Gchil7134.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7134.t1
Unique NameGchil7134.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length253
Homology
BLAST of Gchil7134.t1 vs. uniprot
Match: A0A2V3IP47_9FLOR (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP47_9FLOR)

HSP 1 Score: 423 bits (1088), Expect = 1.570e-148
Identity = 211/252 (83.73%), Postives = 225/252 (89.29%), Query Frame = 0
Query:    1 MLSLRRAASTFFPSASRVTHRLFCAPADGAASNPATNAQLEQQKAFLASVVETLPNSITAARIQAGNAPGGGEMVLEVPHSMTVRVLRFLKLHSSSQFKGFVQCTAVDYPERKDRFRVVYSLLSTRFNARIRVQTYVDEVTPVESATTVFKGADWFEREVWDMYGVFFHSHPDLRRILTDYGFEGHPQRKDFPLSGYVEVRYDDAEKRVVQEPVEIAQEYRSFDYSTPWEVFPEGKRPKDAVQLEQADKKPE 252
            M+S+RR  S    SA R ++R  C   D  ++ P +N QLEQQKAFLASVVETLPN+ITAARIQ GNAP GGEMVLEVP ++TV VLRFLKLHSSSQFK F+Q TAVDYPE K+RFRVVYSLLSTRFNARIRVQTYVDEVTPVESAT VFKGADWFEREVWDMYGVFFHSHPDLRRILTDYGFEGHPQRKDFPLSGYVEVRYDDAEKRVVQEPVEIAQEYRSFDYSTPWEVFPEG RPKDAVQLEQ++KKPE
Sbjct:    1 MMSVRRVMSRLLLSAPRTSYRALCTATDTTSAKPVSNPQLEQQKAFLASVVETLPNAITAARIQGGNAPSGGEMVLEVPSNVTVPVLRFLKLHSSSQFKCFIQATAVDYPELKERFRVVYSLLSTRFNARIRVQTYVDEVTPVESATKVFKGADWFEREVWDMYGVFFHSHPDLRRILTDYGFEGHPQRKDFPLSGYVEVRYDDAEKRVVQEPVEIAQEYRSFDYSTPWEVFPEGTRPKDAVQLEQSEKKPE 252          
BLAST of Gchil7134.t1 vs. uniprot
Match: R7QLG9_CHOCR (Complex1_30kDa domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLG9_CHOCR)

HSP 1 Score: 404 bits (1039), Expect = 4.590e-141
Identity = 195/251 (77.69%), Postives = 220/251 (87.65%), Query Frame = 0
Query:    1 MLSLRRAASTFFPSASRVTHRLFCAPADGAASNPATNAQLEQQKAFLASVVETLPNSITAARIQAGNAPGGGEMVLEVPHSMTVRVLRFLKLHSSSQFKGFVQCTAVDYPERKDRFRVVYSLLSTRFNARIRVQTYVDEVTPVESATTVFKGADWFEREVWDMYGVFFHSHPDLRRILTDYGFEGHPQRKDFPLSGYVEVRYDDAEKRVVQEPVEIAQEYRSFDYSTPWEVFPEGKRPKDAVQLEQADKKP 251
            M+++RR A+      S    R  CA    A SNP ++  L+QQK+F+AS+VE LPNS+TAARIQ+GN+P G EMVLEVP+ MT+RVLRFLKLHSSSQFKGF+Q TAVDYPERKDRFRVVYSLLSTRFNARIRVQTYVDE+TP+ESAT +FKGADWFEREVWDMYGVFFHSHPD+RRILTDYGFEGHPQRKDFPLSGYVEVRYDD EKRVVQEPVEIAQEYRSF+YSTPWEVFPEG RPKDA+Q+E+ +K P
Sbjct:    1 MMNIRRVATALSRRPSPNAFRTLCAQPSDAQSNPLSSPMLDQQKSFMASIVEMLPNSVTAARIQSGNSPMGAEMVLEVPNDMTIRVLRFLKLHSSSQFKGFIQATAVDYPERKDRFRVVYSLLSTRFNARIRVQTYVDEITPLESATKIFKGADWFEREVWDMYGVFFHSHPDMRRILTDYGFEGHPQRKDFPLSGYVEVRYDDTEKRVVQEPVEIAQEYRSFEYSTPWEVFPEGTRPKDALQIEEPEKTP 251          
BLAST of Gchil7134.t1 vs. uniprot
Match: M2X9T2_GALSU (NADH dehydrogenase (Ubiquinone) Fe-S protein 3 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X9T2_GALSU)

HSP 1 Score: 297 bits (761), Expect = 1.510e-98
Identity = 144/210 (68.57%), Postives = 173/210 (82.38%), Query Frame = 0
Query:   37 NAQLEQQKAFLASVVETLPNSITAARIQAGN--APGGGEMVLEVPHSMTVRVLRFLKLHSSSQFKGFVQCTAVDYPERKDRFRVVYSLLSTRFNARIRVQTYVDEVTPVESATTVFKGADWFEREVWDMYGVFFHSHPDLRRILTDYGFEGHPQRKDFPLSGYVEVRYDDAEKRVVQEPVEIAQEYRSFDYSTPWEVFPEGKRPKDAVQL 244
            N  L QQK FLAS+VE +P  ITAA I  G+    GGGEMVLEVPH  T+ VLRFL+ HSS  +  F+ CTA D+P++  RFRVVY+LLS ++++RIRVQT+VDEVTP+ESAT +FKGA+W EREVWD++GVFF++HPDLRRILTDYGFEGHP RKDFPLSGYVEVRYDD EKRVV EPVEI QEYR+FDY++PWEVFPEG   ++A +L
Sbjct:   54 NTALNQQKNFLASLVEMIPAGITAAYIHKGHDTTHGGGEMVLEVPHDKTIPVLRFLRDHSSCLYDCFIDCTAADFPQKPQRFRVVYNLLSLKYSSRIRVQTHVDEVTPIESATCLFKGANWPEREVWDLFGVFFYNHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDTEKRVVIEPVEITQEYRAFDYTSPWEVFPEGGNFEEAEKL 263          
BLAST of Gchil7134.t1 vs. uniprot
Match: A0A5J4Z2V5_PORPP (NADH dehydrogenase ubiquinone iron-sulfur protein 3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2V5_PORPP)

HSP 1 Score: 297 bits (761), Expect = 1.970e-98
Identity = 153/228 (67.11%), Postives = 178/228 (78.07%), Query Frame = 0
Query:   21 RLFCAPADGAASNPATNA----QLEQQKAFLASVVETLPNSITAARIQAGN--APGGGEMVLEVPHSMTVRVLRFLKLHSSSQFKGFVQCTAVDYPERKDRFRVVYSLLSTRFNARIRVQTYVDEVTPVESATTVFKGADWFEREVWDMYGVFFHSHPDLRRILTDYGFEGHPQRKDFPLSGYVEVRYDDAEKRVVQEPVEIAQEYRSFDYSTPWEVFPEGKRPKDAV 242
            R+F + A  +A  PA       QLEQQK FL+S++E  P  IT ARI   +  A  GGEMVL+V    T ++L FLKLH+++QFK FV  TAVDYP R  RF VVY++LST +NARIRVQT VDEVTP++SA +V+ GADWFEREV+DMYGVFF +HPDLRRILTDYGFEGHPQRKDFPLSG+VEVRYDDA KRVV EPVEIAQEYR FDYSTPWEVFPEG R  +A+
Sbjct:   33 RVFASEAAPSAGAPAREEMMAQQLEQQKRFLSSLLEMCPAWITRARIHKAHDVAHRGGEMVLDVRQDCTTKMLNFLKLHTNAQFKSFVDATAVDYPSRAQRFTVVYNVLSTTYNARIRVQTDVDEVTPLQSAVSVYPGADWFEREVFDMYGVFFFNHPDLRRILTDYGFEGHPQRKDFPLSGFVEVRYDDASKRVVTEPVEIAQEYRQFDYSTPWEVFPEGGRTSEAL 260          
BLAST of Gchil7134.t1 vs. uniprot
Match: M1VG75_CYAM1 (NADH dehydrogenase I iron-sulfur protein 30kDa subunit n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VG75_CYAM1)

HSP 1 Score: 259 bits (661), Expect = 1.040e-82
Identity = 126/196 (64.29%), Postives = 156/196 (79.59%), Query Frame = 0
Query:   39 QLEQQKAFLASVVETLPNSITAARIQAGN-APGGGEMVLEVPHSMTVRVLRFLKLHSSSQFKGFVQCTAVDYPERKDRFRVVYSLLSTRFNARIRVQTYVDEVTPVESATTVFKGADWFEREVWDMYGVFFHSHPDLRRILTDYGFEGHPQRKDFPLSGYVEVRYDDAEKRVVQEPVEIAQEYRSFDYSTPWEVFP 233
            +LE QK F AS+VE LP  I+A  I  G+    GGE+VLEVP + TV VLRFL+ H++ +F+ F+ C  VD+P+R DRFRVVY+L S  +N RIRVQT+V+E+TP+ESAT+VFKGADWFEREV+DM+GVFF +HPDLRRIL+DYG   H  RKDFPLSGY EVRYD+ EKRVV EP+EI QE+R+FD+ TPWE FP
Sbjct:   69 RLESQKRFAASIVEMLPKFISAVYIHHGHDVNSGGELVLEVPPTATVPVLRFLRDHATCRFRHFIDCCGVDFPDRPDRFRVVYNLQSLVYNTRIRVQTHVNELTPLESATSVFKGADWFEREVYDMFGVFFMNHPDLRRILSDYGTSYHALRKDFPLSGYEEVRYDEVEKRVVYEPLEITQEFRTFDFQTPWEHFP 264          
BLAST of Gchil7134.t1 vs. uniprot
Match: A0A1X6NUS8_PORUM (Complex1_30kDa domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NUS8_PORUM)

HSP 1 Score: 255 bits (651), Expect = 1.050e-82
Identity = 125/188 (66.49%), Postives = 147/188 (78.19%), Query Frame = 0
Query:   54 LPNSITAARIQAGNAP--GGGEMVLEVPHSMTVRVLRFLKLHSSSQFKGFVQCTAVDYPER----KDRFRVVYSLLSTRFNARIRVQTYVDEVTPVESATTVFKGADWFEREVWDMYGVFFHSHPDLRRILTDYGFEGHPQRKDFPLSGYVEVRYDDAEKRVVQEPVEIAQEYRSFDYSTPWEVFPEG 235
            LP  IT A I   +    GGGE+VL+VP   TV  LRFL+ HSS+ F+ F+     D+P+R    + RFRV Y LLST FNARIRVQTYVDE TP+ESAT +F GADWFEREVWDMYGVFF++HPD+RRIL+DYGFEGHP R+DFPLSG+VEVRYDD EKRVV EPVEI+QEYR+FDYS+PWE   +G
Sbjct:    2 LPGVITRAAIHHPHDTQYGGGEVVLDVPPDQTVATLRFLQNHSSTSFRCFIDAFGTDFPDRSGVGQGRFRVTYHLLSTTFNARIRVQTYVDETTPLESATAIFAGADWFEREVWDMYGVFFYNHPDMRRILSDYGFEGHPLRRDFPLSGFVEVRYDDTEKRVVTEPVEISQEYRTFDYSSPWEQVGKG 189          
BLAST of Gchil7134.t1 vs. uniprot
Match: A0A7S0G3N2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G3N2_9RHOD)

HSP 1 Score: 253 bits (645), Expect = 4.590e-81
Identity = 126/228 (55.26%), Postives = 165/228 (72.37%), Query Frame = 0
Query:   27 ADGAASNPATNAQLEQQKAFLASVVETLPNSITAARIQAGNAP--GGGEMVLEVPHSMTVRVLRFLKLHSSSQFKGFVQCTAVDYPERKDRFRVVYSLLSTRFNARIRVQTYVDEVTPVESATTVFKGADWFEREVWDMYGVFFHSHPDLRRILTDYGFEGHPQRKDFPLSGYVEVRYDDAEKRVVQEPVEIAQEYRSFDYSTPWEVFPEGKRPKDAVQLEQADKKPE 252
            A G      +N  LE +K FL+S++E  P  IT ARI+  +     GGEMV+E        ++ FLK ++++Q++ ++    VD+P+++ RFRVV++LLS R+ +RIR++TYVDE TP++S T  F GADWFEREV+DMYGVFF  HPDLRRIL+DYGFEGHP RKDFPLSGY EVR+D+ E +VV EPVEI QEYRSFDY++PWEVFPE KR  D   +EQ  K+ E
Sbjct:   31 AGGDTGGKLSNPSLEAKKEFLSSLIEMCPKWITGARIEKASMTINQGGEMVIETTPEHINPLIGFLKRYTNAQYRSYISSCGVDHPDKQQRFRVVHNLLSLRYPSRIRIETYVDEFTPIKSITNWFNGADWFEREVYDMYGVFFTDHPDLRRILSDYGFEGHPLRKDFPLSGYKEVRFDEIEGQVVNEPVEITQEYRSFDYTSPWEVFPEDKR-SDEPMIEQPKKEGE 257          
BLAST of Gchil7134.t1 vs. uniprot
Match: NDUS3_GORGO (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial n=11 Tax=Simiiformes TaxID=314293 RepID=NDUS3_GORGO)

HSP 1 Score: 250 bits (638), Expect = 6.010e-80
Identity = 121/219 (55.25%), Postives = 160/219 (73.06%), Query Frame = 0
Query:   34 PATNAQLEQQKAFLASVVETLPNSITAARIQAGNAPGGGEMVLEVPHSMTVRVLRFLKLHSSSQFKGFVQCTAVDYPERKDRFRVVYSLLSTRFNARIRVQTYVDEVTPVESATTVFKGADWFEREVWDMYGVFFHSHPDLRRILTDYGFEGHPQRKDFPLSGYVEVRYDDAEKRVVQEPVEIAQEYRSFDYSTPWEVFPEGKRPKDAVQLEQADKKPE 252
            P  +   +Q  AF   V E LP  +   ++   N     E+ + +     + VL FL+ H+++QFK  V  TAVD P R++RF +VY+LLS RFN+RIRV+TY DE+TP+ESA +VFK A+W+ERE+WDM+GVFF +HPDLRRILTDYGFEGHP RKDFPLSGYVE+RYDD  KRVV EPVE+AQE+R FD ++PWE FP  ++P ++++LE  DKKP+
Sbjct:   48 PRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFN-----ELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPVYRQPPESLKLEAGDKKPD 261          
BLAST of Gchil7134.t1 vs. uniprot
Match: NDUS3_HUMAN (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial n=13 Tax=Catarrhini TaxID=9526 RepID=NDUS3_HUMAN)

HSP 1 Score: 250 bits (638), Expect = 6.210e-80
Identity = 121/219 (55.25%), Postives = 160/219 (73.06%), Query Frame = 0
Query:   34 PATNAQLEQQKAFLASVVETLPNSITAARIQAGNAPGGGEMVLEVPHSMTVRVLRFLKLHSSSQFKGFVQCTAVDYPERKDRFRVVYSLLSTRFNARIRVQTYVDEVTPVESATTVFKGADWFEREVWDMYGVFFHSHPDLRRILTDYGFEGHPQRKDFPLSGYVEVRYDDAEKRVVQEPVEIAQEYRSFDYSTPWEVFPEGKRPKDAVQLEQADKKPE 252
            P  +   +Q  AF   V E LP  +   ++   N     E+ + +     + VL FL+ H+++QFK  V  TAVD P R++RF +VY+LLS RFN+RIRV+TY DE+TP+ESA +VFK A+W+ERE+WDM+GVFF +HPDLRRILTDYGFEGHP RKDFPLSGYVE+RYDD  KRVV EPVE+AQE+R FD ++PWE FP  ++P ++++LE  DKKP+
Sbjct:   49 PRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFN-----ELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPVYRQPPESLKLEAGDKKPD 262          
BLAST of Gchil7134.t1 vs. uniprot
Match: A0A6G1ATG0_CROCR (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial (Fragment) n=2 Tax=Laurasiatheria TaxID=314145 RepID=A0A6G1ATG0_CROCR)

HSP 1 Score: 247 bits (630), Expect = 2.320e-79
Identity = 120/219 (54.79%), Postives = 157/219 (71.69%), Query Frame = 0
Query:   34 PATNAQLEQQKAFLASVVETLPNSITAARIQAGNAPGGGEMVLEVPHSMTVRVLRFLKLHSSSQFKGFVQCTAVDYPERKDRFRVVYSLLSTRFNARIRVQTYVDEVTPVESATTVFKGADWFEREVWDMYGVFFHSHPDLRRILTDYGFEGHPQRKDFPLSGYVEVRYDDAEKRVVQEPVEIAQEYRSFDYSTPWEVFPEGKRPKDAVQLEQADKKPE 252
            P  +   +Q  AF   V E LP  +   ++   N     E+ + +     + VL FL+ H+++QFK     TAVD P R++RF +VY+LLS RFN+RIRV+TY DE+TPVES   V+K A+W+ERE+WDM+GVFF +HPDLRRILTDYGFEGHP RKDFPLSGYVE+RYDD  KRVV EPVE+AQE+R FD ++PWE FP  ++P ++++LE  DKKPE
Sbjct:    4 PRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFN-----ELEICIHPDGVIPVLTFLRDHTNAQFKSLADLTAVDIPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPVESIVPVYKAANWYEREIWDMFGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPAYRQPPESLKLEAGDKKPE 217          
The following BLAST results are available for this feature:
BLAST of Gchil7134.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IP47_9FLOR1.570e-14883.73NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
R7QLG9_CHOCR4.590e-14177.69Complex1_30kDa domain-containing protein n=1 Tax=C... [more]
M2X9T2_GALSU1.510e-9868.57NADH dehydrogenase (Ubiquinone) Fe-S protein 3 n=1... [more]
A0A5J4Z2V5_PORPP1.970e-9867.11NADH dehydrogenase ubiquinone iron-sulfur protein ... [more]
M1VG75_CYAM11.040e-8264.29NADH dehydrogenase I iron-sulfur protein 30kDa sub... [more]
A0A1X6NUS8_PORUM1.050e-8266.49Complex1_30kDa domain-containing protein n=1 Tax=P... [more]
A0A7S0G3N2_9RHOD4.590e-8155.26Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
NDUS3_GORGO6.010e-8055.25NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
NDUS3_HUMAN6.210e-8055.25NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A6G1ATG0_CROCR2.320e-7954.79NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010218NADH dehydrogenase, subunit CTIGRFAMTIGR01961TIGR01961coord: 77..195
e-value: 1.0E-40
score: 137.0
IPR010218NADH dehydrogenase, subunit CHAMAPMF_01357NDH1_NuoCcoord: 47..204
score: 28.113655
IPR001268NADH:ubiquinone oxidoreductase, 30kDa subunitPFAMPF00329Complex1_30kDacoord: 77..197
e-value: 8.7E-39
score: 132.9
IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilyGENE3D3.30.460.80NADH:ubiquinone oxidoreductase, 30kDa subunitcoord: 27..176
e-value: 1.1E-35
score: 125.1
IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilySUPERFAMILY143243Nqo5-likecoord: 71..229
NoneNo IPR availablePANTHERPTHR10884NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3coord: 43..235
IPR020396NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved sitePROSITEPS00542COMPLEX1_30Kcoord: 157..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:312725..313483 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7134.t1Gchil7134.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 312725..313483 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7134.t1 ID=Gchil7134.t1|Name=Gchil7134.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=253bp
MLSLRRAASTFFPSASRVTHRLFCAPADGAASNPATNAQLEQQKAFLASV
VETLPNSITAARIQAGNAPGGGEMVLEVPHSMTVRVLRFLKLHSSSQFKG
FVQCTAVDYPERKDRFRVVYSLLSTRFNARIRVQTYVDEVTPVESATTVF
KGADWFEREVWDMYGVFFHSHPDLRRILTDYGFEGHPQRKDFPLSGYVEV
RYDDAEKRVVQEPVEIAQEYRSFDYSTPWEVFPEGKRPKDAVQLEQADKK
PE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010218NADH_DH_suC
IPR001268NADH_UbQ_OxRdtase_30kDa_su
IPR037232NADH_quin_OxRdtase_su_C/D-like
IPR020396NADH_UbQ_OxRdtase_CS