Gchil7267.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7267.t1
Unique NameGchil7267.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length865
Homology
BLAST of Gchil7267.t1 vs. uniprot
Match: A0A2V3IXL1_9FLOR (TAF4 domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXL1_9FLOR)

HSP 1 Score: 707 bits (1824), Expect = 1.880e-239
Identity = 484/1000 (48.40%), Postives = 598/1000 (59.80%), Query Frame = 0
Query:    1 METNKNLDELLAAIGDGSANAANSAARVKQAPAQTRNPTAAFPPAPQIPIPSAPQAMSRPLSSTMNTAPSRPN------VNGHYNDLLSLLQRQGTPAANQQLPRSQNPPAARMPASARLSFVPGGRPTPSQALDPKALAALKRQHEIQAAQAKQRRESLTNVSTINRN-PPAVPVTRMNSQGFPTGIPPGV---NVPTMGT--STNQESQLNPNVSAQQRPNSAAQQGQP-----RSITQEQVIVGHFCRHAIKTLKKIVEGLPYAAQVELRLREHIKAVWSQWVKGMITRPQLLQSVSNFVKQSTPNAKDVDVIRDFKAWYEHEYELQKQRN----RQ--PQPPKQVRHPQAPGQDVRHVNNVPAHPGSQAVRTNLPPQSVSAARGQLKQEPQRPTIVHTAGKTIGTKP---------------------------------------------------------------EPTIAAP-------------------------GRAMIP-KNAGXXXXXXXXXXXX-----------------GKSPAAYQFQAGVHAGIHPGGNVQINYAHHQLQPQISAKRSLDS-NISSPPNAVKKAKTASKVPKAATSKKKPSLPVGIPLALKGTRPPIQKPDQRNKGAKRPMASGA-LPPPGPVPISVGNPSAEIM----QKKARRQEDLKEINLVDNVVDIEDEEVKLNVDANGKRQSVDEVVRYNPDMIVSGPILRMKMQSIAKSHGIHENISNEATELMSLAVRERLACILESLKTIASVRVGAEKEQWGRVETGLDIREKLQRAREDEERTLQVAAEMRVKRRKEQKEAEAKRFAGEAAKNDKSAKDSSAAXXXXXXXXLALEKXXKESSSQRDALSGLVRDFDRRRRRASAKPLAPLKPLGKPG-LPPLAKRPSSDSLGRSGLKPLGSLDKLKM-GPLVKLGGRSNSPIPRGLGRDPVAPQVRLRVTLMDCLFLFESERNTKKSCLLYKWYARLPCG 863
            M+ +KNL+ELLAAIG+GS    N+A R   + A   N  +AFP  P I IP+ PQ +SRP S+ +  AP+ P       V+GHY +L++LLQRQ   A N QL ++ NP   R+     +  VP G   P+Q+LDPKA+AAL+R+ +IQAAQ KQRRE+  N++   +  PP+ P  R  SQG P GI   V   +VP  G    T +  + + N+ A QRP SA+Q GQ      R+I QEQ IV HFC HAIKT+ K++EG P+AAQ++ RLREHIK VWSQWV+G+I+RPQL QSV+ FVKQS P AKDVDVIRDFKAWYEHEYE+Q+QR     RQ   +   QV   +AP Q V  V +   H  SQAVR N+ PQ + +AR Q+K E     +   +GKTIGTKP                                                               + T+A+                          G++++P KN                               GKSPAAY F    H G+    N+Q+ Y H   Q  +  KR LD+ + SSPPNA+K+AK A K  KA   KKKP+  VG P   KG RPP+ K D +N+  KRP A GA L   G    +   P  +++    QKK RR EDLKEINLVDNVVDIEDEEVKL VDA+GK Q+V++VV+Y+ DMI++GP LR KM +IAK   + E  + EA E+MSLAVRERLA ILESLK IA+ R+ + KEQWG V TG++IREKL+R R+DEER LQVAAEMRVKRRKE                          XXXXXXX LALEK XKESSSQRDA+SGL+R+FDRRRRRA AKPLAPLKPL KPG LPP+ KRP+S+S GR GLKPLGSLD LK  GPL KL GRSNS +PRGLG+ PV   V+LRVTL DCLFLFES+RNT+KS L++KWYARL CG
Sbjct:    1 MDKSKNLNELLAAIGNGSTAPKNAAPRGTSSSAPASNQPSAFPQRPAISIPTIPQPISRPTSTNVGAAPTAPTAAAPPTVDGHYKELVTLLQRQPATAVNPQLQQAANPNTRRVATGNPMPLVPPGSQIPTQSLDPKAVAALRRRQQIQAAQVKQRREAYANINRSTQPVPPSFP--RSTSQGIPAGIQSVVGTRSVPGNGRIEHTQEGMRNSSNLVAPQRPASASQSGQSHASNSRTIAQEQAIVVHFCHHAIKTVTKLMEGRPFAAQIDARLREHIKVVWSQWVRGLISRPQLFQSVATFVKQSNPAAKDVDVIRDFKAWYEHEYEMQRQRTLDQRRQGHQEDQNQVPSQEAPTQTVSRVVSHAVHGISQAVRPNVAPQHMVSARSQMKAEQAVIGVPRPSGKTIGTKPVAIRGVAVNRVPPQAPGVGRGPGKSIANKSIGGSGLQGAVIVANSVSSHAMVQKTTPTGQSANKQTVASAMPVSRTESSPKGPQRVIPQAGKSIGGKSLLPNKNTAQSKPKPPRRPAQKTTPKGPVKTPPKGAGKGKSPAAYPF----HGGMPSSSNLQVGY-HAHAQSHLPGKRVLDNASSSSPPNALKRAKPAPKPSKAPLGKKKPAAAVGNPGPGKGARPPVPKLDPKNRAGKRPAAPGAGLVHSGGASTA---PGVQVLDGAGQKKVRRHEDLKEINLVDNVVDIEDEEVKLKVDASGKPQTVEDVVQYSSDMILAGPRLRKKMGTIAKRTDMTEGFTKEAMEVMSLAVRERLASILESLKPIATSRLDSAKEQWGTVATGMNIREKLERMRQDEERALQVAAEMRVKRRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLALEKKXKESSSQRDAMSGLIREFDRRRRRA-AKPLAPLKPLSKPGGLPPIPKRPNSESFGRPGLKPLGSLDSLKAAGPLFKL-GRSNSAVPRGLGKAPVQTNVKLRVTLRDCLFLFESDRNTRKSTLIHKWYARLQCG 988          
BLAST of Gchil7267.t1 vs. uniprot
Match: R7Q6Z9_CHOCR (TAF4 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6Z9_CHOCR)

HSP 1 Score: 318 bits (815), Expect = 2.290e-91
Identity = 292/818 (35.70%), Postives = 390/818 (47.68%), Query Frame = 0
Query:  216 QGQPRS--ITQEQVIVGHFCRHAIKTLKKIVEGLPYAAQVELRLREHIKAVWSQWVKGMITRPQLLQSVSNFVKQSTPNAKDVDVIRDFKAWYEHEYELQKQ---RNRQPQPPKQVRHP-QAPGQDVRHVNNVPAH----------------PGSQAVRTNLPPQSV-------SAARGQ---------LKQEPQRPTIVHTAGKTIGTKPEPT--IAAPGRAMIPKNAGXXXXXXXXXXXXGKS--------PAAYQFQAGVHAGIHPGGNVQINYAH-------------------HQLQPQISAKRSLDSNISSPPNAVKKA---------------KTASKVPKAATSKKKPSLPV-------------------------GIPLALKGTRPPI-----QKPDQRNKGAKRPMASGALPPPGPVPISV---------------------------------GNPSAEIMQKKARRQEDLKEINLVDNVVDIEDEEVKLNVDANGKRQSVDEVVRYNPDMIVSGPILRMKMQSIAKSHGIHENISNEATELMSLAVRERLACILESLKTIASVRVGAEKEQWGRVETGLDIREKLQRAREDEERTLQVAAEMRVKRRKEQKEAEAKRFAGEAAKNDKSAKDSSAAXXXXXXXXLALEKXXKESSSQRDALSGLVRDFDRRRRR-ASAKPLAPLKPLGKP------------GLPPLAKRPSS--------DSLGRSGLKPLGSLDKLK-MGPLVKLGGRSNSPIPRGLGRDPVA------PQVRLRVTLMDCLFLFESERNTKKSCLLYKWYARL 860
            QG+P++  I+QEQVIVGHFCR AIKTL K++EG P     E+ L+EHIK  W+QWV+G I R +LL+SV+ FV+ S P A  +D+IR+FK WYE E+E QK    R  +  P +Q +H  Q   + V     +P H                PG+ A      P +V       S A G+         +K+E Q P    T GK+I  K  P+   ++P    +  +              GKS        PAA+    G  A   P  +V    A                    H++ P    K    + +    NA K +               KT SK    +  ++KPSLPV                         G P      +P       + P  R K    P ++    P  P P  +                                 G        +KA+R +D  E+NLV++VVD++DE  KL  DA      V E++ Y+P M++SGP LR KMQ  AK + + ENIS +A E++SLAV+ERL  +LESLK IA VR+ A KE W     G ++ EKL+  REDEER+L VAAE+RVKR+KEQ+E EAK+ AGEA             XXXXX   +ALEK  KE+SSQRDALSGLV   D+RR++ A+ K LA L PL  P             LPP+ K  SS         S+G +G K +  L+KLK + PLV LGG   S +P   G +P A      PQ +L +TL DC+FL ESE+NT+KS  +YKWYARL
Sbjct:  105 QGRPQAAKISQEQVIVGHFCRFAIKTLTKVMEGSPLKQTAEVSLKEHIKKAWAQWVRGHIPRQKLLESVARFVRDSCPQAFGIDLIREFKEWYESEFERQKAQSGRGERKVPQQQFQHVGQQQRRQVVQNKQIPLHIHQMKQQQARSAALQPPGANAKMQYSMPGTVPGRAAVGSKASGKEAQLINPHIVKKEAQLPG--KTGGKSISRKTVPSRKTSSPNTPKVGASRAAPGKAPGVRSIGGKSILRPPSTLPAAHVALKGPTATNVPKVSVMGGVAGKAVTGSKGLLANKLPAGLVHKVAPGTKPKGPRKAPVK---NAAKTSXXXXXXXXXXXXXXXKTISK---GSVVRQKPSLPVISGSAGAGSAAVAPGSIKRPFDAGSGSPTGSSMKKPKXXXKASKGPTNRRKAGPFPSSTDPNRPTKPQPARIDTAKGRTGPGTNMGSGGGSALATGKGGSSNSAPGGTGPGTQVRKAKRVDD--ELNLVNDVVDLDDEVDKLGEDAGVVNTEVIEIIDYDPGMLLSGPALRTKMQVTAKRYALSENISKDAMEIVSLAVQERLRNLLESLKGIARVRIEANKESWNTEYFGQNVHEKLELMREDEERSLTVAAELRVKRKKEQEEREAKKLAGEAXXXXXXXXXXXXXXXXXXKEKIALEKKRKENSSQRDALSGLVAGIDKRRKKPATGKGLAGLAPLLPPITKSGGSRTSGSSLPPIPKLVSSAGGDSMSNKSVGTNG-KKIDQLEKLKALCPLVSLGGPRTSSMP---GTEPSAKKDVPKPQPKLPLTLRDCIFLMESEQNTRKSSHIYKWYARL 908          
BLAST of Gchil7267.t1 vs. uniprot
Match: R7QKK4_CHOCR (TAF4 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKK4_CHOCR)

HSP 1 Score: 142 bits (358), Expect = 5.750e-31
Identity = 115/329 (34.95%), Postives = 176/329 (53.50%), Query Frame = 0
Query:  555 EINLVDNVVDIEDEEVKLNVDANGKRQSVDEVVRYNPDMIVSGPILRMKMQSIAKSHGIHENISNEATELMSLAVRERLACILESLKTIASVRVGAEKEQWGRVETGLDIREKLQRAREDEERTLQVAAEMRVKRRKEQKEAEAKRFAGEAAKNDKSAKDSSAAXXXXXXXXLALEKXXKESSSQRDALSGLVRDFDRRRRRA-------SAKPLAPL-KPLGKPG-----LPPLAKRPSSDSLGRSGLKPLGSLDKLKMGPLVKLGG---RSNSPIPRGLGRDPVAPQVRLR---VTLMDCLFLFESERNTKKSCLLYKWYARLPCGK 864
            ++ L+ NVVD++ EE  L  D         E V YN  ++++   L  ++++ A+ + + E++S +A E++SLAV ERL  ILESLK  +SVRV A+K+ W        +REKL R  E+EER+L   A++R+K++KE  + EA R +      +        A        +A EK  + S++ + ALSG++    + RR+A       S+K L PL K  GK       LPPL  R  S  + +     L   D+   G L+K+GG    + S +P+G+    VA + + R   +TL DCLFL ESE+ T++S  LYKWY RL   +
Sbjct:  704 DLALLGNVVDLDYEESFLAHDEKTAGDGDMEAVGYNDGLLLTANALGKRIKAAARRNHLKESVSRDAMEIISLAVCERLKSILESLKVASSVRVDADKDLWTTAVPDETVREKLGRLFEEEERSLDEKAKLRLKKKKELADIEAMRVSKMVIGEENDKTPRLVASKAGRKARIAREKSLETSNNHKKALSGVLAGIQKMRRKANFEKPLGSSKALLPLIKGSGKLQNITSILPPLPTRNVSGGIIQRRTDELDRTDRKHEG-LLKMGGPETTNRSHLPKGI----VAVRRKKRKYGLTLKDCLFLMESEQTTRRSYALYKWYGRLDASR 1027          
BLAST of Gchil7267.t1 vs. uniprot
Match: R7Q6F3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6F3_CHOCR)

HSP 1 Score: 118 bits (296), Expect = 8.170e-27
Identity = 56/101 (55.45%), Postives = 76/101 (75.25%), Query Frame = 0
Query:  216 QGQPRS--ITQEQVIVGHFCRHAIKTLKKIVEGLPYAAQVELRLREHIKAVWSQWVKGMITRPQLLQSVSNFVKQSTPNAKDVDVIRDFKAWYEHEYELQK 314
            QG+P++  I+QEQVIVGHFCR AIKTL +++EG P     E+ L+EHIK  W+QWV+G I R +LL+SV+ FV+ S P A  +D+IR+FK WYE E+E Q+
Sbjct:   36 QGRPQAAKISQEQVIVGHFCRFAIKTLTEVMEGSPLKQTAEVSLKEHIKKAWAQWVRGHIPRQKLLESVARFVRDSCPQAFGIDLIREFKEWYESEFERQR 136          
BLAST of Gchil7267.t1 vs. uniprot
Match: R7QTB8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTB8_CHOCR)

HSP 1 Score: 124 bits (310), Expect = 5.240e-26
Identity = 119/341 (34.90%), Postives = 165/341 (48.39%), Query Frame = 0
Query:    1 METNKNLDELLAAIGDGSANAANSAARVKQAPAQTRNPTAAFPPAPQIPIPSAPQAM---SRPLSSTMNTAPSRPNVNGHYNDLLSLLQRQGTPAANQQL--PRSQN--------PPAARMPASARLSFVPGGRPTPSQALDPKALAALKRQHEIQAAQAKQRRESLTNVSTINRNPPAVPVTRMNSQGFPTGIPPGVN------VPTMGTSTNQE--SQLNP--NVSAQQRP--NSAAQQGQPRS--ITQEQVIVGHFCRHAIKTLKKIVEGLPYAAQVELRLREHIKAVWSQWVKGMITRPQLLQSVSNFVKQSTPNAKDVDVIRDFKAWYEHEYELQK 314
            M  NKNL+EL+AAIGD               P  +  P   F P   +PI + P+     SRP  +   +     +V G+ ++L+  L      A    L  P+ QN        P    MP  AR           ++A D K  A   RQ ++QA +A  +RE   +V    R          +SQ   +   P +       +   GTST+    S+  P   +  Q+ P    A  QG+P++  I+QEQVIVGHFC  AIKTL K++EG P     E+ LREHIK  W+QWV+G I R +LL+SV+ FV+ S P A  +D+IR+FK WYE E+E QK
Sbjct:    1 MANNKNLEELIAAIGDE--------------PPLSSTP---FNPPTTVPIAAPPRTATTNSRPRVANPASQHLNGSVRGNLDELVQYLGSTPGRAVTHPLATPQPQNTQVSPFGVPTVPIMPLQARAQAHARMPNINARAADSKVSAEYMRQ-QLQA-KAIPKREPTASVGGHVRA--VTSSAAASSQSAASSARPDITAELNAVMKKTGTSTHARGASRAVPVAGIPQQRMPPGQPAPGQGRPQAAKISQEQVIVGHFCCFAIKTLNKVMEGSPLKQTAEVSLREHIKKAWAQWVRGHIPRQKLLESVARFVRDSCPQAFGIDLIREFKEWYESEFERQK 320          
The following BLAST results are available for this feature:
BLAST of Gchil7267.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IXL1_9FLOR1.880e-23948.40TAF4 domain-containing protein n=2 Tax=Gracilariop... [more]
R7Q6Z9_CHOCR2.290e-9135.70TAF4 domain-containing protein n=1 Tax=Chondrus cr... [more]
R7QKK4_CHOCR5.750e-3134.95TAF4 domain-containing protein n=1 Tax=Chondrus cr... [more]
R7Q6F3_CHOCR8.170e-2755.45Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QTB8_CHOCR5.240e-2634.90Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 719..739
NoneNo IPR availableCOILSCoilCoilcoord: 137..157
NoneNo IPR availableCOILSCoilCoilcoord: 665..685
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 690..758
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 501..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 690..793
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 461..486
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..102
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 595..642
e-value: 2.3E-5
score: 26.1
IPR007900Transcription initiation factor TFIID component TAF4, C-terminalPFAMPF05236TAF4coord: 563..855
e-value: 8.1E-17
score: 61.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:910810..913734 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7267.t1Gchil7267.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 910810..913734 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7267.t1 ID=Gchil7267.t1|Name=Gchil7267.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=865bp
METNKNLDELLAAIGDGSANAANSAARVKQAPAQTRNPTAAFPPAPQIPI
PSAPQAMSRPLSSTMNTAPSRPNVNGHYNDLLSLLQRQGTPAANQQLPRS
QNPPAARMPASARLSFVPGGRPTPSQALDPKALAALKRQHEIQAAQAKQR
RESLTNVSTINRNPPAVPVTRMNSQGFPTGIPPGVNVPTMGTSTNQESQL
NPNVSAQQRPNSAAQQGQPRSITQEQVIVGHFCRHAIKTLKKIVEGLPYA
AQVELRLREHIKAVWSQWVKGMITRPQLLQSVSNFVKQSTPNAKDVDVIR
DFKAWYEHEYELQKQRNRQPQPPKQVRHPQAPGQDVRHVNNVPAHPGSQA
VRTNLPPQSVSAARGQLKQEPQRPTIVHTAGKTIGTKPEPTIAAPGRAMI
PKNAGGRAMSGENAGGKGKSPAAYQFQAGVHAGIHPGGNVQINYAHHQLQ
PQISAKRSLDSNISSPPNAVKKAKTASKVPKAATSKKKPSLPVGIPLALK
GTRPPIQKPDQRNKGAKRPMASGALPPPGPVPISVGNPSAEIMQKKARRQ
EDLKEINLVDNVVDIEDEEVKLNVDANGKRQSVDEVVRYNPDMIVSGPIL
RMKMQSIAKSHGIHENISNEATELMSLAVRERLACILESLKTIASVRVGA
EKEQWGRVETGLDIREKLQRAREDEERTLQVAAEMRVKRRKEQKEAEAKR
FAGEAAKNDKSAKDSSAAAEAERKEKLALEKKKKESSSQRDALSGLVRDF
DRRRRRASAKPLAPLKPLGKPGLPPLAKRPSSDSLGRSGLKPLGSLDKLK
MGPLVKLGGRSNSPIPRGLGRDPVAPQVRLRVTLMDCLFLFESERNTKKS
CLLYKWYARLPCGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR007900TAF4_C