Gchil7083.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7083.t1
Unique Name	Gchil7083.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	214

Homology

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BLAST of Gchil7083.t1 vs. uniprot
Match: A0A2V3ISA1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISA1_9FLOR)

HSP 1 Score: 171 bits (432), Expect = 4.270e-50
Identity = 101/221 (45.70%), Postives = 132/221 (59.73%), Query Frame = 0

Query:    1 MGSSLSTASRTAAQQFAK-------RAPKTNAATSPSPSNPNLSKSDPSITAQVRKQRSNQNTVLYQRPTVDDWAAALKKVSNVITSSTWD-EHQTLGRHKSSTDRHPAQRSHATTERLPQQRTKTEAEMHDAEFGGYAPAENPTGRMSQVDVLDLFNLRRQQSKQWDVKALSGKYKVDQGDLADLLRFTRTYAGRVDQDGQIRGYYNPDPKNTIKRFERD 213
            MGSSLST  ++A++   K       +APKTN   S  P++P        +TA+V    S Q   LYQRPT  +WAAALK +SNVI SS W  E Q +  +    +RH AQRS  TT +LPQ+       +            +  GR++QV+VL+LFNLRR    +W   ALS KY VD+ D+ +LL++TRTY GR+D DG++R YYNPDPKNTI RFE D
Sbjct:    1 MGSSLSTIPKSASRSVVKAVPPAIKQAPKTNR--SQVPNSP--------VTARVSTPASTQQPELYQRPTAQEWAAALKNMSNVIQSSAWQGEVQPVHPNSPRLERHAAQRSSTTTRKLPQRSAPLHPGIRPVGLEVEHVRRSNAGRLTQVNVLELFNLRRDDPARWTAAALSAKYAVDESDVVNLLKYTRTYTGRIDSDGKVRAYYNPDPKNTISRFEND 211

The following BLAST results are available for this feature:

BLAST of Gchil7083.t1 vs. uniprot

BLAST of Gchil7083.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3ISA1_9FLOR	4.270e-50	45.70	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009622	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4	PFAM	PF06784	UPF0240	coord: 98..186 e-value: 2.5E-10 score: 40.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..114

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000131_pilon	contig	tig00000131_pilon:545106..545747 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7083.t1	Gchil7083.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000131_pilon 545106..545747 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7083.t1 ID=Gchil7083.t1|Name=Gchil7083.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=214bp
MGSSLSTASRTAAQQFAKRAPKTNAATSPSPSNPNLSKSDPSITAQVRKQ
RSNQNTVLYQRPTVDDWAAALKKVSNVITSSTWDEHQTLGRHKSSTDRHP
AQRSHATTERLPQQRTKTEAEMHDAEFGGYAPAENPTGRMSQVDVLDLFN
LRRQQSKQWDVKALSGKYKVDQGDLADLLRFTRTYAGRVDQDGQIRGYYN
PDPKNTIKRFERD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009622	NDUFAF4