSTAIKQ--PAGDDR-----RATTKDSKSVIPGAIATHQTPSPQPRTQQKPS------QKRLPNKKRGVRRNTPQSIEAYRQRYFARRAKRLAEKKS 280
            MFD  S SS        + +K PFNAVKEAA+  ++RRKLP NPDL+++IEHIFSQPV + +     RKSRY+ KLV++A+RRK EAQ V+E+R+++ERE+E  LF   ERFVTPAYK++LE+NERL  VE  E+ EQPS  NVS+FY  LL +  + + + D+  ++      P  N+   E  A    +Q    P    KQ  P   +      +  +K ++  I   I  H+   P   +  + S      + R+P KKRG+RRNTP+SI AYRQRYF RRAKRLA +K+
Sbjct:    1 MFDSDSSSSSST-----ENAKKPFNAVKEAANA-TQRRKLPVNPDLEKEIEHIFSQPVAKRDTTKRERKSRYIGKLVESAERRKAEAQRVIEQRIVKEREREDALFQGKERFVTPAYKRKLEENERLRQVEIQEEEEQPSGRNVSEFYHKLLQSSVLKSKDDDTGDNKGI----PKDNEQTAEGTADEQDAQGPSGPILEYKQAQPTSTEEPYRLNKQHSKHNRGQINQEI-NHKGDEPPSTSGNRSSYTDMLTKPRIP-KKRGLRRNTPESIAAYRQRYFERRAKRLASEKT 281          
BLAST of Gchil7354.t1 vs. uniprot
Match: A0A059LN60_9CHLO (DUF2040 domain-containing protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LN60_9CHLO)

HSP 1 Score: 70.1 bits (170), Expect = 3.730e-10
Identity = 71/234 (30.34%), Postives = 114/234 (48.72%), Query Frame = 0
Query:   70 SRYVAKLVQNAKRRKEEAQLVLERRMIREREKEQHLFGHTERFVTPAYKKRLEDNERLASVESHEQSEQPS-----AHNVSQFYTALLHNKTINANETDSERSQPTAHIEPATNKAAQEKLASRTTSQH----SHSPSTA--IKQPAGDDRR-ATTKDSKSVIPGAIA-------THQTPSPQPRTQQKPSQKRL------PNKKRGVRRNTPQSIEAYRQRYFARRAKRLAEK 278
            SRYVA L++ A  RK E   + ER+M+RER+ E++++G +ERFVT AYKK+LE++    + +  +Q E+ +       ++  FY      + I+ NE    RS+ TA  +P   K A        +S H    S  PST+   + P+  +++ A ++D K               + Q    QP   +   Q+        P +  G RRNT  ++ A R RY AR+  +LA +
Sbjct:  105 SRYVASLLERADERKREQDFLKERQMLRERDAEEYVYGTSERFVTAAYKKKLEEDRVYEAAQKEKQREEEANAVEKKGHMHDFY------RNIHRNEALGGRSESTARADPNKRKEASRFGEGTQSSSHKVQDSKPPSTSPRARSPSRQEQQDACSRDKKRXXXXXXXXXXXXXXSEQLERAQPDKGESDDQQNFAAAGPAPEQASGARRNTEDAVAAARARYMARKKAKLARR 332          
BLAST of Gchil7354.t1 vs. uniprot
Match: A0A7S0SXB7_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SXB7_9CHLO)

HSP 1 Score: 65.9 bits (159), Expect = 1.030e-8
Identity = 55/177 (31.07%), Postives = 90/177 (50.85%), Query Frame = 0
Query:   62 EARNEPRKSRYVAKLVQNAKRRKEEAQLVLERRMIREREKEQHLFGHTERFVTPAYKKRLEDNERLASVESHEQSEQPS-------AHNVSQFYTALLHNKTINANE---TDSERSQPTAHIEPATNKAAQEKLASRTTSQHSHSPSTAIKQPAGDD---RRATTKDSKSVIPGAIA 225
            +A    RKSRY+  L+   K R+ E  ++ ERR+++EREKE HLFG  ++FVT AY+ +L+++ +    E+ +++ + +          +S FY  L++       E   T  ER  P    EP+T  A +     RTT Q +   +  +K+ A D+   RR   +D K+   G  A
Sbjct:   63 DAERTERKSRYITTLMAKQKEREREEDIIYERRLLKEREKEDHLFGDKDKFVTAAYRAKLQEDAKWIKEEALQEAREANDDVTKKGGDFMSGFYHNLMNRNAAMGAEAVGTQGERKAP----EPSTTAADR----GRTTGQQTDVAADQVKEQAEDEGRKRRMAVEDEKTKAAGRAA 231          
BLAST of Gchil7354.t1 vs. uniprot
Match: UPI001E1D4010 (nuclear speckle splicing regulatory protein 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4010)

HSP 1 Score: 64.7 bits (156), Expect = 1.240e-8
Identity = 71/208 (34.13%), Postives = 104/208 (50.00%), Query Frame = 0
Query:   68 RKSRYVAKLVQNAKRRKEEAQLVLERRMIREREKEQHLFGHTERFVTPAYKKRLEDNERLASVESHEQSEQPSAHNVSQFYTALLHNKTINANETDSERSQPTAHIEPATNKAAQEKLASRTTSQHSHSPSTAIKQPAGDDR-RATTKDSKSVIPGAIATHQTPSPQPRTQQKPSQKRLPNKKRGVRRNTPQSIEAYRQRYFARRAKR 274
            RKSRY+ KLV+ A  RK+ A+  L+R++ +EREKE +LF   ERFVT AYK RL D E+  S E    +   ++   S+F+  +L N     +++ +  ++P              +   RT   +   PS  +  PA   R +    D +S I   I+               ++   P   RG+RRN  +SIEAYRQRY+ARR KR
Sbjct:   46 RKSRYIDKLVRQAAVRKDAAEAALDRKLAKEREKEDNLFPDKERFVTSAYKARLADREKAQSDEIRAPTR--ASPMPSEFFGKMLLNAQKGRHQSIASDNRPELS-----------RKRQRTLLDY---PS-PVDVPAQVQRIQDGGLDCRSEIVEEISNDMR-----------TKDISPPLVRGLRRNDEESIEAYRQRYYARRDKR 225          
BLAST of Gchil7354.t1 vs. uniprot
Match: A0A2U1KW53_ARTAN (Cytochrome P450, conserved site-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1KW53_ARTAN)

HSP 1 Score: 64.7 bits (156), Expect = 2.140e-8
Identity = 56/211 (26.54%), Postives = 103/211 (48.82%), Query Frame = 0
Query:   68 RKSRYVAKLVQNAKRRKEEAQLVLERRMIREREKEQHLFGHTERFVTPAYKKRLEDN------ERLASVESHEQSEQPSAHNVSQFYTALLHNKTINANETDSERSQPTAHIEPATNKAAQEKLASRTTSQHSHSPSTAIKQPAGDDRRATTKDSKSVIPGAI-ATHQTPSPQPRTQQKPSQKRLPNKKRGVRRNTPQSIEAYRQRYFARR 271
            RK RY+  L++  K R+ E +++ ER++ +ER KE HLFG  E+FVT AYK++L +       ERL  +    +       ++S+FY +L  N    A   D   ++P+ H E + N+ ++E   S+  S  +   +      A  +R    +   + +P     ++ +P  + +T+   +Q    + KR        ++ A ++RY AR+
Sbjct:   92 RKPRYIQALIEKTKVREREHEIIYERKLAKERSKEDHLFGDKEKFVTGAYKRKLAEQAKWLEEERLRQLREEREDITKKGGDMSEFYYSLSKNVAFGA--PDRVSTKPSKHKEESENQKSEESQLSKVVSPRAREENHGETSAASKERSEIVEAKPAPVPHKQEVSNGSPKQESKTESVTAQPTTDHHKRNQ-----DAVAAAKERYLARK 295          
BLAST of Gchil7354.t1 vs. uniprot
Match: A0A6P5GWH8_ANACO (nuclear speckle splicing regulatory protein 1-like n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GWH8_ANACO)

HSP 1 Score: 63.9 bits (154), Expect = 4.130e-8
Identity = 47/134 (35.07%), Postives = 76/134 (56.72%), Query Frame = 0
Query:   68 RKSRYVAKLVQNAKRRKEEAQLVLERRMIREREKEQHLFGHTERFVTPAYKKRLEDN------ERLASVESHEQSEQPSAHNVSQFYTALLHNKTINANETDSERSQPTAHIEPATNKAAQEKLASRTTSQHSH 195
            RKS+Y+  L+  AK+R+ E +++ E+++++ER K+ HLF   E+FVT AYKK+L +       ERL  +   E+ +     ++S FY  L  NK +      +E  +PT H E   N + QE  AS+  ++ SH
Sbjct:   96 RKSKYIEVLMDKAKQREREHEIIYEKKLLKERSKDDHLFADKEKFVTSAYKKKLAEQAKWLEEERLRQIRE-EKEDVTKKKDLSDFYFGL--NKNVAFGARLNEDPKPTQHNEA--NDSTQESQASKQDAKESH 224          
BLAST of Gchil7354.t1 vs. uniprot
Match: A0A1D1ZT88_AUXPR (DUF2040 domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZT88_AUXPR)

HSP 1 Score: 63.5 bits (153), Expect = 6.160e-8
Identity = 37/75 (49.33%), Postives = 52/75 (69.33%), Query Frame = 0
Query:   62 EARNEP-------RKSRYVAKLVQNAKRRKEEAQLVLERRMIREREKEQHLFGHTERFVTPAYKKRLEDNERLAS 129
            EAR EP       R+SRY+A L++ A+ RK E  ++ ER+M++ER  E HLFG  ERFVT AYKK+LE+++R  +
Sbjct:   86 EAREEPKRREKKERQSRYIAGLLEKAEERKREQDVLYERQMLKERAAEDHLFGDKERFVTAAYKKKLEEDQRYVA 160          
BLAST of Gchil7354.t1 vs. uniprot
Match: C1N541_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N541_MICPC)

HSP 1 Score: 61.6 bits (148), Expect = 1.240e-7
Identity = 33/76 (43.42%), Postives = 51/76 (67.11%), Query Frame = 0
Query:   56 QPVQRNEARNEPRKSRYVAKLVQNAKRRKEEAQLVLERRMIREREKEQHLFGHTERFVTPAYKKRLEDNERLASVE 131
            Q + R +     RKSRY+  L++  K R+ E  +V ERR+++ER+KE HL+G  E+FVT AYKK+LE++ +  + E
Sbjct:  103 QKIARADEERTERKSRYIQSLIEKQKEREREDAIVYERRLLKERQKEDHLYGDKEKFVTAAYKKKLEEDAKWLAQE 178          
BLAST of Gchil7354.t1 vs. uniprot
Match: A0A087SH57_AUXPR (Endoglucanase n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SH57_AUXPR)

HSP 1 Score: 63.5 bits (153), Expect = 1.290e-7
Identity = 37/75 (49.33%), Postives = 52/75 (69.33%), Query Frame = 0
Query:   62 EARNEP-------RKSRYVAKLVQNAKRRKEEAQLVLERRMIREREKEQHLFGHTERFVTPAYKKRLEDNERLAS 129
            EAR EP       R+SRY+A L++ A+ RK E  ++ ER+M++ER  E HLFG  ERFVT AYKK+LE+++R  +
Sbjct:   86 EAREEPKRREKKERQSRYIAGLLEKAEERKREQDVLYERQMLKERAAEDHLFGDKERFVTAAYKKKLEEDQRYVA 160          
BLAST of Gchil7354.t1 vs. uniprot
Match: A0A2K3CR81_CHLRE (DUF2040 domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CR81_CHLRE)

HSP 1 Score: 62.4 bits (150), Expect = 2.040e-7
Identity = 35/90 (38.89%), Postives = 63/90 (70.00%), Query Frame = 0
Query:   68 RKSRYVAKLVQNAKRRKEEAQLVLERRMIREREKEQHLFGHTERFVTPAYKKRLEDNERLASVESHEQSEQPSAH-----NVSQFYTALL 152
            R+S+Y+A L++ A++RK E  ++ ERRM++ERE E HL+   ERFVT AY+++LE++++ A  ++ +++E+ +A      ++  FY  LL
Sbjct:  117 RQSKYIASLLEQAQQRKREQDVLYERRMVKEREAEDHLYEGKERFVTGAYRRKLEEDKKWAEEQARKEAEEAAADVRKVGHLGNFYANLL 206          
The following BLAST results are available for this feature:
BLAST of Gchil7354.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3JAU7_9FLOR6.800e-5344.71Nuclear speckle splicing regulatory protein 1 n=1 ... [more]
A0A059LN60_9CHLO3.730e-1030.34DUF2040 domain-containing protein n=1 Tax=Helicosp... [more]
A0A7S0SXB7_9CHLO1.030e-831.07Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
UPI001E1D40101.240e-834.13nuclear speckle splicing regulatory protein 1-like... [more]
A0A2U1KW53_ARTAN2.140e-826.54Cytochrome P450, conserved site-containing protein... [more]
A0A6P5GWH8_ANACO4.130e-835.07nuclear speckle splicing regulatory protein 1-like... [more]
A0A1D1ZT88_AUXPR6.160e-849.33DUF2040 domain-containing protein n=1 Tax=Auxenoch... [more]
C1N541_MICPC1.240e-743.42Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A087SH57_AUXPR1.290e-749.33Endoglucanase n=1 Tax=Auxenochlorella protothecoid... [more]
A0A2K3CR81_CHLRE2.040e-738.89DUF2040 domain-containing protein n=1 Tax=Chlamydo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018612Nuclear speckle splicing regulatory protein 1, N-terminalPFAMPF09745DUF2040coord: 59..139
e-value: 2.5E-17
score: 63.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..266
NoneNo IPR availablePANTHERPTHR30060INNER MEMBRANE PROTEINcoord: 58..273
NoneNo IPR availablePANTHERPTHR30060:SF0COILED-COIL PROTEIN (DUF2040)-RELATEDcoord: 58..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:632698..633540 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7354.t1Gchil7354.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 632698..633540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7354.t1 ID=Gchil7354.t1|Name=Gchil7354.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=281bp
MFDKLSCSSSSSSSSSTKKSKTPFNAVKEAASIISRRRKLPTNPDLQQQI
EHIFSQPVQRNEARNEPRKSRYVAKLVQNAKRRKEEAQLVLERRMIRERE
KEQHLFGHTERFVTPAYKKRLEDNERLASVESHEQSEQPSAHNVSQFYTA
LLHNKTINANETDSERSQPTAHIEPATNKAAQEKLASRTTSQHSHSPSTA
IKQPAGDDRRATTKDSKSVIPGAIATHQTPSPQPRTQQKPSQKRLPNKKR
GVRRNTPQSIEAYRQRYFARRAKRLAEKKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018612NSRP1_N