Gchil7278.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7278.t1
Unique NameGchil7278.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length254
Homology
BLAST of Gchil7278.t1 vs. uniprot
Match: A0A2V3J3P1_9FLOR (ER membrane protein complex subunit 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3P1_9FLOR)

HSP 1 Score: 331 bits (848), Expect = 5.820e-112
Identity = 164/248 (66.13%), Postives = 211/248 (85.08%), Query Frame = 0
Query:    6 DALDIPLDRSLQLQVLLPITVVTILMNLLRINLSKLILREPPISLAKTRDSSCLHRAQNVRLNSRTITRVQYEARRFYLLKEDGPLHKPPVNVATMSPLMNPESLANQVLSIIINVVPQMVLGAWARYSFAGIAVCRLPFTLTPRFRPMLQSGLDLSAQYLDVSYVSALSWYVLNLFGNAGLLSLFTSGSTGDDLLIPSALNQISMNVAQDKVFSQEREAVRKSSHNFGLNAFEEQLLQMPVKDFGTY 253
            + LDI LDRSLQL VLLPIT+VTILMNLL+ NL KLI+REPP +L KTRD++ L+RAQ  R N   ++++Q+EARR+Y  +  GPL+KPPV  + MSPLMNP+SLANQVLS++IN++PQM+LG WARY+FAG+ VCRLPFTLTPRFRPMLQSGLD+++Q LD+ YVS+LSWYVLNLFGNAGLLSL ++GS  +D+L+P+AL+QISMNVA DKVF+QER A++KS+H+  L+ FE+++L MP+  FG Y
Sbjct:    6 ETLDIHLDRSLQLWVLLPITIVTILMNLLKRNLLKLIVREPPTTLHKTRDANLLNRAQTFRKNCFAVSKIQFEARRYYFSQGKGPLYKPPVRASAMSPLMNPDSLANQVLSVVINIIPQMLLGVWARYTFAGVVVCRLPFTLTPRFRPMLQSGLDIASQSLDLRYVSSLSWYVLNLFGNAGLLSLVSTGSDYEDILVPNALSQISMNVAADKVFAQERAAIQKSTHSCRLDDFEQRVLLMPLDQFGKY 253          
BLAST of Gchil7278.t1 vs. uniprot
Match: R7Q1Z4_CHOCR (ER membrane protein complex subunit 3 n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7Q1Z4_CHOCR)

HSP 1 Score: 248 bits (632), Expect = 3.780e-79
Identity = 128/246 (52.03%), Postives = 176/246 (71.54%), Query Frame = 0
Query:    7 ALDIPLDRSLQLQVLLPITVVTILMNLLRINLSKLILREPPISLAKTRDSSCLHRAQNVRLNSRTITRVQYEARRFYLLKEDGPLHKPPVNVATMSPLMNPESLANQVLSIIINVVPQMVLGAWARYSFAGIAVCRLPFTLTPRFRPMLQSGLDLSAQYLDVSYVSALSWYVLNLFGNAGLLSLFTSGSTGDDLLIPSALNQISMNVAQDKVFSQEREAVRKSSHNFGLNAFEEQLLQMPVKDFGT 252
            ++DIPLD  L++ VLLPI + T+LM L+R N++ L+ +EPP +L K RD+  L R+  +R N   I   Q+ ARR YL   +G LH      + ++ +MNPESLANQ++S+++ +VP MV+G WARY FAG+AVCRLPFTLTPRFRPMLQSG++L+ Q LDVSYVSALSWY+L++FGN GLLSL + G + D + +PS  +QIS+N+A DKVF+QEREA+ K  H   +   E+ LL +  + F  
Sbjct:    8 SIDIPLDPLLRVWVLLPIWIATLLMGLVRRNVTALMTKEPPTTLFKHRDAGYLKRSVKLRQNFSAIAYEQFAARRQYLAGPEGVLHVAKKEKSALTAIMNPESLANQIMSVVMAIVPHMVMGTWARYMFAGMAVCRLPFTLTPRFRPMLQSGIELAGQNLDVSYVSALSWYLLSMFGNGGLLSLISKGHSDDFVFVPSVASQISLNMAPDKVFAQEREALGKIVHKHTMGQEEDALLMIDPESFAV 253          
BLAST of Gchil7278.t1 vs. uniprot
Match: A0A7S1XFD9_9RHOD (ER membrane protein complex subunit 3 (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFD9_9RHOD)

HSP 1 Score: 148 bits (373), Expect = 3.380e-40
Identity = 85/206 (41.26%), Postives = 129/206 (62.62%), Query Frame = 0
Query:   10 IPLDRSLQLQVLLPITVVTILMNLLRINLSKLILREPPISLAKTRDSSCLHRAQNVRLNSRTITRVQYEARRFYLLKEDGPLHKPPVNVATMSP-LMNPESLANQVLSIIINVVPQMVLGAWARYSFAGIAVCRLPFTLTPRFRPMLQSGLDLSAQYLDVSYVSALSWYVLNLFGNAGLLSLFTSG-STGDDLLIPSALNQISMNV 213
            + LD  ++  VLLPI++ T +M +LR+ LS+ ++REP + L + RD+  + R   ++ +   +   Q   RR + +KEDG + +   N  +    LM+PE L+ + + +I + VPQM+ GAW R+ F G AVCRLPF    RFR MLQSG++++ + LDV+YVSALSWY++NLFGN  L  LF S  +T +    P+ LNQ  M +
Sbjct:   28 VSLDPRIRTWVLLPISIATFVMGILRMYLSRWLMREPRVVLHRVRDAGLIARWMAIQRDGGILPEEQLAMRRHWFVKEDGGVFREERNPRSAHMMLMDPEMLSQKTIELICSAVPQMLFGAWVRFFFGGFAVCRLPFGPPQRFRAMLQSGIEIAGRDLDVAYVSALSWYIINLFGNQCLFMLFMSHEATEEPRGPPNDLNQTMMKL 233          
BLAST of Gchil7278.t1 vs. uniprot
Match: A0A7S0G2H7_9RHOD (ER membrane protein complex subunit 3 (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G2H7_9RHOD)

HSP 1 Score: 125 bits (315), Expect = 1.940e-31
Identity = 72/186 (38.71%), Postives = 117/186 (62.90%), Query Frame = 0
Query:    9 DIPLDRSLQLQVLLPITVVTILMNLLRINLSKLILREPPISLAKTRDSSCLHRAQNVRLNSRTITRVQYEAR-RFYLLKEDGPLHKPPVNVATMSPLMNPESLANQVLSIIINVVPQMVLGAWARYSFAGIAVCRLPFTLTPRFRPMLQSGLDLSAQYLDVSYVSALSWYVLNLFGNAGLLSLFTS 193
            D+ LD  ++  VL+P+ +VT  M ++  +L  L+ R P I   K R+ + L R    + N+  +   Q+ +R  F++  +D  L++P    + ++  M+P+ +A+Q+   +++ +PQMV GA+ RY+F G  VC++PF L  RF  MLQSG++L+++ LDV+YVSALSWYVLNLFG  G+  L  S
Sbjct:   34 DLHLDVRIRDWVLIPVAIVTFCMGIMLQSLGILVRRPPKIHQHKIREGATLTRLGQFKRNAGVLPPDQFASRLAFFVEGDDAFLNQPKPEKSFLNSFMSPDFMASQLTESMLSFLPQMVFGAFIRYTFGGFTVCKVPFPLPQRFGSMLQSGIELASRDLDVTYVSALSWYVLNLFGYQGVYRLVLS 219          
BLAST of Gchil7278.t1 vs. uniprot
Match: A0A7S3BER3_9VIRI (ER membrane protein complex subunit 3 n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BER3_9VIRI)

HSP 1 Score: 122 bits (306), Expect = 4.030e-30
Identity = 85/245 (34.69%), Postives = 132/245 (53.88%), Query Frame = 0
Query:    7 ALDIPLDRSLQLQVLLPITVVTILMNLLRINLSKLILREPPISLAKTRDSSCLHRAQNVRLNSRTITRVQYEARRFYLL-KEDGPLHKPPVNVATMSPLMN-PESLANQVLSIIINVVPQMVLGAWARYSFAGIAVCRLPFTLTPRFRPMLQSGLDLSAQYLDVSYVSALSWYVLNLFGNAGLLSLF---TSGSTGDDLLIPSALNQISMNVAQDKVFSQEREAVRKSSHNFG-LNAFEEQLLQM 245
            A+ + LD +++  VLLPIT V  L+ LLR  + +L   EP + L   ++   + RAQ +R N   +    Y +R+ +   KE G L K   +V   + +M+ P  + + +   +  +VPQM+ GAW  + F G  + ++PF LT RFR MLQ G+DL++  LDV+YVS+LSWY LNLFG  GL  L     S    D  L+      + M +   K F+ E + +    HN   ++ FE + L++
Sbjct:    5 AVAVMLDPAIRAWVLLPITFVMFLIGLLRHFVMQLTKAEPKVDLDNIKEGQTVMRAQWLRTNGVFLPEAAYASRKAHFAHKEHGVLRKETQSVNPQAAMMSDPTMMMDMMKKNVHMIVPQMLTGAWVNFFFTGFVIAKIPFPLTQRFRTMLQRGIDLAS--LDVTYVSSLSWYFLNLFGLRGLNQLVLGRASEEIDDTKLMGMQQQMMGMGMDTSKAFAAELQQMEFMRHNPAVMDGFEPRALKL 247          
BLAST of Gchil7278.t1 vs. uniprot
Match: I1BY88_RHIO9 (ER membrane protein complex subunit 3 n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BY88_RHIO9)

HSP 1 Score: 120 bits (300), Expect = 6.400e-29
Identity = 89/260 (34.23%), Postives = 140/260 (53.85%), Query Frame = 0
Query:   12 LDRSLQLQVLLPITVVTILMNLLRINLSKLILREPPISLAKT-RDSSCLHRAQNVRLNSRTITRVQYEARRFYLLK--EDGPLHKPPV----NVATMSPLMNPESLANQVLSI---IINVVPQMVLGAWARYSFAGIAVCRLPFTLTPRFRPMLQSGLDLSAQYLDVSYVSALSWYVLNLFGNAGLLSLFT--SGSTGDDLLIPSALNQISMNVAQD-------KVFSQEREAVRKSSHNFGLNAFEEQLLQMPVKDFGT 252
            LD +++  VL+P+ VV +L+ +LR +++ LI   P     K+ R+S  L RA  +R     I +  +E R+ YL    E G   K P     N    +P+ +PE +   +  +   ++N+VPQM++  W  + F G  V +LPF LTPRF+ MLQSG+D   + +DV++VS+LSWY LNLFG   + SL    + + G D+   SA+  +   + Q        K+F  E+E V  + H + L+  EE+LL+   K   T
Sbjct:    9 LDPAIRDWVLIPVMVVMVLVGVLRHHITMLITGAPKTPQPKSIRESKALLRAMRLRTFGNMIPQHAFEVRKAYLADAFEKGDYLKNPQANKENTTPPNPMTDPEMMEGMMDGLKKQMMNMVPQMIIMGWINFFFQGFVVIKLPFPLTPRFKSMLQSGVD--TRDMDVTWVSSLSWYFLNLFGLGSVFSLILGDNNAAGVDMTAMSAMPGMMPGMGQPGQPQDFKKLFMAEKENVMITPHAWDLDDIEERLLKKYGKKVAT 266          
BLAST of Gchil7278.t1 vs. uniprot
Match: A0A2I0B526_9ASPA (ER membrane protein complex subunit 3 n=3 Tax=Orchidaceae TaxID=4747 RepID=A0A2I0B526_9ASPA)

HSP 1 Score: 117 bits (292), Expect = 3.350e-28
Identity = 83/249 (33.33%), Postives = 131/249 (52.61%), Query Frame = 0
Query:    9 DIPLDRSLQLQVLLPITVVTILMNLLRINLSKLILREPPISLAKTRDSSCLHRAQNVRLNSRTITRVQYEARRFYLLKED-GPLHKPPVNVATMSPLM--NPESLANQVLSIIINVVPQMVLGAWARYSFAGIAVCRLPFTLTPRFRPMLQSGLDLSAQYLDVSYVSALSWYVLNLFGNAGLLSLFTSGSTGDDLLIPSALNQISMN---VAQDKVFSQEREAVRKSSHNFGLNAFE---EQLLQMPVK 248
            D+ LD +++  VL+P++VV +L+ +LR  ++KL+     + L   R+   + RA+++R  +  +    + ARRFY   E+ G LH P          M  +P    + +   +  ++PQ +  AW  + F+G    ++PF LTPRFR MLQ+G+DLS   +DVSYVS+ SWY LNLFG  GL SL      G++  +      + M    V   K  S E++ +    H + L   E   EQ+L+  VK
Sbjct:    4 DLVLDTAIRDWVLVPLSVVMVLIGILRYFVAKLMRSSQALDLKIVREGQLILRARSLRAAAGFVPAKSFRARRFYYTNEENGLLHVPKGQAQNTQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTPRFRSMLQNGIDLST--VDVSYVSSRSWYFLNLFGLRGLFSLIL----GEENAMDDTQRMMQMGGFGVDPTKNLSTEKDGLDIIQHEWALPKIEQRAEQILRKLVK 246          
BLAST of Gchil7278.t1 vs. uniprot
Match: A0A5J4Z1Y5_PORPP (ER membrane protein complex subunit 3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1Y5_PORPP)

HSP 1 Score: 119 bits (298), Expect = 8.390e-28
Identity = 89/258 (34.50%), Postives = 144/258 (55.81%), Query Frame = 0
Query:    9 DIPLDRSLQLQVLLPITVVTILMNLLRINLSKLILREPPISLAKTRDSSCLHRAQNVRLNSRTITRVQYEARR-FYLLKED--GPLHKPPVNVATMSPLMNPESLANQVLSIIINVVPQMVLGAWARYSFAGIAVCRLPFTLTPRFRPMLQSGLDLSAQYLDVSYVSALSWYVLNLFGNAGL--LSLFTSGSTGDDL------LIPSALNQIS--MNVAQDKVFSQEREAVRKSSHNFGLNAFEEQLLQM-PVKDFGT 252
            D+ LD ++ + VLLPI+VVT L+ ++R +LS  + + P +   + +  + +   + ++     I   Q+  RR F++  +D  G   +    V+  S   NP++L+ +V  ++   +P M LGAW R+ F G AV +LPF L+  FR MLQ G++++ + L V+YVSALSWYVL+LFG++ L  L +F S +  DD       +  S  +Q+S    +A +K    ERE  +  SH F + A E+ LL + P    GT
Sbjct:   10 DLVLDPAIAVWVLLPISVVTFLVMVIRHHLSVCLFKLPRVYYYRAKLVAHMQYFRALKFYGGLIPTEQFAMRRAFFIDPQDQRGYFFREVQTVSIASSFANPDALSGKVREMLAGSLPSMALGAWVRFFFGGFAVIKLPFPLSEAFRGMLQMGIEMTGRDLAVNYVSALSWYVLSLFGSSVLFRLLMFNSEAITDDSAEWYENIARSLSDQLSDSQELAIEKEIVAEREEFKFRSHTFQVPASEQFLLGLNPDSILGT 267          
BLAST of Gchil7278.t1 vs. uniprot
Match: A0A1E4REC4_9ASCO (ER membrane protein complex subunit 3 n=1 Tax=Hyphopichia burtonii NRRL Y-1933 TaxID=984485 RepID=A0A1E4REC4_9ASCO)

HSP 1 Score: 115 bits (288), Expect = 1.670e-27
Identity = 88/258 (34.11%), Postives = 139/258 (53.88%), Query Frame = 0
Query:    7 ALDIPLDRSLQLQVLLPITVVTILMNLLRINLSKLILREPPISLAK-TRDSSCLHRAQNVRLNSRTITRVQYEARR-FYLLKEDGPLHKPPVNVATMSPLMNP-------ESLANQVLSIIINVVPQMVLGAWARYSFAGIAVCRLPFTLTPRFRPMLQSGLDLSAQYLDVSYVSALSWYVLNLFGNAGLLSLFTSGSTGDDLLIPSALNQISM-NVAQ------DKVFSQEREAVRKSSHNFGLNAFEEQLL-QMPV 247
            +LD+ LD  L+  VLLPIT   +L+ LLR N++ L+  +P +   K +R+   L RA   R N+  +T+ +++ R+ +YL K +       +  ++ +P  NP       ++L N     ++N +PQ ++  W  Y FAG  + +LPF LT  F+ MLQ+G+  +   LDV YVSA+SWY +NLFG   + SL    ST  D LI     Q ++ N+        DKVF  E E ++  SH+   +   E++L Q P+
Sbjct:    3 SLDLILDPQLKYWVLLPITFAMVLVGLLRSNVTLLLKPQPKLEGYKESREKQFLKRAACFRSNNGLLTKDEFDIRQQYYLEKLNSTEFYAKIESSSATPA-NPFTDGATNDALVNMAKGSLMNYIPQTLIMGWVNYFFAGFVIMKLPFPLTDGFKSMLQNGV--ATPDLDVKYVSAISWYFVNLFGLRPIYSLLMGDSTAADELISQQQQQQALPNIGGPGGPKVDKVFKAEAENIQILSHDSLYDGIVERVLNQYPI 257          
BLAST of Gchil7278.t1 vs. uniprot
Match: A0A367JT44_RHIST (ER membrane protein complex subunit 3 n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367JT44_RHIST)

HSP 1 Score: 114 bits (284), Expect = 1.470e-26
Identity = 94/270 (34.81%), Postives = 143/270 (52.96%), Query Frame = 0
Query:    6 DALDIPLDRSLQLQVLLPITVVTILMNLLRINLSKLILREPPISLAKT-RDSSCLHRAQNVRLNSRTITRVQYEARRFYLLK--EDGPLHKPP--VNVAT--MSPLMNPESLANQVLSI---IINVVPQMVLGAWARYSFAGIAVCRLPFTLTPRFRPMLQSGLDLSAQYLDVSYVSALSWYVLNLFGNAGLLSLFTSG--STGDDLLIPSAL---------NQISMNVAQD--KVFSQEREAVRKSSHNFGLNAFEEQLLQMPVKDFGT 252
            DA  + LD +++  VL+PI +V +L+ +LR +++ LI   P     K  R+S  L R   +R    +I +  +  R+ YL    E G   K P     AT  ++P+M+P+ + +    +   ++N+VPQMV+  W  + F G  V +LPF LTPRF+ MLQSG+D   + +DV++VS+LSWY LNLFG   + SL   G  + G D+   SA+          Q      QD  K+F  E+E V  + H + L   EE+LL+   K   T
Sbjct:    3 DAQRMILDPAIRNWVLIPIMIVMVLVGILRHHITMLITGTPKAPQLKAIRESKALLRGLRLRTVGNSIPQHAFSVRKAYLADAFEKGKYLKNPNAAKEATKPVNPMMDPDMMDSXXEGMKKQLMNMVPQMVIMGWINFFFQGFIVIKLPFPLTPRFKQMLQSGVD--TRDMDVTWVSSLSWYFLNLFGLGSVFSLILGGENAAGVDMTAMSAMPGMMPGAXPGQGQPGQPQDFNKLFLAEKENVMITPHIWDLEDVEERLLKKYGKSVQT 270          
The following BLAST results are available for this feature:
BLAST of Gchil7278.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3P1_9FLOR5.820e-11266.13ER membrane protein complex subunit 3 n=1 Tax=Grac... [more]
R7Q1Z4_CHOCR3.780e-7952.03ER membrane protein complex subunit 3 n=2 Tax=Chon... [more]
A0A7S1XFD9_9RHOD3.380e-4041.26ER membrane protein complex subunit 3 (Fragment) n... [more]
A0A7S0G2H7_9RHOD1.940e-3138.71ER membrane protein complex subunit 3 (Fragment) n... [more]
A0A7S3BER3_9VIRI4.030e-3034.69ER membrane protein complex subunit 3 n=1 Tax=Pras... [more]
I1BY88_RHIO96.400e-2934.23ER membrane protein complex subunit 3 n=1 Tax=Rhiz... [more]
A0A2I0B526_9ASPA3.350e-2833.33ER membrane protein complex subunit 3 n=3 Tax=Orch... [more]
A0A5J4Z1Y5_PORPP8.390e-2834.50ER membrane protein complex subunit 3 n=1 Tax=Porp... [more]
A0A1E4REC4_9ASCO1.670e-2734.11ER membrane protein complex subunit 3 n=1 Tax=Hyph... [more]
A0A367JT44_RHIST1.470e-2634.81ER membrane protein complex subunit 3 n=1 Tax=Rhiz... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002809Integral membrane protein EMC3/TMCO1-likeSMARTSM01415DUF106_2coord: 9..200
e-value: 1.7E-32
score: 123.9
IPR002809Integral membrane protein EMC3/TMCO1-likePFAMPF01956EMC3_TMCO1coord: 9..190
e-value: 1.3E-29
score: 103.1
IPR008568ER membrane protein complex subunit 3PANTHERPTHR13116UNCHARACTERIZEDcoord: 9..245
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..253
NoneNo IPR availableTMHMMTMhelixcoord: 15..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:940361..941122 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7278.t1Gchil7278.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 940361..941122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7278.t1 ID=Gchil7278.t1|Name=Gchil7278.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=254bp
MTLRDDALDIPLDRSLQLQVLLPITVVTILMNLLRINLSKLILREPPISL
AKTRDSSCLHRAQNVRLNSRTITRVQYEARRFYLLKEDGPLHKPPVNVAT
MSPLMNPESLANQVLSIIINVVPQMVLGAWARYSFAGIAVCRLPFTLTPR
FRPMLQSGLDLSAQYLDVSYVSALSWYVLNLFGNAGLLSLFTSGSTGDDL
LIPSALNQISMNVAQDKVFSQEREAVRKSSHNFGLNAFEEQLLQMPVKDF
GTY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002809EMC3/TMCO1
IPR008568EMC3