Gchil7259.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7259.t1
Unique NameGchil7259.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length86
Homology
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BLAST of Gchil7259.t1 vs. uniprot
Match: A0A2V3J6N5_9FLOR (Complex1_LYR_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6N5_9FLOR)

HSP 1 Score: 137 bits (344), Expect = 1.650e-40
Identity = 67/85 (78.82%), Postives = 77/85 (90.59%), Query Frame = 0 
Query:    1 MTATPSSRKVLALYRGLLRAVRFYPSKKRDSLALAIREDFREKRNITGKELEKALWLGHMELERLQKWLPTSKQMADGKDMDIKL 85
            MTA+ +S  VLALYRGLLRAVR YPSKKRDS++ AI+E+FREKR+ITG EL+KALWL +MELERLQKW+PTSKQMA GKDMDIKL
Sbjct:    1 MTASTTSTNVLALYRGLLRAVRHYPSKKRDSISQAIKEEFREKRSITGDELDKALWLANMELERLQKWIPTSKQMAQGKDMDIKL 85
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BLAST of Gchil7259.t1 vs. uniprot
Match: A0A835YDR1_9CHLO (Complex1_LYR_dom domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YDR1_9CHLO)

HSP 1 Score: 49.7 bits (117), Expect = 6.420e-6
Identity = 30/82 (36.59%), Postives = 46/82 (56.10%), Query Frame = 0 
Query:    6 SSRKVLALYRGLLRAVRFYPSKKRDSLALAIREDFREKRNITGK-ELEKALWLGHMELERLQKWLPTSKQMADGK-DMDIKL 85
            S    L LYR +L+A +F+PSKKRDS+   I+ +FR  +++     L + L L    L  L+ +LP ++  A G  D+ I L
Sbjct:    5 SPGSTLTLYRHILKAAKFFPSKKRDSIIREIKSEFRANKDLADPTRLSQCLTLAQRGLADLRSYLPEARGDAGGGGDIQISL 86
The following BLAST results are available for this feature:
BLAST of Gchil7259.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6N5_9FLOR1.650e-4078.82Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A835YDR1_9CHLO6.420e-636.59Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR protein domainPFAMPF05347Complex1_LYRcoord: 8..63
e-value: 1.3E-10
score: 41.2
NoneNo IPR availableCDDcd20251Complex1_LYR_SFcoord: 10..63
e-value: 2.60032E-11
score: 51.3918

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:897590..898034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7259.t1Gchil7259.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 897590..898034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7259.t1 ID=Gchil7259.t1|Name=Gchil7259.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=86bp
MTATPSSRKVLALYRGLLRAVRFYPSKKRDSLALAIREDFREKRNITGKE
LEKALWLGHMELERLQKWLPTSKQMADGKDMDIKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR_dom