Gchil7336.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil7336.t1 vs. uniprot
Match: A0A2V3J6V1_9FLOR (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6V1_9FLOR) HSP 1 Score: 145 bits (367), Expect = 2.490e-42 Identity = 70/88 (79.55%), Postives = 79/88 (89.77%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLEDAIRTSSDGLSFWRLPTVLIRGNTVKYIRVPELVLSILDEERAARQQ 88
MLPLSLLKSATGCPILIELKNGETYNAKL +MDLWMN++L DA+RTS DG FW +P + IRGNT+KYIRVPELVL I++EERAARQQ
Sbjct: 1 MLPLSLLKSATGCPILIELKNGETYNAKLHSMDLWMNMSLTDAVRTSRDGNDFWHVPQLYIRGNTIKYIRVPELVLGIVEEERAARQQ 88
BLAST of Gchil7336.t1 vs. uniprot
Match: R7QMG7_CHOCR (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMG7_CHOCR) HSP 1 Score: 115 bits (287), Expect = 3.790e-30 Identity = 54/86 (62.79%), Postives = 67/86 (77.91%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLEDAIRTSSDGLSFWRLPTVLIRGNTVKYIRVPELVLSILDEERAAR 86
MLPLSLLKS+TG PIL+ELKNG+TYN L N+D WMN+ L D IRTS DG FW +P + IRGNT+KY+RVP+ VL + +E+ AR
Sbjct: 1 MLPLSLLKSSTGYPILVELKNGDTYNGHLSNIDQWMNVNLNDVIRTSKDGDHFWSVPEMYIRGNTIKYLRVPDAVLDAVADEKHAR 86
BLAST of Gchil7336.t1 vs. uniprot
Match: R7QHR4_CHOCR (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHR4_CHOCR) HSP 1 Score: 115 bits (287), Expect = 1.780e-29 Identity = 54/86 (62.79%), Postives = 67/86 (77.91%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLEDAIRTSSDGLSFWRLPTVLIRGNTVKYIRVPELVLSILDEERAAR 86
MLPLSLLKS+TG PIL+ELKNG+TYN L N+D WMN+ L D IRTS DG FW +P + IRGNT+KY+RVP+ VL + +E+ AR
Sbjct: 77 MLPLSLLKSSTGYPILVELKNGDTYNGHLSNIDQWMNVNLNDVIRTSKDGDHFWSVPEMYIRGNTIKYLRVPDAVLDAVADEKHAR 162
BLAST of Gchil7336.t1 vs. uniprot
Match: A0A068RWB1_9FUNG (U6 snRNA-associated Sm-like protein LSm4 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RWB1_9FUNG) HSP 1 Score: 108 bits (271), Expect = 7.700e-28 Identity = 55/100 (55.00%), Postives = 69/100 (69.00%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLEDAIRTSSDGLSFWRLPTVLIRGNTVKYIRVPELVLSILDEERAARQQAHQRSRTRRSGG 100
MLPLSLL +A G P+L+ELKNGET+N L N D WMNLTL + I+TS DG FWRLP IRGNT+KY+ VPE ++ ++ EE +Q + R R GG
Sbjct: 1 MLPLSLLHTAAGHPLLVELKNGETFNGHLVNCDNWMNLTLREVIQTSPDGDKFWRLPECYIRGNTIKYLNVPEEIVDMVKEEEG--RQRNMRGNRGRGGG 98
BLAST of Gchil7336.t1 vs. uniprot
Match: W7TE23_9STRA (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TE23_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.940e-27 Identity = 49/90 (54.44%), Postives = 69/90 (76.67%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLEDAIRTSSDGLSFWRLPTVLIRGNTVKYIRVPELVLSILDEERAARQQAH 90
MLPLSLLK+A G P+L+ELKNG+TYN +L + D WMN+TL D I TS DG FW++P +RGN++KY+RVPE V+ +++EE R++ +
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGDTYNGRLVSCDTWMNITLRDVICTSRDGDRFWKIPECYVRGNSIKYLRVPEEVIDMVNEEDLERERTY 90
BLAST of Gchil7336.t1 vs. uniprot
Match: A0A7I8IZY5_SPIIN (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8IZY5_SPIIN) HSP 1 Score: 108 bits (270), Expect = 1.980e-27 Identity = 57/106 (53.77%), Postives = 72/106 (67.92%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLEDAIRTSSDGLSFWRLPTVLIRGNTVKYIRVPELVLSILDEERAARQQAHQRSRTRR--SGGSRSK 104
MLPLSLLK+A G P+L+ELKNGETYN L N D WMN+ L + I TS DG FWR+P IRGNT+KY+RVP+ V+ + EE + + A R R R +GG +K
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETSKSRSARGRGRGREEATGGRPAK 106
BLAST of Gchil7336.t1 vs. uniprot
Match: A0A8H7SAW3_9FUNG (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7SAW3_9FUNG) HSP 1 Score: 108 bits (269), Expect = 2.060e-27 Identity = 52/91 (57.14%), Postives = 66/91 (72.53%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLEDAIRTSSDGLSFWRLPTVLIRGNTVKYIRVPELVLSILDEERAARQQAHQ 91
MLPLSLL +A G P+L+ELKNGET+N L N D WMNLTL + I+TS DG FWRLP IRGNT+KY+ VPE ++ ++ EE +QA +
Sbjct: 1 MLPLSLLHTAAGHPLLVELKNGETFNGHLVNCDNWMNLTLREVIQTSPDGDRFWRLPECYIRGNTIKYLNVPEEIVDMVKEEEIKARQARR 91
BLAST of Gchil7336.t1 vs. uniprot
Match: A0A1X6P2E3_PORUM (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2E3_PORUM) HSP 1 Score: 110 bits (274), Expect = 2.540e-27 Identity = 51/84 (60.71%), Postives = 68/84 (80.95%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLEDAIRTSSDGLSFWRLPTVLIRGNTVKYIRVPELVLSILDEERA 84
MLPL+LL+S+TG P+L+ELKNG+TY+ L ++D WMNL L DA+RTS++G SFW +P V IRGNTVKY+R PE ++ I+ EE A
Sbjct: 1 MLPLTLLRSSTGHPVLVELKNGDTYSGVLVSIDSWMNLNLADAVRTSAEGDSFWSVPKVYIRGNTVKYVRAPEEIVDIVAEEAA 84
BLAST of Gchil7336.t1 vs. uniprot
Match: A0A7S2UV99_9STRA (U6 snRNA-associated Sm-like protein LSm4 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV99_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.610e-27 Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLEDAIRTSSDGLSFWRLPTVLIRGNTVKYIRVPELVLSILDEERAARQQAHQRSRTRRSGGSRSK 104
MLPLSLLK+A G P+L+ELKNG+TYN +L + D WMN+ L + I TS DG FWRLP IRGN++KY+R+P+ V+ +++EE Q R TR GG SK
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGDTYNGRLVSCDSWMNINLREVICTSRDGDRFWRLPECYIRGNSIKYLRIPDEVIDMVNEEAM---QKEVRMATRGRGGRGSK 101
BLAST of Gchil7336.t1 vs. uniprot
Match: A0A397T5Z1_9GLOM (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397T5Z1_9GLOM) HSP 1 Score: 107 bits (267), Expect = 2.680e-27 Identity = 54/104 (51.92%), Postives = 73/104 (70.19%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLEDAIRTSSDGLSFWRLPTVLIRGNTVKYIRVPELVLSILDEERAARQQAHQRSRTRRSGGSRSK 104
MLPLSLL +A G P+L+ELKNGET+N L N D WMNLTL + I+TS +G FWRLP IRGNT+KY+RVP+ ++ ++ E+ ++QA SGG+R +
Sbjct: 1 MLPLSLLNTAQGHPMLVELKNGETFNGHLVNCDNWMNLTLREVIQTSPEGDRFWRLPECYIRGNTIKYLRVPDEIMEMVKEDSIRQRQAA-------SGGNRGR 97 The following BLAST results are available for this feature:
BLAST of Gchil7336.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil7336.t1 ID=Gchil7336.t1|Name=Gchil7336.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=154bpback to top |