Gchil7262.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7262.t1
Unique NameGchil7262.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length240
Homology
BLAST of Gchil7262.t1 vs. uniprot
Match: A0A2V3IXJ4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXJ4_9FLOR)

HSP 1 Score: 298 bits (763), Expect = 2.320e-99
Identity = 149/235 (63.40%), Postives = 185/235 (78.72%), Query Frame = 0
Query:    1 MERVPLLDNSSENIQPAPPVHSPPVEDGQSSDTELSSESERNDHPTILDRVMGSIHTTFSYFCHKLGAYFLRFLSFAMLHCGIVCAGIFQLLAFYYTGVLNLYVLLACALYAPALIAVSIIREEIVQNGTSRSGAGPRLTHEVAIAYLLLTLFGVSSVLQPLFMHADNVISYKSMWLSLGGTAIFYYCVLISQVLYASASNVHRARLRDEQLERERANQPFWITRYESLRKKDGD 235
            MERVPL+ NSS N    P       +D   S+TE SS++ERN +P++LDR++  +H  FS  C  LG  FLR LS  MLHCGI+ AG+ Q+LAFYYTGVLN +VLLAC LYAPAL A+S+IREEIV NGTS SGAGPR+T EVA+AYL+L++ G+SSVL PLFMHA+N+ISYKSMW S+G T  +YYC+LIS+VL+ASASNV R+R R+E+LER+RANQPFWITRYE++  KD D
Sbjct:    8 MERVPLMANSSANDVVMPSTSQHAADDEPLSETEFSSQNERNTNPSLLDRILDRVHAVFSVLCRSLGYLFLRMLSIIMLHCGIIGAGVLQMLAFYYTGVLNSHVLLACLLYAPALCAISVIREEIVLNGTSHSGAGPRITQEVAVAYLILSIAGISSVLHPLFMHAENMISYKSMWTSIGATTFYYYCLLISEVLFASASNVQRSRDREEELERQRANQPFWITRYEAIHSKDND 242          
BLAST of Gchil7262.t1 vs. uniprot
Match: R7Q5F7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5F7_CHOCR)

HSP 1 Score: 194 bits (494), Expect = 8.950e-59
Identity = 107/241 (44.40%), Postives = 153/241 (63.49%), Query Frame = 0
Query:    1 MERVPLLDNSSENIQPAPPVHSPPVEDGQSSDTELSSESERNDHPT----------ILDRVMGSIHTTFSYFCHKLGAYFLRFLSFAMLHCGIVCAGIFQLLAFYYTGVLNLYVLLACALYAPALIAVSIIREEIVQNGTSRSGAGPRLTHEVAIAYLLLTLFGVSSVLQPLFMHADNVISYKSMWLSLGGTAIFYYCVLISQVLYASASNVHRARLRDEQLERERANQPFWITRYESLRK 231
            M++VP+   S  +    P   + P+         +S      DHP           I DR +  +H  FS FCH LGA+FLR LS  ML  G+V + + Q+LA+YYTGVLN +V LAC L+AP L AV++IR E+  +G SRSGAGPR++  V +AYL++T+F V+S++QP+ MH +N I  KSMW +LGG A+FYY +L+S+VLYA A N+ RA+ RD++L R   + PFW++ Y + R+
Sbjct:    1 MDKVPVPPRSPASDAVTPSAETTPL---------ISPAPPLADHPGAPDSAPSDAGIFDRFLTRVHAFFSRFCHSLGAFFLRALSTLMLLAGVVASVVVQMLAYYYTGVLNPWVFLACLLFAPTLAAVTVIRAELNFSGPSRSGAGPRMSQYVTLAYLVITVFAVASLMQPVVMHGENKIPGKSMWTALGGVALFYYSMLVSEVLYAVALNIDRAKERDDELLRRDRDDPFWLSSYNATRQ 232          
The following BLAST results are available for this feature:
BLAST of Gchil7262.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IXJ4_9FLOR2.320e-9963.40Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q5F7_CHOCR8.950e-5944.40Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 164..174
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 123..142
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 97..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..96
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 199..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..198
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..122
NoneNo IPR availableTMHMMTMhelixcoord: 99..121
NoneNo IPR availableTMHMMTMhelixcoord: 142..164
NoneNo IPR availableTMHMMTMhelixcoord: 174..196
NoneNo IPR availableTMHMMTMhelixcoord: 73..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:902497..903216 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7262.t1Gchil7262.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 902497..903216 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7262.t1 ID=Gchil7262.t1|Name=Gchil7262.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=240bp
MERVPLLDNSSENIQPAPPVHSPPVEDGQSSDTELSSESERNDHPTILDR
VMGSIHTTFSYFCHKLGAYFLRFLSFAMLHCGIVCAGIFQLLAFYYTGVL
NLYVLLACALYAPALIAVSIIREEIVQNGTSRSGAGPRLTHEVAIAYLLL
TLFGVSSVLQPLFMHADNVISYKSMWLSLGGTAIFYYCVLISQVLYASAS
NVHRARLRDEQLERERANQPFWITRYESLRKKDGDAQNV*
back to top