Gchil7094.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7094.t1
Unique NameGchil7094.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length188
Homology
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BLAST of Gchil7094.t1 vs. uniprot
Match: A0EDN2_PARTE (RNase NYN domain-containing protein n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0EDN2_PARTE)

HSP 1 Score: 62.4 bits (150), Expect = 4.540e-8
Identity = 42/145 (28.97%), Postives = 67/145 (46.21%), Query Frame = 0 
Query:    5 LVGEDVSRRSGSSFSESAPK------VILDGQNIG-RYGQWDSRSKLPPLRSEYILDAIRFCEENGKKPAVILPRGIVEQKKVGKP------NFQADPEDRVEILELHRKGKVFFVPNFTYDDNYIIAYGIRNKIPFVTNDKCRD 136
            L G  +       + E  PK      +I+DG N+  RYGQ   +S++    S+ +  A+ F  + G    +ILP     + ++ K       N    P+D   +LE+  KG  + VPN+ YDD+Y+I Y        +TND+  D
Sbjct:  485 LHGIQIQNVKEQKWEEEIPKELIRKLIIIDGMNVAMRYGQ--EQSQVAKFCSQGLKCALEFWVKRGHDVMIILPDFCFNESEISKKKLTNQNNANKLPDDVKMLLEMKNKGYAYGVPNWNYDDSYMIQYAREKGGLILTNDRYND 627
The following BLAST results are available for this feature:
BLAST of Gchil7094.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0EDN2_PARTE4.540e-828.97RNase NYN domain-containing protein n=2 Tax=Parame... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11980coord: 10..170
e-value: 6.0E-20
score: 73.4
IPR021869Ribonuclease Zc3h12a-like, NYN domainPFAMPF11977RNase_Zc3h12acoord: 24..141
e-value: 8.3E-5
score: 22.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:67348..67911 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7094.t1Gchil7094.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 67348..67911 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7094.t1 ID=Gchil7094.t1|Name=Gchil7094.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=188bp
MRSGLVGEDVSRRSGSSFSESAPKVILDGQNIGRYGQWDSRSKLPPLRSE
YILDAIRFCEENGKKPAVILPRGIVEQKKVGKPNFQADPEDRVEILELHR
KGKVFFVPNFTYDDNYIIAYGIRNKIPFVTNDKCRDVVAGQVPEKKMQEM
AEYVRKCRAEFDVKDGKFALRSGAWPRCDYAYSHGRM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021869RNase_Zc3h12_NYN