Gchil7150.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7150.t1
Unique NameGchil7150.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length305
Homology
BLAST of Gchil7150.t1 vs. uniprot
Match: A0A2V3INB9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INB9_9FLOR)

HSP 1 Score: 367 bits (941), Expect = 3.720e-124
Identity = 180/249 (72.29%), Postives = 210/249 (84.34%), Query Frame = 0
Query:   55 RLCPSAKKKSSTGPVVKIVGFLLIGGLLFSAAQPLIRA---GKTSDALLDAKLGKIPVFTVTDSTGRPFLSEADDGRLRRGFFFIQPADAEKYLEKVLEQSEDAKVLAIGLNEAIKFLDTPARPAKSVPETFELFPDDHEAALADELTQGAFQRSFGENGVPVFYLDGLAIKDDLQGAPVYPLFFAKEKLDETLNELKKKDPSAVLDISDLQIVDLKQTIKEIRSNSNSKLSRVIFIPLDDSMKRLRAS 300
            R+CP+A+  SST P VK++G LLIGG+LFS  QPL+ A    K+ D LLDAKL KIPVFTVTDSTGRPFLSE DDGRLRRG+FF+QPADAEKYLE+V EQ+EDAKVLAIGLNEAIKFLDT    AKSVPE FE+FPDDHEAALA ++T G FQ+SFGENGVP+FY+DGLA+KD     PVYPLFF KE LDET+ +LKKKDPSA LD+ DL+I+DLKQTIKEIR+ SN KLSRV+F+PL+DS+ RLR +
Sbjct:   75 RICPTARGSSSTSPAVKLIGALLIGGILFSTVQPLVTAVGGNKSVDTLLDAKLRKIPVFTVTDSTGRPFLSETDDGRLRRGYFFVQPADAEKYLEQVKEQNEDAKVLAIGLNEAIKFLDTRIGSAKSVPEKFEIFPDDHEAALAKDITNGDFQKSFGENGVPIFYIDGLAVKDSKDDPPVYPLFFEKETLDETIKDLKKKDPSAALDLKDLRIIDLKQTIKEIRAGSNPKLSRVVFVPLNDSLNRLRTT 323          
BLAST of Gchil7150.t1 vs. uniprot
Match: R7Q256_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q256_CHOCR)

HSP 1 Score: 255 bits (652), Expect = 1.860e-80
Identity = 120/223 (53.81%), Postives = 166/223 (74.44%), Query Frame = 0
Query:   70 VKIVGFLLIGGLLFSAAQPLIRAGKTS-----DALLDAKLGKIPVFTVTDSTGRPFLSEADDGRLRRGFFFIQPADAEKYLEKVLEQSEDAKVLAIGLNEAIKFLDTPARPAKSVPETFELFPDDHEAALADELTQGAFQRSFGENGVPVFYLDGLAIKDDLQGAPVYPLFFAKEKLDETLNELKKKDPSAVLDISDLQIVDLKQTIKEIRSNSNSKLSRVIF 287
            +KI   L++ G + +A  P     K +     D ++D +L K+PVFTVTD++GRPFLSE +D R R G+FFIQPADAE +L +V  ++ DAKVL +GLNEA+K+LD+  R +KS+PETF LFPD+HE+ +A ++T GAFQR+FG +GVP+FY+DGLA+K+D +G  + PLFF KEKLDETL  LKK+ P  V+++ DLQ++DL QTIKEIR+  N K +R+ F
Sbjct:   68 IKIGALLVVAGFIITAFLPAAGVIKNALTDNGDNVVDYQLSKVPVFTVTDASGRPFLSETEDHRSRLGYFFIQPADAELFLNRVKNENADAKVLTVGLNEAVKYLDSKPRSSKSIPETFSLFPDEHESQIAQDITDGAFQRNFGPSGVPIFYVDGLALKEDKEGQAIIPLFFEKEKLDETLETLKKQSPEIVIEMKDLQVIDLNQTIKEIRTGGNPKFNRIAF 290          
BLAST of Gchil7150.t1 vs. uniprot
Match: A0A5J4Z0H6_PORPP (Protein TIC 22, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0H6_PORPP)

HSP 1 Score: 130 bits (328), Expect = 3.150e-32
Identity = 93/280 (33.21%), Postives = 149/280 (53.21%), Query Frame = 0
Query:   26 KHNGLKIRPRRACSISVPLHFETTHKSSVRLCPSAKKKSSTGPVVKIVGFLL--IGGLLFSAAQPLIRAGKTSDALLDAKLGKIPVFTVTDSTGRPFLSEADDGRLRRGFFFIQPADAEKYLEKVLEQSE-DAKVLAIGLNEAIKFLDTPARPAKSVPETFELFPDDHEAALADELTQGAFQRSFGENGVPVFYLDGLAIKDDLQGAPVYPLFFAKEKLDETLNELKKKDP--SAVLDISDLQIVDLKQTIKEIRSNSNSKL-SRVIFIPLDDSMKRLRA 299
            K   ++ RP R   IS PL  +           SA    + G V  +  F+   +  L F+A      +   S A +  +L  +PVF+VTD+ G+P+L+E    + R G F++ P++AE  +  V  Q E DA+VL + L++A+KF   P R  +S  + F+L     E  LA ++T  A   +FGE+ VP+FYL+GLA K +  GA V+PLFF  E+L+  + +L+K+       L+ S++ IVDL   + E+ S     + + V+F+P  D M  ++A
Sbjct:   45 KMRQMQHRPAR---ISTPLQMQRGDDEDSS--SSAVSWKTVGAVFALTAFVFSSLAPLYFAATS---GSASVSKAEIAERLHAVPVFSVTDTQGKPYLAELTS-KERLGLFYLDPSEAEAQMRYVQSQGETDARVLPVALDDALKFTARPPRADESSKDVFKLKAKARELQLAQQMTGKA--ETFGEDSVPLFYLEGLAFKRN--GARVFPLFFNYEELNAYVQQLRKQGTVDEKTLEASNVNIVDLNMVLSELASPRRDPIWNEVVFLPPQDGMNFMKA 311          
BLAST of Gchil7150.t1 vs. uniprot
Match: A0A7S1EUH9_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EUH9_9RHOD)

HSP 1 Score: 114 bits (284), Expect = 8.410e-26
Identity = 86/262 (32.82%), Postives = 143/262 (54.58%), Query Frame = 0
Query:   53 SVRLCPSAKKKSSTGPVVKIVGFLLIGGL-LFSAAQPLIRAGKTSDALLDA-----KLGKIPVFTVTDSTGRPFLS---EADDGRLRRGFFFIQPADAEKYLEKVLEQS-EDAKVLAIGLNEAIKFLDTP-ARPAKSVPETFELFPDDHEAALADELTQGAFQRSFGENGVPVFYLDGLAIKDDLQGAPVYPLFFAKEKLDETLNELKKKDPS--AVLDISDLQIVDLKQTIKEIRS--NSNSKLSRVIFIPLDDSMKRLRA 299
            S+ +  S+   S   P  K +G +   GL L S+  PL+ A +   + L       +L KIPVF+VTDS G+PFL+   E+    +R G F++ PA+AE+ L  + +Q  EDA+VL + L EA+ F++ P    A    + F + P   E   A  L      R F + GVP+FY+DGLAI  +     +YP+FF  E+L++ +++LK  DP     L+   + I+ L   ++E+R+  + NS + ++I  P ++ ++ L++
Sbjct:   67 SILMSGSSPGGSGESPNRKNLGAIFALGLFLVSSILPLVGAIRGGSSALQPQEISQRLDKIPVFSVTDSEGKPFLTDYAESSGSTVREGLFYLDPAEAEQQLVLIKKQGYEDARVLPVSLKEALNFVEHPIVDKATKKADEFRIQPKQLEIDAASTL----LGRQFSD-GVPLFYMDGLAINRN--NDQIYPVFFNYEELEKFVSKLKD-DPKNKEFLEKQTVNIIGLNAVLREMRAAPSGNSAIRQMILYPPEEGIQYLKS 320          
BLAST of Gchil7150.t1 vs. uniprot
Match: L1K3Z1_GUITC (Member of Tic22 family n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K3Z1_GUITC)

HSP 1 Score: 93.2 bits (230), Expect = 3.940e-18
Identity = 84/302 (27.81%), Postives = 135/302 (44.70%), Query Frame = 0
Query:   20 KACHPVKHNGLK---IRPRRACSISVPLHFETTHKSSVRLCPSAKKKSSTGPVVKIVGFLLIGGLLFSAAQPLIRAGKTSDAL---------------LDAKLGKIPVFTVTDSTGRPFLSEADDGRLRRGFFFIQPADAEKYLEKVLE---QSEDAKVLAIGLNEAIKFLDTPARPAKSVPETFELFPDDHEAALADELTQGA-FQRSFGENGV----PVFYLDGLAIKDDLQGAPVYPLFFAKEKLDETLNELKKKDPSAVLDISDLQIVDLKQTIKEIRSNSNSKLSRVIFIPLDDSMK 295
            KA HP  H  L+   I P++    S       +  +  R   S++K    G  VKI+  +L  G +F    PLI  G     L               +D KL ++P F VTD  G P+++E       RG+FF+ P DAEK+ ++V E   Q     V    L+EAIK++ + A       + FE+ P   E  +A  +         +G  GV    PV+ ++GL ++ D +   + PLFF K   +    +  K           LQ++DL   IK++R   +++  +V+F P  D+++
Sbjct:   25 KAIHPRPHGSLRHSSIGPQQG---SPGPRRSASPNNGARGLQSSEK----GGAVKILIPILGVGFVFGGLFPLINNGLNYAKLDSSISGAATGLKQKEIDEKLKRVPAFAVTDDQGTPYVAEYQGKN--RGYFFLNPKDAEKFRDRVKELQTQGSSVSVRTTTLDEAIKYIKSKANS-----DPFEILPYGEEIEIARGIKNPENCDICWGAEGVKEKIPVYLVEGLGLQKDSK--VITPLFFDKAGAESFYRQASKTGEPK------LQVLDLSALIKKMRKGGSTEFRKVVFFPNKDAIE 304          
BLAST of Gchil7150.t1 vs. uniprot
Match: A0A7S1HK72_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HK72_HEMAN)

HSP 1 Score: 92.0 bits (227), Expect = 1.340e-17
Identity = 67/212 (31.60%), Postives = 104/212 (49.06%), Query Frame = 0
Query:   92 AGKTSDALLDAKLGKIPVFTVTDSTGRPFLSEADDGRLRRGFFFIQPADAEKYLEKVLE---QSEDAKVLAIGLNEAIKFLDTPARPAKSVPETFELFP-----DDHEAALADELTQGAFQRSFGENGVPVFYLDGLAIKDDLQGAPVYPLFFAKEKLDETLNELKKKDPSAVLDISDLQIVDLKQTIKEIRSNSNSKLSRVIFIPLDDSMK 295
            A K   + +D +L  +PVF+VTD+ G P+++E  DG   +GFFF+ P+DA+ Y  K+ E    S   K+    L+  I ++       K     FE+FP      D  A  A +     +     +  VPVF++ GLA++ D Q   V P+FF KE       +L K +        DL+  DL   IK+IR   +S+  +V F P  +S++
Sbjct:  127 ATKMKQSEIDDRLRSVPVFSVTDAKGTPYIAETKDGE-SKGFFFLDPSDAKAYQAKIKELQGPSATVKITPTTLDRGIAYIK-----GKKSETPFEIFPASGAVKDARAIKAPDTCDICWGAEGVQEYVPVFWVRGLALETDNQ--LVTPVFFDKEMALGYYGQLGKAEAP------DLECFDLSALIKKIRKGGSSEFRKVSFYPSKNSVE 324          
BLAST of Gchil7150.t1 vs. uniprot
Match: A0A7S3A535_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A535_9RHOD)

HSP 1 Score: 75.5 bits (184), Expect = 6.500e-12
Identity = 54/172 (31.40%), Postives = 90/172 (52.33%), Query Frame = 0
Query:   95 TSDALLDAKLGKIPVFTVTDSTGRPFLSEADDGRL--RRGFFFIQPADAEKYLEKVLEQSED----AKVLAIGLNEAIKFLDTPARPA-------KSVPETFELFPDDHEAALADELTQGAFQRSFGENGVPVFYLDGLAIKDDLQGAPVYPLFFAKEKLDETLNELKKKDP 253
            T +++L+ KL  +PVF +TD  GRPFL+E D+ +   +   FF    DAE+ L+K+ ++S+D    A++  + ++EA K     A P+       + +   F  + D  E   A+ + +           VPVF  +GL I+   Q   V PL+F+KE LD+T   +++K P
Sbjct:   99 TKNSVLE-KLRNVPVFAITDRDGRPFLAEVDNVQEGEQASVFFFSYEDAEQVLDKLKKKSQDMTKNAEINVLTMDEAYKKAKGKALPSGIMNKRGREILVVFRFYADTREVREAERILKRDGIPKDQVPQVPVFLAEGLTIRLGKQF--VVPLYFSKEDLDKTWQNVREKTP 267          
BLAST of Gchil7150.t1 vs. uniprot
Match: A0A5J4Z0X3_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0X3_PORPP)

HSP 1 Score: 66.6 bits (161), Expect = 3.380e-10
Identity = 41/109 (37.61%), Postives = 66/109 (60.55%), Query Frame = 0
Query:  194 LADELTQGAFQRSFGENGVPVFYLDGLAIKDDLQGAPVYPLFFAKEKLDETLNELKKKDP--SAVLDISDLQIVDLKQTIKEIRSNSNSKL-SRVIFIPLDDSMKRLRA 299
            LA ++T  A   +FGE+ VP+FYL+GLA K +  GA V+PLFF  E+L+  + +L+K+       L+ S++ IVDL   + E+ S     + + V+F+P  D M  ++A
Sbjct:   10 LAQQMTGKA--EAFGEDSVPLFYLEGLAFKRN--GARVFPLFFNYEELNAYVQQLRKQGTVDEKTLEASNVNIVDLNMVLSELASPRRDPIWNEVVFLPPQDGMNFVKA 114          
BLAST of Gchil7150.t1 vs. uniprot
Match: A0A7S0I601_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I601_9EUKA)

HSP 1 Score: 66.6 bits (161), Expect = 8.220e-9
Identity = 60/186 (32.26%), Postives = 86/186 (46.24%), Query Frame = 0
Query:   80 GLLFSAAQPLIRAG--KTSDALLDAKLGKIPVFTVTDSTGRPFLSEADDGRLRRGFFFIQPADAEKYLEKVLEQ----SEDAKVLAIGLNEAIKFLDTPAR------PA--KSVPETFELFPDDHEAALADELTQGAFQRSFGENGVP---VFYLDGLAIKDDLQGAPVYPLFFAKEKLDETLNEL 248
            G   + A P+I  G  K +   L AKLGK+PVF VT+  G PFL++   G  +    F+ P+DA+K L+ VL+     S  AKVL   L+ A+K    P        PA  + +  +++  P   E   A    Q A  +S     VP    +   GL  K    G  V P+F +K+  D  L +L
Sbjct:   96 GARSAIAAPVISTGARKKAKLALKAKLGKVPVFMVTNGGGSPFLNKLSSGD-QSAVMFLFPSDAQKMLKAVLKAPNGASSGAKVLPSNLDRALKLAMLPPSNSGLRDPASGRDLSMSWQFMPHAAEMRSA----QAAMLKSAKAPTVPKVPAYTASGLFFKK--HGREVQPIFLSKKDADAALEQL 274          
BLAST of Gchil7150.t1 vs. uniprot
Match: A9BLA6_HEMAN (Tic22 n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BLA6_HEMAN)

HSP 1 Score: 62.4 bits (150), Expect = 1.900e-7
Identity = 47/161 (29.19%), Postives = 85/161 (52.80%), Query Frame = 0
Query:  103 KLGKIPVFTVTDSTGRPFLSEADDGRLRRGFFF--IQPADAEKYLEKVLEQSEDAKVLAIGLNEAIKFLDTPARPA-------KSVPETFELFPDDHEAALADELTQGAFQRSFGENGVPVFYLDGLAIKDDLQGAP-VYPLFFAKEKLDETLNELKKKDP 253
            K+  +PVF+VT+  G+PFL +   G      FF  I+  +  K LEK   Q+ + ++  +GL++AIK +   A  +       + +   F+L PD+ +   A  LT+    +    N +P+F + GL+I   ++G   + P+FF KE L+ T ++++  +P
Sbjct:  106 KIKTVPVFSVTNRFGQPFLIQNKHGEQVALMFFSHIEALEFGKELEKS-HQATNPRIFIMGLDKAIKMISHGATSSGIKDQYGQDIKMRFQLIPDEKQLDHALNLTKIRGSQQSPPN-IPIFSIPGLSI---IKGKEKISPMFFTKEDLEITWDKIRSINP 261          
The following BLAST results are available for this feature:
BLAST of Gchil7150.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2V3INB9_9FLOR3.720e-12472.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q256_CHOCR1.860e-8053.81Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z0H6_PORPP3.150e-3233.21Protein TIC 22, chloroplastic n=1 Tax=Porphyridium... [more]
A0A7S1EUH9_9RHOD8.410e-2632.82Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
L1K3Z1_GUITC3.940e-1827.81Member of Tic22 family n=2 Tax=Guillardia theta Ta... [more]
A0A7S1HK72_HEMAN1.340e-1731.60Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S3A535_9RHOD6.500e-1231.40Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z0X3_PORPP3.380e-1037.61Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S0I601_9EUKA8.220e-932.26Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A9BLA6_HEMAN1.900e-729.19Tic22 n=1 Tax=Hemiselmis andersenii TaxID=464988 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1350.100coord: 99..202
e-value: 9.4E-15
score: 56.8
NoneNo IPR availableGENE3D3.40.1350.100coord: 203..282
e-value: 3.4E-11
score: 44.9
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 91..304
IPR007378Tic22-likePFAMPF04278Tic22coord: 100..290
e-value: 8.5E-20
score: 71.1
IPR007378Tic22-likePANTHERPTHR33926PROTEIN TIC 22, CHLOROPLASTICcoord: 97..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:367612..368526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7150.t1Gchil7150.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 367612..368526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7150.t1 ID=Gchil7150.t1|Name=Gchil7150.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=305bp
MSFVSAASPLGFYRGHCLTKACHPVKHNGLKIRPRRACSISVPLHFETTH
KSSVRLCPSAKKKSSTGPVVKIVGFLLIGGLLFSAAQPLIRAGKTSDALL
DAKLGKIPVFTVTDSTGRPFLSEADDGRLRRGFFFIQPADAEKYLEKVLE
QSEDAKVLAIGLNEAIKFLDTPARPAKSVPETFELFPDDHEAALADELTQ
GAFQRSFGENGVPVFYLDGLAIKDDLQGAPVYPLFFAKEKLDETLNELKK
KDPSAVLDISDLQIVDLKQTIKEIRSNSNSKLSRVIFIPLDDSMKRLRAS
TTPI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007378Tic22-like