Gchil7282.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7282.t1
Unique NameGchil7282.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length591
Homology
BLAST of Gchil7282.t1 vs. uniprot
Match: R7QS45_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS45_CHOCR)

HSP 1 Score: 313 bits (803), Expect = 1.400e-95
Identity = 196/496 (39.52%), Postives = 277/496 (55.85%), Query Frame = 0
Query:   75 LIIYFTD-ASRQASACCRKAHAQNNNHVVISHDSAAYVASVFRFVSQSHLSYLFSRNCRLGFSSNVTDIVHHAQQQSDFKFA---QVLISRPLVAVDKPRALPNSEQGPVWVADVGREVDILCHELLAQVPLFIRVHRRNKMLASYFREDSSNAVADHIFRRDDYAKEKLHPYLQFIVKPPPAIQSFHVFELASHTHQIVCKAQHVHEDAKRVVDTRSFIASLTEDNCGCVPLSQEIIRLLLSTPYRTELKSFLSIMKPLTALISLYNITGNVPPLSYSSPLFDVNDLFRCPLEFRSRSLAHVLPDCVRTMREIYSEKLPEHEEDMHILREHAMCRLLGKGVDGCPPVADDISCIAALLNPSGDLSNTKGITVDEVLRRAVQYIQTHHSEKGEVGVKTVLDQLEQFHNRKGQFADDNMF--GEASEGVDPLEWWDKFGHVAPELQPIALGVLSVPTTAFAAVQHMTNLNACSEDLQRSVADEEMEKRRFITWNLRL 564
            LIIYF D A+ Q S   R A  +       +   A+ +AS F + S + L Y+ SRNC   F S + ++V  +++      A   QV I RP    ++   +  ++    W++DV REVDIL  +LL QVP+  R  RRN +LAS+FRE  S+  A  +F R+   KE+   Y   I  P    +     E A  T +I+  AQ  H+D +R  +T SF+ ++ E++ G V L QEI RL+LS PY  EL+ F+++MKPL  LI  Y    +   LS S    D+      PL    RSLAHVLPDC  T+R+IY E+ PE E D+ +LR  +  RL+G+G D  PP+  DI  +A  LNP+ +L+  KGITVDE  RRAV ++   +  + +V +   ++QL+ FH R G FA+  +F   + +E  DP  WW K G +AP+L  IAL VL  PT AF  V+  + +N    DL  +  DE MEK+RF+ WNLRL
Sbjct:   98 LIIYFPDYANAQPS---RHALRRQPTEDEGNSGEASMIASTFLWTSGAKLYYIGSRNCSHDFKSCIAELVLQSKETCKLGKAALDQVFIGRPFETSEQSADVTKNDPVNTWISDVPREVDILAQQLLTQVPVLSRCVRRNTLLASFFRETYSSRAAVMLFGRNLAEKEQCARYKAHIALPLQLTRCCDAVENAQQTFKILSHAQSSHKDRQRFQETSSFLHTINEESAGNVQLCQEITRLVLSQPYLNELEIFIAVMKPLAKLIEKYTCVDD--SLSAS----DMGS--SAPLASGGRSLAHVLPDCFSTLRDIYKEQRPELENDLRLLRAMSARRLMGQGGDEYPPIVGDICYLATFLNPTSNLAAMKGITVDESWRRAVSFLHFQYGSRSDVVLDRAIEQLQDFHQRSGAFAEPGIFIAPDETEQEDPRIWWQKHGRLAPDLFTIALKVLDAPTAAFPIVKLASEMNGRHSDLYSTEKDELMEKKRFLLWNLRL 582          
The following BLAST results are available for this feature:
BLAST of Gchil7282.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QS45_CHOCR1.400e-9539.52Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 420..537

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:948813..950585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7282.t1Gchil7282.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 948813..950585 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7282.t1 ID=Gchil7282.t1|Name=Gchil7282.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=591bp
MLANDLPLSTADNPLFQQLLLTAVAPTAPAAQDADHAHSRITHHQLQHHL
SSLSSAQVMHPFADSPPSPHASANLIIYFTDASRQASACCRKAHAQNNNH
VVISHDSAAYVASVFRFVSQSHLSYLFSRNCRLGFSSNVTDIVHHAQQQS
DFKFAQVLISRPLVAVDKPRALPNSEQGPVWVADVGREVDILCHELLAQV
PLFIRVHRRNKMLASYFREDSSNAVADHIFRRDDYAKEKLHPYLQFIVKP
PPAIQSFHVFELASHTHQIVCKAQHVHEDAKRVVDTRSFIASLTEDNCGC
VPLSQEIIRLLLSTPYRTELKSFLSIMKPLTALISLYNITGNVPPLSYSS
PLFDVNDLFRCPLEFRSRSLAHVLPDCVRTMREIYSEKLPEHEEDMHILR
EHAMCRLLGKGVDGCPPVADDISCIAALLNPSGDLSNTKGITVDEVLRRA
VQYIQTHHSEKGEVGVKTVLDQLEQFHNRKGQFADDNMFGEASEGVDPLE
WWDKFGHVAPELQPIALGVLSVPTTAFAAVQHMTNLNACSEDLQRSVADE
EMEKRRFITWNLRLHMGRVKAAEREAVAEGDQTRTEPMLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf