Gchil7301.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7301.t1
Unique NameGchil7301.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length569
Homology
BLAST of Gchil7301.t1 vs. uniprot
Match: A0A2V3J4U2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4U2_9FLOR)

HSP 1 Score: 667 bits (1720), Expect = 1.080e-233
Identity = 332/564 (58.87%), Postives = 428/564 (75.89%), Query Frame = 0
Query:    1 MPSLAKTILCERESAAEAPPVTFPEALQKKRRKRSVKPSDLYDALVFEGESRRLSKIWADAMAVTIDGSKVPEGDDLSWRERLEQCRIDGNGEDALNITNEISQKGYVLSARAAITVIEICISAEEYNGAEHALATLESLPQDHPTRTTRLVCIARTFLAMSFTSRGWYDRALQVMQFPAQQFSNGDTKLVDILNGLGLGRDTLAWGVLLKALTKLGRAETAVAVVDVAMRQGVGMTDSLLHLTIDSLRRLNRWKEAEWLFTTAVEKGVKPSEMTLGSILLSLTSRDARAVVSRERIQEIVDMAKHPSTKFMTTALMAITSVGLVERSENLFYEIGQAHSSGVPNEEAFGNLMAGYGNYLQLMPAEAVDDVSTNGKLVDINRKADLLWELYMKHYRISKIGNSSLTTKKMIIGNYLRIKTRSYRIKEAVDILEDIMGSPEMYPALNVRIGHICTAMGAAELCCDVTQLERITAIMRQGGIKHDMRSLAFAVGTYVGDGNLSAALNLVEQHLAEVSESGSISPQFRQHHPLLLLRRIQTLRGALRDSGIKKLKMLDDSIKKFQGK 564
            +PSLAK I  ER  A +AP V+ P    + ++  SV+ SDLY ALV+E ESR  +K+W +AMAVT DGS++ E +D  +R+RLE+        D L + ++I++KGY  SARA I  IE CI+ E+Y  AEHAL+ L++LP+DH TRT RLVCIA+T LA S+TS G Y+ AL+VM FP + F+ GD +L +ILN +GLGRDTLAWGVL+K+LTKLG AETA+AVVDV+MRQGVGMTDSLLHLTIDSLR+L+RW+EA+WLFTTAVEKGVKPSE+TLGSILL+LT + AR VV R R++EIVDMAKHPS KFM  ALMA+TSVGL+ER+E LFYE+G     GV NE+ FG LM GYGNYLQL+  E +D V+ N K  +IN+KADLLWE++++HY       S    K M++ NY+R+KTR ++ KEAVDILE ++ + E YP L V  GHICT +GA EL CDV QL R+  IM+   I HDMRSLAF++GT++GDGNL+AAL LV++HLAEV +  +IS QFRQHHP+LL RR++TLR  LRD+GI  ++ L+D+++  + K
Sbjct:   49 VPSLAKVISTERVRATDAPQVSIPNTPIRSKKSHSVRASDLYTALVYEEESRHHAKLWVEAMAVTQDGSRISEVEDADYRKRLERNDSQQIPRDPLGVISDITRKGYTPSARAFIMAIEACIATEQYESAEHALSILDALPRDHATRTPRLVCIAKTLLAFSYTSTGLYEEALRVMGFPNKPFARGDKQLTEILNSIGLGRDTLAWGVLVKSLTKLGSAETAIAVVDVSMRQGVGMTDSLLHLTIDSLRKLHRWREADWLFTTAVEKGVKPSEITLGSILLTLTGKSARRVVDRARVEEIVDMAKHPSPKFMKVALMALTSVGLMERAEALFYEVGHHQEDGVLNEDIFGYLMTGYGNYLQLLTVEEIDHVTVNRKYEEINKKADLLWEMHVQHYGHQVARRSKREAKNMLLRNYIRVKTRCFKAKEAVDILEQVVLNREKYPMLEVSTGHICTVLGAVELSCDVEQLTRLMHIMQVANINHDMRSLAFSIGTHIGDGNLTAALELVKEHLAEVMKRETISMQFRQHHPILLARRLETLRNGLRDAGIGNVEYLEDAVRSLRRK 612          
BLAST of Gchil7301.t1 vs. uniprot
Match: R7QUU2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUU2_CHOCR)

HSP 1 Score: 272 bits (696), Expect = 1.580e-82
Identity = 148/366 (40.44%), Postives = 224/366 (61.20%), Query Frame = 0
Query:  194 LNGLGLGRDTLAWGVLLKALTKLGRAETAVAVVDVAMRQGVGMTDSLLHLTIDSLRRLNRWKEAEWLFTTAVEKGVKPSEMTLGSILLSLTSRDARAVVSRERIQEIVDMAKHPSTKFMTTALMAITSVGLVERSENLFYEIGQAHSSGVPNEEAFGNLMAGYGNYLQLMPAEAVDDVSTNGKLVDINRKADLLWELYMKHYRISKIGNSSLT-TKKMIIGNYLRIKTRSYRIKEAVDILEDIMGSPEMYPALNVRIGHICTAMGAAELCCDVTQLERITAIMRQGGIKHDMRSLAFAVGTYVGDGNLSAALNLVEQHLAEVSESGSISPQFRQHHPLLLLRRIQTLRGALRDSGIKKLKMLDDSI 558
            L+ L LGRDT+AWGVL+KALTKLG    AVAVVDVA+ + VG+TDSL+HLTID+LR L R ++AEWLF  AV+KG++P E T+ S+LL+LTS+  +  +   RI+++VDM   P+ +F  TAL+ +T+ G ++R E LF +I +    G P+E AF  LMAGY  + ++       +  T    + +  + +  WE +++ Y  SK  +  L   +   +  YLR++T  +R+  AVD+L+ +     +   L V  G +   +GA E+ CDV ++ R+  +M   G++HD+R+L F VGT++GDGN+ AAL LV      +   G      RQ+H  L  RR+  LR AL ++G+ K+K L+  I
Sbjct:   21 LDELKLGRDTVAWGVLVKALTKLGHPGVAVAVVDVALARDVGLTDSLVHLTIDALRALGRPRQAEWLFDEAVQKGLQPRERTVASLLLTLTSKAEKRTLDTARIEQLVDMVPEPTPRFRNTALLVLTAAGSLQRFEKLFKDIAE---EGTPSEHAFSALMAGYEKHFKVGWESGGAEEDTTKARMAVADRVEEQWEAFLQAYGSSKPRSKVLKRVRGAFLHRYLRVQTMCFRLGNAVDVLKRVADGEII--GLEVSAGQVNGVLGAVEMACDVREMRRVLDVMESIGVRHDVRTLTFCVGTHLGDGNVDAALKLVRNEAPRLLAGGYQDEMLRQYHWGLFERRLDMLRSALEEAGVGKVKDLESFI 381          
The following BLAST results are available for this feature:
BLAST of Gchil7301.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4U2_9FLOR1.080e-23358.87Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QUU2_CHOCR1.580e-8240.44Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 76..310
e-value: 9.9E-15
score: 56.7
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 90..517
NoneNo IPR availablePANTHERPTHR47932:SF44ATPASE EXPRESSION PROTEIN 3coord: 90..517

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:997677..999383 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7301.t1Gchil7301.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 997677..999383 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7301.t1 ID=Gchil7301.t1|Name=Gchil7301.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=569bp
MPSLAKTILCERESAAEAPPVTFPEALQKKRRKRSVKPSDLYDALVFEGE
SRRLSKIWADAMAVTIDGSKVPEGDDLSWRERLEQCRIDGNGEDALNITN
EISQKGYVLSARAAITVIEICISAEEYNGAEHALATLESLPQDHPTRTTR
LVCIARTFLAMSFTSRGWYDRALQVMQFPAQQFSNGDTKLVDILNGLGLG
RDTLAWGVLLKALTKLGRAETAVAVVDVAMRQGVGMTDSLLHLTIDSLRR
LNRWKEAEWLFTTAVEKGVKPSEMTLGSILLSLTSRDARAVVSRERIQEI
VDMAKHPSTKFMTTALMAITSVGLVERSENLFYEIGQAHSSGVPNEEAFG
NLMAGYGNYLQLMPAEAVDDVSTNGKLVDINRKADLLWELYMKHYRISKI
GNSSLTTKKMIIGNYLRIKTRSYRIKEAVDILEDIMGSPEMYPALNVRIG
HICTAMGAAELCCDVTQLERITAIMRQGGIKHDMRSLAFAVGTYVGDGNL
SAALNLVEQHLAEVSESGSISPQFRQHHPLLLLRRIQTLRGALRDSGIKK
LKMLDDSIKKFQGKYGIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf