Gchil7252.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7252.t1
Unique NameGchil7252.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1014
Homology
BLAST of Gchil7252.t1 vs. uniprot
Match: A0A2V3J418_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J418_9FLOR)

HSP 1 Score: 404 bits (1039), Expect = 5.070e-122
Identity = 205/310 (66.13%), Postives = 245/310 (79.03%), Query Frame = 0
Query:  704 NPYKSPAEPVPSSSQPPLTALFSLPFAADVR----PKPGDSPHEVAKKLYEASGHKFESCSSVFRVIRKKRRSPSAVGEEXXXDEQNIEFVTLRPQTAEVLPWKAREGSEYIDVTNGALAVKPLAAVASRFGTASLNANLRVLEPLRMPACRKDFCYISPEYPDGTSLPYVPVNNVILQHQPPHWDEEAYGINKVRLSFQKHVFEQVKEIAIRAYQDKYPGANVSCACRVTPKRVRKVVQMDADAKVDVSTFFERPMRLGIPEVLSLIELDIVGLVLLYIGVDAKNNDGSEAELAFRLHSMVMKRVVNKK 1009
            +PY+SPA     S    L  +F +P  ADV     P+  D+P EVAKKLYE   H  E+CSSVFRVIRKKRR  S+  E+   ++ ++EFVTLRPQT+EVLPWKAREGSE+IDVTNGALAVKP AA+ASR GT S +ANLRVLEP+RMPA RKDFCYISPEYPDGTSLPY+PVNNVI+QHQP +W  E YG+N V+LSF K VFE++K +AI  YQ++YPGA V+C    T KRVRK++++D+DA VDVSTFF RPMRLG+ E L +IELD+VGLVLLY+GVDAKN+DGSEAELAFRL SMVM+R   KK
Sbjct:  609 DPYRSPAGAEGPSVASRLKTIFGMPLIADVIADVIPQSEDTPAEVAKKLYEVGEHAHEACSSVFRVIRKKRRQGSSSSEDEG-EKDHVEFVTLRPQTSEVLPWKAREGSEFIDVTNGALAVKPSAAIASRLGTPSFSANLRVLEPVRMPASRKDFCYISPEYPDGTSLPYIPVNNVIMQHQPRNWSGEPYGVNNVQLSFPKLVFEKIKSLAINVYQEQYPGAAVACEGHSTLKRVRKIIEIDSDATVDVSTFFGRPMRLGVAEALGIIELDLVGLVLLYVGVDAKNHDGSEAELAFRLQSMVMRRHAKKK 917          
BLAST of Gchil7252.t1 vs. uniprot
Match: R7QG73_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG73_CHOCR)

HSP 1 Score: 70.1 bits (170), Expect = 1.180e-8
Identity = 63/239 (26.36%), Postives = 104/239 (43.51%), Query Frame = 0
Query:  789 FVTLRPQTAEVLPWKAREGSEYIDV-TNGALAVKPLAAVASRFGTASLNANLRVLEPLRMPACRKDF----CYISPEYPDGTSLPYVPVNNVILQHQPPHWDEE-----------AYGINKVRLSFQKHVFEQVKEIAIRAYQDKY-PGANVSCACRVTPKRVRKVVQMDADAKVDVSTFFERPMRLGIPEVLSLIELDIVGLVLLYIGVDAKNNDGSEAELAFRLHSMVMKRVVNKKR 1010
            + T+      + P +A E S Y+ V     LA+   A  +    TA L  N+ + EP  +P    +      Y+   YPDGTSLPY+P+ +V++Q++     +             YG + V LS  + V+E++   A +A+  ++ P    +        RV     M   AKV      +   R G+ + L L   D+ G  ++Y+     +N  SE  L FR H + M+R +   R
Sbjct:  185 YTTVFTPKIPMTPIRALETSAYLGVGPTRTLAIMSPAFASMVNDTARLEVNVVINEPF-VPVHTSELPITIMYLGFLYPDGTSLPYIPIRDVVIQYRQSVGKQSQIKNKERSCYVTYGHDFVYLSMPRPVYERLVRAARKAFHSRFHPDRKWNTEVDYDGDRVWVYAGMKPGAKVQGLADGKMGER-GVRDALRLSGTDLEGNAMMYMRFSFPHNQDSEPSLCFRFHKLSMEREIKSSR 421          
The following BLAST results are available for this feature:
BLAST of Gchil7252.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J418_9FLOR5.070e-12266.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QG73_CHOCR1.180e-826.36Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 34..54
NoneNo IPR availableCOILSCoilCoilcoord: 359..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 644..669
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 420..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 670..691
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 610..636
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 410..719
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..388
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 460..533
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..388

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:869638..872679 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7252.t1Gchil7252.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 869638..872679 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7252.t1 ID=Gchil7252.t1|Name=Gchil7252.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1014bp
MSVSTQRSTKGVLRNLNKLTDALLEENSRLQYALHQARTQIETLHVRLEL
LRRDVAARDRYDGEVRDHVAAIIGDIQSHYKPLLGNSSLFHDPKSASPVR
SALEDIHAEDEHLPSHTDTQRPSPPLSTQDHVASAEAELLPSDTDVQHPS
PSLSTHDNAAAAEVELLPSDTDVQHPSPSLSTHDNVAASEAGLLPSDTDV
QHPSPSLSTHDNVAASEAGLFPSDSNVQRSSPPLTTHENVAAAEAELLPS
DTDVQSFSPPLTTHENVAAAEAELLPSDTDVQSFSPPLATHENVAAAEAE
LLPSDTDVQRSLPPLTTRENEAAVEAELLPSDTDAQHPSPPLSNDENMVA
VDAPIPDHEDAAQQSAEQIQEQSRELTAEQTVEQAAQDNKARQTVHIVTE
RVIETRETTVLAPQDMAHNSDSEHPFEPQQAERDLHSDEGSAHELHESVP
QGHVPGEPELVRSADIEHEHLMAHVEGEPSGSEHIAERSPDEEYEPRFSE
GRPEPHEEEFQKDTESTHEEIHSEEERDQPYDGANFEGTRSIPVADTGGH
LERISDQEESEVNEEALDVSRIPAVLVPEPSEVSQEHTQLESAPLASLMD
PTLISRHQTGETEGIEHEPSADHSVQFDEGGHGEEAYEIVHATTGQVNRV
STSSRAISEESGDQNYSGDTSGHEEQDLDEHGARLEQELGKHETSPAAQI
VHTNPYKSPAEPVPSSSQPPLTALFSLPFAADVRPKPGDSPHEVAKKLYE
ASGHKFESCSSVFRVIRKKRRSPSAVGEEEEDDEQNIEFVTLRPQTAEVL
PWKAREGSEYIDVTNGALAVKPLAAVASRFGTASLNANLRVLEPLRMPAC
RKDFCYISPEYPDGTSLPYVPVNNVILQHQPPHWDEEAYGINKVRLSFQK
HVFEQVKEIAIRAYQDKYPGANVSCACRVTPKRVRKVVQMDADAKVDVST
FFERPMRLGIPEVLSLIELDIVGLVLLYIGVDAKNNDGSEAELAFRLHSM
VMKRVVNKKRPDK*
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