Gchil7104.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7104.t1
Unique NameGchil7104.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length179
Homology
BLAST of Gchil7104.t1 vs. uniprot
Match: A0A2V3IXK8_9FLOR (Putative plastid-lipid-associated protein 4, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXK8_9FLOR)

HSP 1 Score: 253 bits (646), Expect = 4.400e-83
Identity = 123/178 (69.10%), Postives = 148/178 (83.15%), Query Frame = 0
Query:    1 MSVQAPSGFKEALINLVQPLNFGRAVVNDSDKQQEIEDLVRQVEATNPSLTPGTDSNLSGVWDMIYTTSRSILAVDKPGFLQSSRIVQEINAQELKGCNAETFKFGPIEFVNSVNFELTASSPSRFEVNFVQFVILNLLKINVRDNERFTGWLEVTYLDEKLRISRGNKGNLFVLVKK 178
            MSV AP+ FK+AL+  V PLNFGR V ++  +Q +IE L RQVEATN SL+PGTD NLSGVWDM+YTTS+SILA   PGFLQS RIVQEINA  LKG N+ETF+FGP++F N+VNFEL  +S  RF+VNFV+FV+LN +++NVR+N RFTGWLEVTYLDE LRISRGN GNLF+L+KK
Sbjct:   37 MSVTAPNTFKQALLEKVHPLNFGRDVADNPAEQLDIEQLARQVEATNKSLSPGTDPNLSGVWDMVYTTSKSILATGSPGFLQSRRIVQEINAAVLKGRNSETFRFGPLQFDNAVNFELNPASEKRFDVNFVEFVLLNFIRVNVRENMRFTGWLEVTYLDEDLRISRGNAGNLFILIKK 214          
BLAST of Gchil7104.t1 vs. uniprot
Match: UPI001CC69F2D (probable plastid-lipid-associated protein 4, chloroplastic isoform X1 n=3 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC69F2D)

HSP 1 Score: 124 bits (312), Expect = 3.970e-32
Identity = 71/166 (42.77%), Postives = 100/166 (60.24%), Query Frame = 0
Query:   10 KEALINLVQPLNFGRAVVNDSDKQQEIEDLVRQVEATNPSLTPGTDSNLSGVWDMIYTTSRSILAVDKPGFLQSSRIVQEINAQELKGCNAETFKFGPIEFVNSVNFELTASSPSRFEVNFVQFVILNLLKINVRDNERFTGWLEVTYLDEKLRISRGNKGNLFVL 175
            K+ L+  + PL+ G       + QQE++ + RQ+E  NP+  P     L+G W++IYTTSRSIL  ++P FL+SS   Q IN   L+  N E++ F      N V  +LT  +P +  V F  F IL L+ I   +  RF G LE+TYLD++LRISRG+KGNLF+L
Sbjct:   81 KDELLETIAPLDRGANA--SPEDQQEVDQIARQLEVVNPTKEPLKSDLLNGKWELIYTTSRSILQTERPKFLRSSVNYQAINVDTLRAQNMESWPF-----FNQVTADLTPLNPRKVAVKFDYFKILGLIPIKAPERARF-GELEITYLDDELRISRGDKGNLFIL 238          
BLAST of Gchil7104.t1 vs. uniprot
Match: UPI00053C48A6 (probable plastid-lipid-associated protein 4, chloroplastic isoform X1 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C48A6)

HSP 1 Score: 119 bits (299), Expect = 3.050e-30
Identity = 72/166 (43.37%), Postives = 99/166 (59.64%), Query Frame = 0
Query:   10 KEALINLVQPLNFGRAVVNDSDKQQEIEDLVRQVEATNPSLTPGTDSNLSGVWDMIYTTSRSILAVDKPGFLQSSRIVQEINAQELKGCNAETFKFGPIEFVNSVNFELTASSPSRFEVNFVQFVILNLLKINVRDNERFTGWLEVTYLDEKLRISRGNKGNLFVL 175
            K+ L + + PL+ G     D   Q++I+ L R++EA NP+  P     L+G W++IYTTS SIL + KP FL+S    Q INA  L+  N ETF F      NSV   L   +P +  V   +F IL L+ +N  D  R  G LE+TY+DE+LR+SRG+KGNLF+L
Sbjct:   76 KQDLYDAIAPLDRGAKATPDD--QRQIDQLARKLEAVNPTKAPLKSDLLNGKWELIYTTSVSILQIKKPRFLRSITNYQAINADTLRVQNMETFPF-----FNSVIGTLRPLNPRKVAVKLERFRILGLIPVNAPDTAR--GELEITYVDEELRLSRGDKGNLFIL 232          
BLAST of Gchil7104.t1 vs. uniprot
Match: A0A067L464_JATCU (PAP_fibrillin domain-containing protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067L464_JATCU)

HSP 1 Score: 119 bits (297), Expect = 6.210e-30
Identity = 69/166 (41.57%), Postives = 98/166 (59.04%), Query Frame = 0
Query:   10 KEALINLVQPLNFGRAVVNDSDKQQEIEDLVRQVEATNPSLTPGTDSNLSGVWDMIYTTSRSILAVDKPGFLQSSRIVQEINAQELKGCNAETFKFGPIEFVNSVNFELTASSPSRFEVNFVQFVILNLLKINVRDNERFTGWLEVTYLDEKLRISRGNKGNLFVL 175
            KE ++  + PL+ G       + QQ ++++ RQ+EA NP+  P   + L+G W++IYTTS+SIL   +P FL+S    Q INA  L+  N E+F F      N V  +LT  +  +  V F +F I  L+ I      R  G LE+TYLDE+LRISRG+KGNLF+L
Sbjct:   78 KEEILEAIAPLDRGADA--SFEDQQRVDEIARQLEAVNPTKEPLKSNLLNGKWELIYTTSQSILQTQRPKFLRSRTNYQAINADTLRAQNMESFPF-----FNQVTADLTPLNAKKVAVKFDKFKIAGLIPIKAPGRAR--GELEITYLDEELRISRGDKGNLFIL 234          
BLAST of Gchil7104.t1 vs. uniprot
Match: A0A2U1MWE3_ARTAN (Plastid-lipid associated protein PAP / fibrillin family protein n=3 Tax=Anthemideae TaxID=102810 RepID=A0A2U1MWE3_ARTAN)

HSP 1 Score: 118 bits (295), Expect = 1.120e-29
Identity = 72/169 (42.60%), Postives = 99/169 (58.58%), Query Frame = 0
Query:    7 SGFKEALINLVQPLNFGRAVVNDSDKQQEIEDLVRQVEATNPSLTPGTDSNLSGVWDMIYTTSRSILAVDKPGFLQSSRIVQEINAQELKGCNAETFKFGPIEFVNSVNFELTASSPSRFEVNFVQFVILNLLKINVRDNERFTGWLEVTYLDEKLRISRGNKGNLFVL 175
            +  KE L++ +  L+ G     +   QQEIE +VR++EA NP+  P     L+G W++IYTTS+SIL   +P FL+S    Q INA  L+  N E+F        N V  +LT  +  +  V F  F IL L+ +   D  R  G LE+TYLDE+LR+SRG+KGNLFVL
Sbjct:   71 TSIKEELLDAISKLDRGADATTED--QQEIELIVRKLEAANPTKEPLKSPLLNGKWELIYTTSQSILQTKRPKFLRSRVNYQGINADTLRAQNMESFPT-----FNQVTADLTPVNAKKVAVQFDYFKILGLIPVKAPDTAR--GSLEITYLDEELRVSRGDKGNLFVL 230          
BLAST of Gchil7104.t1 vs. uniprot
Match: A0A251UMX5_HELAN (Putative plastid-lipid associated protein PAP / fibrillin family protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UMX5_HELAN)

HSP 1 Score: 118 bits (295), Expect = 1.150e-29
Identity = 71/169 (42.01%), Postives = 98/169 (57.99%), Query Frame = 0
Query:    7 SGFKEALINLVQPLNFGRAVVNDSDKQQEIEDLVRQVEATNPSLTPGTDSNLSGVWDMIYTTSRSILAVDKPGFLQSSRIVQEINAQELKGCNAETFKFGPIEFVNSVNFELTASSPSRFEVNFVQFVILNLLKINVRDNERFTGWLEVTYLDEKLRISRGNKGNLFVL 175
            S  K+ L++ + PL+ G       + Q+ IE +VR++EA NP+  P     L G W++IYTTS+SIL   +P FL+S    Q INA  L+  N E+F        N V  +LT  +  +  V F  F IL L+ +   D  R  G LE+TYLDE+LR+SRG+KGNLFVL
Sbjct:   72 SSIKQELLDAIAPLDRGAEA--SPEDQEAIEQIVRKLEAANPTKEPLKSPFLDGKWELIYTTSQSILQTKRPKFLRSRVNYQAINADTLRAQNMESFPT-----FNQVTADLTPVNSRKVAVKFDYFKILGLIPVKAPDTAR--GSLEITYLDEELRVSRGDKGNLFVL 231          
BLAST of Gchil7104.t1 vs. uniprot
Match: A0A7C9DQZ2_OPUST (PAP_fibrillin domain-containing protein n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DQZ2_OPUST)

HSP 1 Score: 118 bits (295), Expect = 1.290e-29
Identity = 69/166 (41.57%), Postives = 97/166 (58.43%), Query Frame = 0
Query:   10 KEALINLVQPLNFGRAVVNDSDKQQEIEDLVRQVEATNPSLTPGTDSNLSGVWDMIYTTSRSILAVDKPGFLQSSRIVQEINAQELKGCNAETFKFGPIEFVNSVNFELTASSPSRFEVNFVQFVILNLLKINVRDNERFTGWLEVTYLDEKLRISRGNKGNLFVL 175
            KE L+  ++PL+ G     +   QQ I+ L R++EA NP+  P     L+G W++IYTTS+SIL  ++P FL+S    Q IN   L+  N ET+ F      N V  +LT  +  +  V F  F IL L+ +   +  R  G LE+TYLDE LR+SRG+KGNLF+L
Sbjct:   77 KEELLQAIEPLDRGADATPED--QQRIDQLTRKLEAVNPTKEPLKSDLLNGKWELIYTTSKSILQTERPKFLRSRVNYQAINLDTLRAQNMETWPF-----FNQVTADLTPLNSRKVAVKFDYFKILGLIPVKAPETAR--GSLEITYLDEDLRVSRGDKGNLFIL 233          
BLAST of Gchil7104.t1 vs. uniprot
Match: A0A022R4H8_ERYGU (PAP_fibrillin domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022R4H8_ERYGU)

HSP 1 Score: 118 bits (295), Expect = 1.630e-29
Identity = 70/172 (40.70%), Postives = 101/172 (58.72%), Query Frame = 0
Query:    4 QAPSGFKEALINLVQPLNFGRAVVNDSDKQQEIEDLVRQVEATNPSLTPGTDSNLSGVWDMIYTTSRSILAVDKPGFLQSSRIVQEINAQELKGCNAETFKFGPIEFVNSVNFELTASSPSRFEVNFVQFVILNLLKINVRDNERFTGWLEVTYLDEKLRISRGNKGNLFVL 175
            ++    KE L+  + PL+ G     +   QQ I+ + R++EA NP+  P   S LSG W++IYTTS+SIL + +P FL+S    Q INA  L+  N E+   GP  F N V  +LT  +  +  V F  F +  ++ +   D  R  G LE+TYLDE+LR+SRG+KGNLF+L
Sbjct:   84 KSADAIKEELLEAIAPLDRGAEATPED--QQTIDQIARKLEAINPTKEPLKSSLLSGKWELIYTTSQSILQIKRPKFLRSRTNYQAINADTLRAQNMES---GP--FFNQVTADLTPLNTKKVAVKFDYFKLGGVIPVKAPDTAR--GELEITYLDEELRVSRGDKGNLFIL 246          
BLAST of Gchil7104.t1 vs. uniprot
Match: A0A7N0RH08_KALFE (PAP_fibrillin domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0RH08_KALFE)

HSP 1 Score: 117 bits (294), Expect = 2.150e-29
Identity = 71/166 (42.77%), Postives = 95/166 (57.23%), Query Frame = 0
Query:   10 KEALINLVQPLNFGRAVVNDSDKQQEIEDLVRQVEATNPSLTPGTDSNLSGVWDMIYTTSRSILAVDKPGFLQSSRIVQEINAQELKGCNAETFKFGPIEFVNSVNFELTASSPSRFEVNFVQFVILNLLKINVRDNERFTGWLEVTYLDEKLRISRGNKGNLFVL 175
            KE L+  + PL+ G     +   Q+ I+ L R++EA N    P     L+G W++IYTTS SIL  ++P FL+S    Q IN   L+  N E+F F      N V  +LT  SPS+  V F  F IL L+ +   D  R  G L++TYLDE LRISRG+KGNLF+L
Sbjct:   86 KEELLEAIAPLDRGAEATPED--QERIDQLARKLEAANRVKEPLKSDLLNGKWELIYTTSTSILQRERPKFLRSRTNYQAINVDTLRAQNQESFPF-----FNQVTADLTPLSPSKVAVKFDYFKILGLIPVKAPDRAR--GELDITYLDEDLRISRGDKGNLFIL 242          
BLAST of Gchil7104.t1 vs. uniprot
Match: A0A1Y5HYH2_OSTTA (PAP_fibrillin domain-containing protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5HYH2_OSTTA)

HSP 1 Score: 117 bits (292), Expect = 2.780e-29
Identity = 65/155 (41.94%), Postives = 102/155 (65.81%), Query Frame = 0
Query:   24 RAVVNDSDKQQEIEDLVRQVEATNPSLTPGTDSNLSGVWDMIYTTSRSILAVDKPGFLQ-SSRIVQEINAQELKGCNAETFKFGPIEFVNSVNFELTASSPSRFEVNFVQFVILN-LLKINVRDNERFTGWLEVTYLDEKLRISRGNKGNLFVLV 176
            R ++   +++++I+DL R +EA NP+    + S ++G W+++YTTS SIL  +KP FL+ S +I Q I+A  L+  N ETF F      N+V  ELT +S S  +V F +F +LN L+K+   D  R  G L++T++D+ +R+SRG+KGNLF+LV
Sbjct:   80 RGILASDEEKRKIDDLARALEALNPNPKSLSASCINGEWELVYTTSASILGTNKPSFLRPSGKIYQTIDADALRARNRETFPF-----YNAVEAELTPTSDSAVKVQFKKFYVLNGLIKVTAPDRAR--GALDITFVDDTVRVSRGDKGNLFILV 227          
The following BLAST results are available for this feature:
BLAST of Gchil7104.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXK8_9FLOR4.400e-8369.10Putative plastid-lipid-associated protein 4, chlor... [more]
UPI001CC69F2D3.970e-3242.77probable plastid-lipid-associated protein 4, chlor... [more]
UPI00053C48A63.050e-3043.37probable plastid-lipid-associated protein 4, chlor... [more]
A0A067L464_JATCU6.210e-3041.57PAP_fibrillin domain-containing protein n=1 Tax=Ja... [more]
A0A2U1MWE3_ARTAN1.120e-2942.60Plastid-lipid associated protein PAP / fibrillin f... [more]
A0A251UMX5_HELAN1.150e-2942.01Putative plastid-lipid associated protein PAP / fi... [more]
A0A7C9DQZ2_OPUST1.290e-2941.57PAP_fibrillin domain-containing protein n=2 Tax=Op... [more]
A0A022R4H8_ERYGU1.630e-2940.70PAP_fibrillin domain-containing protein n=1 Tax=Er... [more]
A0A7N0RH08_KALFE2.150e-2942.77PAP_fibrillin domain-containing protein n=1 Tax=Ka... [more]
A0A1Y5HYH2_OSTTA2.780e-2941.94PAP_fibrillin domain-containing protein n=2 Tax=Os... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 9..175
e-value: 1.1E-30
score: 107.1
NoneNo IPR availablePANTHERPTHR31906:SF14PLASTID-LIPID-ASSOCIATED PROTEIN 4, CHLOROPLASTIC-RELATEDcoord: 9..175
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 9..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:140313..140849 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7104.t1Gchil7104.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 140313..140849 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7104.t1 ID=Gchil7104.t1|Name=Gchil7104.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=179bp
MSVQAPSGFKEALINLVQPLNFGRAVVNDSDKQQEIEDLVRQVEATNPSL
TPGTDSNLSGVWDMIYTTSRSILAVDKPGFLQSSRIVQEINAQELKGCNA
ETFKFGPIEFVNSVNFELTASSPSRFEVNFVQFVILNLLKINVRDNERFT
GWLEVTYLDEKLRISRGNKGNLFVLVKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom
IPR039633PAP