Gchil7206.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7206.t1
Unique NameGchil7206.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length227
Homology
BLAST of Gchil7206.t1 vs. uniprot
Match: A0A2V3IXM4_9FLOR (DNA replication complex GINS protein PSF2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXM4_9FLOR)

HSP 1 Score: 361 bits (926), Expect = 1.060e-124
Identity = 176/226 (77.88%), Postives = 199/226 (88.05%), Query Frame = 0
Query:    1 MGASTGVNATQAHESELSFQRSEFFAEDELIDINPMVRFGVVSLIRGNFGPFEPSITTTVPLWLALALKKVHRCKIIPPRWLTTRSVEKYLSDERENEDELQEIPFYFSEISSLLFHHAPDDLVNVSHLRRSVEDLANVRESKMRKWMHSNVRDRVNAIKVSNLSMHEINTHRPMLTRILNNLYDIHVTPDGRGPLSDTNSSTIPTSGTGYRSAGDRQLRRVARRD 226
            MG +    +TQAHESEL+FQRSEFFAEDELI+INPMVRFGV+S IRGNFGPFEPSITTTVPLWLALALKKVHRCKIIPPRWLT RSVE+YLS+E++NEDELQ IPFYFSEI+SLLFHHAPDDLV VS+LRR +EDL N+RESKMRKWM +NVRDR NAIKV+NLSMHEIN HRP+LTR+L N+Y+IHVT DG GPLS+TN+S+ P S +  R    RQLRRV RRD
Sbjct:    1 MGDTAAAKSTQAHESELTFQRSEFFAEDELIEINPMVRFGVISFIRGNFGPFEPSITTTVPLWLALALKKVHRCKIIPPRWLTVRSVEEYLSEEKDNEDELQSIPFYFSEIASLLFHHAPDDLVQVSNLRRLIEDLTNLRESKMRKWMQANVRDRANAIKVNNLSMHEINIHRPVLTRVLQNMYEIHVTTDGSGPLSETNTSSNPASESEPRPLPGRQLRRVIRRD 226          
BLAST of Gchil7206.t1 vs. uniprot
Match: R7QAT9_CHOCR (DNA replication complex GINS protein PSF2 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAT9_CHOCR)

HSP 1 Score: 305 bits (780), Expect = 1.720e-102
Identity = 152/219 (69.41%), Postives = 180/219 (82.19%), Query Frame = 0
Query:    9 ATQAHESELSFQRSEFFAEDELIDINPMVRFGVVSLIRGNFGPFEPSITTTVPLWLALALKKVHRCKIIPPRWLTTRSVEKYLSDERENEDELQEIPFYFSEISSLLFHHAPDDLVNVSHLRRSVEDLANVRESKMRKWMHSNVRDRVNAIKVSNLSMHEINTHRPMLTRILNNLYDIHVTPDGRGPLS--DTNSSTIPTSGTGYRSAGDRQLRRVARR 225
            AT+A E+EL+FQR+EF AEDELI+INPMV+  V++L+RG FGPFEPSITTTVPLWLALAL+KVHRCKI+PPRWLT R +++Y+S ERENE ELQ IPFYFSEI+SLL HHA DDLVN   LRR VEDL+N+R+SKMRKWM  NVRDRVNAIKV+NL++HEI+ HRP+LTR+L NLY IHV PD RG  S   TN S+  T  +  R A  RQLRRV R+
Sbjct:    6 ATEATEAELAFQRAEFLAEDELIEINPMVKSDVITLMRGEFGPFEPSITTTVPLWLALALRKVHRCKILPPRWLTVRELDRYISHERENEAELQAIPFYFSEIASLLLHHASDDLVNPGMLRRCVEDLSNIRDSKMRKWMQENVRDRVNAIKVNNLTLHEISVHRPILTRVLGNLYTIHVAPDTRGLSSTDSTNPSSDTTGASDTRPAQGRQLRRVIRK 224          
BLAST of Gchil7206.t1 vs. uniprot
Match: R7QBK6_CHOCR (DNA replication complex GINS protein PSF2, the protein is not entire n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBK6_CHOCR)

HSP 1 Score: 177 bits (450), Expect = 5.460e-54
Identity = 82/111 (73.87%), Postives = 97/111 (87.39%), Query Frame = 0
Query:   36 MVRFGVVSLIRGNFGPFEPSITTTVPLWLALALKKVHRCKIIPPRWLTTRSVEKYLSDERENEDELQEIPFYFSEISSLLFHHAPDDLVNVSHLRRSVEDLANVRESKMRK 146
            MV+  V++L+RG FGPFEPSITTTVPLWLALAL+KVHRCKI+PPRWLT R +++Y+S ERENE ELQ IPFYFS+I+SLL HHA DDLVN   LRR VEDL+N+R+SKMRK
Sbjct:    1 MVKSDVITLMRGEFGPFEPSITTTVPLWLALALRKVHRCKILPPRWLTVRELDRYISHERENEAELQAIPFYFSKIASLLLHHASDDLVNPGMLRRCVEDLSNIRDSKMRK 111          
BLAST of Gchil7206.t1 vs. uniprot
Match: A0A834WQ00_9FABA (DNA replication complex GINS protein PSF2 n=5 Tax=Caesalpinioideae TaxID=3804 RepID=A0A834WQ00_9FABA)

HSP 1 Score: 141 bits (356), Expect = 1.780e-38
Identity = 72/168 (42.86%), Postives = 107/168 (63.69%), Query Frame = 0
Query:   13 HESELSFQRSEFFAEDELIDINPMVRFGVVSLIRGNFGPFEPSITTTVPLWLALALKKVHRCKIIPPRWLTTRSVEKYLSDERENEDELQEIPFYFSEISSLLFHHAPDDLVNVSHLRRSVEDLANVRESKMRKWMHSNVRDRVNAIKVSNLSMHEINTHRPMLTRIL 180
            H S  S    EF AEDE+++I P ++   ++LI G+FGPF P ITT VPLWLA+ALKK  +C I PP W++   + + L  ERE+++  +++PF++ EIS LLF HA DD+ +V  +R  +ED+ +VR  K+   + +    R  A+K+ NLS  E+N  RP + R L
Sbjct:    8 HLSLFSADELEFIAEDEMVEIVPNLKMDALNLISGDFGPFVPQITTQVPLWLAVALKKRGKCSIRPPEWISVDKLTQVLEAERESQEMSEKLPFHYVEISRLLFDHARDDIPDVYMVRSLIEDIRDVRFHKVETDLEA-FNGRTIAVKIKNLSAMEVNIVRPFIRRAL 174          
BLAST of Gchil7206.t1 vs. uniprot
Match: A0A2R6RWY4_ACTCC (DNA replication complex GINS protein (Fragment) n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6RWY4_ACTCC)

HSP 1 Score: 138 bits (347), Expect = 2.130e-37
Identity = 70/166 (42.17%), Postives = 105/166 (63.25%), Query Frame = 0
Query:   15 SELSFQRSEFFAEDELIDINPMVRFGVVSLIRGNFGPFEPSITTTVPLWLALALKKVHRCKIIPPRWLTTRSVEKYLSDERENEDELQEIPFYFSEISSLLFHHAPDDLVNVSHLRRSVEDLANVRESKMRKWMHSNVRDRVNAIKVSNLSMHEINTHRPMLTRIL 180
            SE S    EF AEDE+I+I P +R   ++LI G+FGPF P I+T VPLWLA+ALKK  +C I PP W+    + + L  ER+++   Q +PF++ EIS LLF HA DD+ ++  +R  +ED+ +VR  K+   +   +  R  A+K+++L+  E+N  RP L + L
Sbjct:   10 SEFSAAELEFLAEDEMIEIVPNMRMESLNLISGDFGPFHPQISTQVPLWLAMALKKRGKCTIRPPEWMLVEKLMQVLEAERDSQKSFQPLPFHYVEISRLLFDHARDDIPDIYMVRSLIEDIKDVRFYKIGTGLEV-ISQRTTALKLNHLTAMEVNIVRPFLVKAL 174          
BLAST of Gchil7206.t1 vs. uniprot
Match: A0A2I0VCF8_9ASPA (DNA replication complex GINS protein PSF2 n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VCF8_9ASPA)

HSP 1 Score: 139 bits (349), Expect = 4.510e-37
Identity = 70/169 (41.42%), Postives = 106/169 (62.72%), Query Frame = 0
Query:   23 EFFAEDELIDINPMVRFGVVSLIRGNFGPFEPSITTTVPLWLALALKKVHRCKIIPPRWLTTRSVEKYLSDERENEDELQEIPFYFSEISSLLFHHAPDDLVNVSHLRRSVEDLANVRESKMRKWMHSNVRDRVNAIKVSNLSMHEINTHRPMLTRILNNLYDIHVTPD 191
            EF AEDEL++I P +R   +++I G+FGPF P I+T VP+WLA+ALKK  +C I PP W++   +   L  ERE+  E Q +PF++ E+S LLF  A DD+ ++  +R  +ED+ +VR  K+   +   +  R +A+K+ NLS  E+N  RP + R L   Y  H +P+
Sbjct:   18 EFLAEDELVEIVPNIRMDALNMICGDFGPFFPQISTKVPIWLAVALKKRGKCSIRPPEWMSVERLTHVLEAERESPREFQPLPFHYIELSKLLFEKAHDDIPDIYMVRSLIEDIRDVRFHKVEMGLEK-ISGRTHAVKLKNLSAMEVNIVRPFMVRALQAFYK-HGSPE 184          
BLAST of Gchil7206.t1 vs. uniprot
Match: A0A7S0ZFZ2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFZ2_9RHOD)

HSP 1 Score: 136 bits (343), Expect = 1.490e-36
Identity = 76/196 (38.78%), Postives = 117/196 (59.69%), Query Frame = 0
Query:   16 ELSFQRSEFFAEDELIDINPMVRFGV-VSLIRGNFGPFEPSITTTVPLWLALALKKVHRCKIIPPRWLTTRSVEKYLSDERENEDELQEIPFYFSEISSLLFHHAPDDLVNVSHLRRSVEDLANVRESKMRKWMHSNVRDR-VNAIKVSNLSMHEINTHRPMLTRILNNLYDI------HVTPDGRGPLSDTNSST 203
            E+ F   E FA++ ++ I P       + LIRG+FG FE ++   VPLW+A++LKK  +C I PP WL   ++E  L  E++++  L  IP +F EIS+L+ HHAPDDL +   +R  V D++NVR SK+R ++ SN+  R VN +K ++L++ EI   RP   ++L NL  +      + T D    LSD N+ +
Sbjct:    1 EIRFLELEHFAKEHIVTIVPNFTLSEPLHLIRGDFGNFETALPVKVPLWVAISLKKSKKCNIHPPSWLQPTALETILRQEQDDKSNLSVIPEFFFEISALMLHHAPDDLRDPKRIRFLVADISNVRASKIRSFIQSNINTRDVNIVKFNHLTLMEITKLRPTTIQVLENLQQLAPQAKLNSTQDRLDALSDRNTQS 196          
BLAST of Gchil7206.t1 vs. uniprot
Match: A0A7J7MBM9_9MAGN (DNA replication complex GINS protein PSF2 n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7MBM9_9MAGN)

HSP 1 Score: 135 bits (341), Expect = 4.030e-36
Identity = 68/174 (39.08%), Postives = 107/174 (61.49%), Query Frame = 0
Query:   13 HESELSFQRSEFFAEDELIDINPMVRFGVVSLIRGNFGPFEPSITTTVPLWLALALKKVHRCKIIPPRWLTTRSVEKYLSDERENEDELQEIPFYFSEISSLLFHHAPDDLVNVSHLRRSVEDLANVRESKMRKWMHSNVRDRVNAIKVSNLSMHEINTHRPMLTRILNNLYDI 186
            H S  S    EF AEDEL++I P +    ++   G+FGPF P + T VP+WLA+ALKK  +C I PP+W++   + + L  ER+ E   + +PF++ E+S LLF HA +D+ ++  +R  +ED+ +VR  K+   +   + +RVNA+K+ N+S  E+N  RP L R L + Y +
Sbjct:    8 HISLFSAAEIEFVAEDELVEIVPNISMEPLNFTCGDFGPFRPQMPTEVPMWLAVALKKRGKCVICPPQWMSVDKLTQVLEAERDTEYAFEPLPFHYVELSRLLFDHAHEDIPDLYMVRTLIEDIRDVRFHKLESSLKL-INERVNAVKLKNVSAMEMNIVRPFLVRTLQSFYKL 180          
BLAST of Gchil7206.t1 vs. uniprot
Match: A0A2D4C9F5_PYTIN (DNA replication complex GINS protein PSF2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9F5_PYTIN)

HSP 1 Score: 135 bits (339), Expect = 9.950e-36
Identity = 71/177 (40.11%), Postives = 109/177 (61.58%), Query Frame = 0
Query:   17 LSFQRSEFFAEDELIDINPMVRF----GVVSLIRGNFGPFEPSITTTVPLWLALALKKVHRCKIIPPRWLTTRSVEKYLSDERENEDELQEIPFYFSEISSLLFHHAPDDLVNVSHLRRSVEDLANVRESKMRKWMHSNVRD-----RVNAIKVSNLSMHEINTHRPMLTRILNNLY 184
            LS    EF AE ELIDI P        GV++ I G+FGPF+P ITT VPLWLA+ LK++++C+II P W +   + + L  E+++ D  +E+PF++ EI+SLLF HA +D+  + H+R  +ED+ NVR+ K+R  ++    D        AI+++N+   E+N+ R  +   LN  Y
Sbjct:    9 LSASEIEFLAEQELIDIIPHFGIRENDGVLNFISGDFGPFQPGITTRVPLWLAIMLKQLNKCRIIEPSWFSVDYLSQRLEREKDS-DVFEELPFHYLEIASLLFKHAAEDIEQIEHIRSLLEDIQNVRQDKIRNGLYKIANDVQSGGTAYAIQMNNIGALEVNSVRQFMIGSLNKFY 184          
BLAST of Gchil7206.t1 vs. uniprot
Match: A0A834LEV5_RHOSS (DNA replication complex GINS protein PSF2 n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LEV5_RHOSS)

HSP 1 Score: 134 bits (338), Expect = 2.770e-35
Identity = 72/186 (38.71%), Postives = 107/186 (57.53%), Query Frame = 0
Query:   13 HESELSFQRSEFFAEDELIDINPMVRFGVVSLIRGNFGPFEPSITTTVPLWLALALKKVHRCKIIPPRWLTTRSVEKYLSDERENEDELQEIPFYFSEISSLLFHHAPDDLVNVSHLRRSVEDLANVRESKMRKWMHSNVRDRVNAIKVSNLSMHEINTHRPMLTRILNNLY-----DIHVTPDGR 193
            H S+ S    EF AEDE I+I P +R   + L  G FGPF P ITT VP+WLA+A+KK  +C I PP W++   + + L  ER+++   Q +PF++ E S LLF HA DD+ ++  +R  +ED+ +VR  K+   +   +  R  A+K+ +L+  E+N  RP + R L   Y     +I   PD R
Sbjct:    8 HGSDFSAAELEFLAEDETIEIVPNMRMDALDLTCGIFGPFYPQITTQVPMWLAVAMKKRGKCTIRPPEWMSVEKLTQVLEAERDSQKSFQPLPFHYVETSRLLFDHARDDIPDIYMVRSLIEDIKDVRFHKIGTGLEV-ISQRTAALKLEHLTAMEVNIVRPFVVRALQTFYKLDNPEITQEPDAR 192          
The following BLAST results are available for this feature:
BLAST of Gchil7206.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXM4_9FLOR1.060e-12477.88DNA replication complex GINS protein PSF2 n=1 Tax=... [more]
R7QAT9_CHOCR1.720e-10269.41DNA replication complex GINS protein PSF2 n=1 Tax=... [more]
R7QBK6_CHOCR5.460e-5473.87DNA replication complex GINS protein PSF2, the pro... [more]
A0A834WQ00_9FABA1.780e-3842.86DNA replication complex GINS protein PSF2 n=5 Tax=... [more]
A0A2R6RWY4_ACTCC2.130e-3742.17DNA replication complex GINS protein (Fragment) n=... [more]
A0A2I0VCF8_9ASPA4.510e-3741.42DNA replication complex GINS protein PSF2 n=2 Tax=... [more]
A0A7S0ZFZ2_9RHOD1.490e-3638.78Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7J7MBM9_9MAGN4.030e-3639.08DNA replication complex GINS protein PSF2 n=1 Tax=... [more]
A0A2D4C9F5_PYTIN9.950e-3640.11DNA replication complex GINS protein PSF2 n=1 Tax=... [more]
A0A834LEV5_RHOSS2.770e-3538.71DNA replication complex GINS protein PSF2 n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.5.50coord: 18..82
e-value: 9.5E-24
score: 85.3
NoneNo IPR availableGENE3D1.20.58.1020coord: 85..193
e-value: 2.5E-26
score: 93.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..226
NoneNo IPR availableCDDcd11712GINS_A_psf2coord: 72..187
e-value: 3.97622E-32
score: 111.547
NoneNo IPR availableSUPERFAMILY160059PriA/YqbF domaincoord: 18..76
IPR007257DNA replication complex GINS protein Psf2PIRSFPIRSF028998GINS_PSF2coord: 7..218
e-value: 6.9E-53
score: 177.0
IPR007257DNA replication complex GINS protein Psf2PANTHERPTHR12772DNA REPLICATION COMPLEX GINS PROTEIN PSF2coord: 15..188
IPR021151GINS subunit, domain APFAMPF05916Sld5coord: 59..168
e-value: 2.8E-17
score: 63.1
IPR036224GINS, helical bundle-like domain superfamilySUPERFAMILY158573GINS helical bundle-likecoord: 78..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:532764..533634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7206.t1Gchil7206.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 532764..533634 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7206.t1 ID=Gchil7206.t1|Name=Gchil7206.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=227bp
MGASTGVNATQAHESELSFQRSEFFAEDELIDINPMVRFGVVSLIRGNFG
PFEPSITTTVPLWLALALKKVHRCKIIPPRWLTTRSVEKYLSDERENEDE
LQEIPFYFSEISSLLFHHAPDDLVNVSHLRRSVEDLANVRESKMRKWMHS
NVRDRVNAIKVSNLSMHEINTHRPMLTRILNNLYDIHVTPDGRGPLSDTN
SSTIPTSGTGYRSAGDRQLRRVARRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007257GINS_Psf2
IPR021151GINS_A
IPR036224GINS_bundle-like_dom_sf