Gchil7189.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7189.t1
Unique NameGchil7189.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length848
Homology
BLAST of Gchil7189.t1 vs. uniprot
Match: A0A2V3INB7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INB7_9FLOR)

HSP 1 Score: 399 bits (1024), Expect = 7.420e-128
Identity = 205/369 (55.56%), Postives = 256/369 (69.38%), Query Frame = 0
Query:  463 YGYDSEVLDAIHKFHFAIEDLPEDHKEHESPGTDSGRAMLLSKIFTSRFVSFAEWDYDDVCYFLFGTYPRPMFRRCCQSEGGSEFMNLVYNSWKPSFELLAFAMWEYSGRESVLFGHWLYLLPDEQRPANKEMGKVLFSTMVQSNTLTERDCASVVGAILMYPLESMYAREHEATIDEYSMWLEPYEIGLLCRSLLLHRAVERSLCKCKYRNIDNELGQXXXXXRNSEVDW-RAVKLSNDLDKEYATVIFQLILERHHPDAVAFDRRWTQEKSDDFLRSACEYVFCKEVYNEIYQNLHSGNEPRVAQRNPRPLTEVEIRTNIARTADRDYHPSFANHNGCVEGHNKGFPEHTTAQDQDSALLCRMNHTR 830
            +GY    LD I  F FA+++L +D K  E+P TD GR  +L  I  +  +SF +WDY D+C FL  TYPR +FR   +  GGS F+N+V+++W+P F+L AFA+WEY  R++ LFG WL+LLP++Q+P+ +E+GKVLFS MV S T+ E+DC S+ GA++ YPLESM+AREHEA ID+ S  LE YE+GLLCRSL LHRA+ERSLC C           XXXXX     D  R +KLSNDLDKEYATVIF+LILERH  DAV   RRW Q + D F+ SA +YVFCKEVY EIYQNLH G +P +AQ+N RPLTEVEIRTNIAR+AD DY  S A+H GCV    +  P+   A  QD A  C   H R
Sbjct:    4 FGYSQTTLDCIRTFQFALQELRDDQKTPENPLTDYGRTRILQLILDTCRISFKDWDYVDICVFLLCTYPREIFREAVRHCGGSHFVNIVFSNWRPPFKLYAFAIWEYVKRDADLFGDWLFLLPNDQKPSKRELGKVLFSDMVVSGTVAEKDCPSIAGALVPYPLESMFAREHEAEIDQLSRGLEAYEVGLLCRSLFLHRAIERSLCTCXXXXXXXXXXXXXXXXXXXXXDEKRMIKLSNDLDKEYATVIFRLILERHDRDAVDHTRRWNQHERDSFVSSASDYVFCKEVYTEIYQNLHVGKKPTMAQQNARPLTEVEIRTNIARSADGDYDFSIAHHGGCVV---RACPQ---AMKQDCANACCRTHCR 366          
BLAST of Gchil7189.t1 vs. uniprot
Match: A0A2V3INA8_9FLOR (RNase NYN domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INA8_9FLOR)

HSP 1 Score: 306 bits (784), Expect = 5.910e-92
Identity = 180/387 (46.51%), Postives = 249/387 (64.34%), Query Frame = 0
Query:   11 PPSSLWLRFTGYDAPHFELANIVIEFCRSSRREFSPLVRAIAPMQFSSPIDCKLARHGSHSFALYVLKPRSVSITNSPAALFRFSVDAAAIFCQLQKTNTEPQQSHHSLTLCLSTAD--GLRLSYEASLHPPLYTSTEQASVLPALEQDVLSVS---APHKLRSPRPLDLSFSSVSDDGDSAEDSPRASHALSPNRCKLQSKLRFSDTLQFIPTTQQLKHDADLATAERAILSRGLGDLAAQLARLQHQLRQVNQSVQISHLPVAPHPSVPRAVNHPLQLPVASAKRKRVVLDGHSVARSYGRGKFRPQGIPVALRYYHARGFNAVAVVSKRALEFESSSRDSSRD-ALAQLIDSGLVAVTTPHSRREEFILNYALDHNAMLTTIET 391
            P   LW+ FTGY AP+F   N+VI+F R+SRREFS +V A  P  FSSPIDCKL  +  ++F LY L P + ++T +   L RFS+D  AI  +L+    +P        +CLS     G+++ YEAS  PPL+ + +++SVL +++ D  S+    A     S   LD SFSSVS++ D+ + SP ++H+      K + K+RF+D L  IPTTQQLK D D A  ERA LS  L DL+ Q++RLQ +LR V +S+ +++   +P  S  + VNH      + AKR+RVVLD HSVA +YG G+FRPQGI VAL+YYH R  +AVA+ SKRA++   SS  SSRD AL QLI +GL+AVT  HSRR++FI+ Y+LDHNA + + E+
Sbjct:   14 PAPQLWISFTGYTAPNFTPRNVVIQFMRASRREFSHVVTASTPCHFSSPIDCKLPLNAQNAFVLYALNPDATTLTEAATVLLRFSLDTTAIHKRLEAAVQQP--------ICLSKTSPTGVQIKYEASTAPPLHLALDESSVLSSIQDDTPSIPTTLAKALTSSSSALDSSFSSVSEEEDAIDHSP-STHS------KRKPKVRFTDKLHLIPTTQQLKSDLDNAAIERAQLSNSLTDLSVQVSRLQRELRHVKKSLNLANHS-SPCTSFVQPVNHLSMSSSSCAKRQRVVLDAHSVACAYGNGQFRPQGIAVALQYYHNRDIHAVAIASKRAIDTALSSGKSSRDSALQQLIHTGLLAVTNSHSRRQDFIIRYSLDHNAYIVSNES 384          
The following BLAST results are available for this feature:
BLAST of Gchil7189.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3INB7_9FLOR7.420e-12855.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3INA8_9FLOR5.910e-9246.51RNase NYN domain-containing protein n=1 Tax=Gracil... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 241..261
NoneNo IPR availableGENE3D3.40.50.11980coord: 292..391
e-value: 1.8E-12
score: 49.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..198
IPR021869Ribonuclease Zc3h12a-like, NYN domainPFAMPF11977RNase_Zc3h12acoord: 292..387
e-value: 5.2E-7
score: 29.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:463546..468391 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7189.t1Gchil7189.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 463546..468391 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7189.t1 ID=Gchil7189.t1|Name=Gchil7189.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=848bp
MTDSPSVAGVPPSSLWLRFTGYDAPHFELANIVIEFCRSSRREFSPLVRA
IAPMQFSSPIDCKLARHGSHSFALYVLKPRSVSITNSPAALFRFSVDAAA
IFCQLQKTNTEPQQSHHSLTLCLSTADGLRLSYEASLHPPLYTSTEQASV
LPALEQDVLSVSAPHKLRSPRPLDLSFSSVSDDGDSAEDSPRASHALSPN
RCKLQSKLRFSDTLQFIPTTQQLKHDADLATAERAILSRGLGDLAAQLAR
LQHQLRQVNQSVQISHLPVAPHPSVPRAVNHPLQLPVASAKRKRVVLDGH
SVARSYGRGKFRPQGIPVALRYYHARGFNAVAVVSKRALEFESSSRDSSR
DALAQLIDSGLVAVTTPHSRREEFILNYALDHNAMLTTIETRGLGEREKG
CGIPCAVLNDGHGFERADCNFIEDSACAAVNKSLDTAYRTHLQLKLEKTA
FVFNPALTMSLPYGYDSEVLDAIHKFHFAIEDLPEDHKEHESPGTDSGRA
MLLSKIFTSRFVSFAEWDYDDVCYFLFGTYPRPMFRRCCQSEGGSEFMNL
VYNSWKPSFELLAFAMWEYSGRESVLFGHWLYLLPDEQRPANKEMGKVLF
STMVQSNTLTERDCASVVGAILMYPLESMYAREHEATIDEYSMWLEPYEI
GLLCRSLLLHRAVERSLCKCKYRNIDNELGQCQCKNRNSEVDWRAVKLSN
DLDKEYATVIFQLILERHHPDAVAFDRRWTQEKSDDFLRSACEYVFCKEV
YNEIYQNLHSGNEPRVAQRNPRPLTEVEIRTNIARTADRDYHPSFANHNG
CVEGHNKGFPEHTTAQDQDSALLCRMNHTRQDDVQFRMSILYDYWRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021869RNase_Zc3h12_NYN