Gchil7070.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7070.t1
Unique NameGchil7070.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length231
Homology
BLAST of Gchil7070.t1 vs. uniprot
Match: A0A2V3J2I3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2I3_9FLOR)

HSP 1 Score: 130 bits (326), Expect = 1.400e-31
Identity = 62/150 (41.33%), Postives = 89/150 (59.33%), Query Frame = 0
Query:    3 EPDGRLRQSLEFIFCWHQVEFHDMSTEKRPPLHLSLPRVDENQWDFYWNISPLLLVFTTLVVAYHSSPLMGNDNNRRCWSSWQVLFVEFGVMSLMVFLGTAKYGVHVSGRSDDWRAWK-DEHIPGPRGSPIPLADIMIHFLRNLEATSFV 151
            EP+GR+R +L ++FCWHQVEFHDM    R  L+L++P   +      W +S LL V T  + A+HS  +  N  +RR W +WQVL VE+ V  LM FL T ++GV  + R++D+R W  D   P P G  + L  ++I +LR L   + V
Sbjct:   68 EPEGRMRTNLGYLFCWHQVEFHDMEAPDRSGLYLTMPFFQDIDRQDLWRVSNLLAVPTPPLAAFHSRQMANNPTDRRNWLTWQVLTVEWAVFVLMAFLDTGRFGVRCNVRTNDYRVWSHDNACPSPVGRLVRLPRMIIVYLRGLGIQNLV 217          
BLAST of Gchil7070.t1 vs. uniprot
Match: A0A2V3IPW8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPW8_9FLOR)

HSP 1 Score: 57.4 bits (137), Expect = 5.370e-6
Identity = 37/123 (30.08%), Postives = 63/123 (51.22%), Query Frame = 0
Query:    5 DGRLRQSLE-FIFCWHQVEFHDMSTEKRPPLHLSLPRVDENQWDFYWNISPLLLVFTTLVVAYHSSPLMGNDNNRRCWSSWQVLFVEFGVMSLMVFLGTAKYGVHVSGRSDDWRAWKDEHIPG 126
            + RLR + + ++FCWH +EF D+S   R  L++  P   +N  +F  +++  L V T  V+AY+S  ++ +          ++   E+ V +LM FL +   GV V  R++D R       PG
Sbjct:  263 EARLRSNRDGYMFCWHNIEFFDVSPADREKLYVRAP---QNWGEF--DVTRDLSVITPPVLAYYSGEVLRDSALSE--RVMRIAIAEWAVCALMAFLQSVSEGVRVFTRTEDPRVNFFRGFPG 378          
The following BLAST results are available for this feature:
BLAST of Gchil7070.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J2I3_9FLOR1.400e-3141.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IPW8_9FLOR5.370e-630.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 108..230
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..85
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..107
NoneNo IPR availableTMHMMTMhelixcoord: 81..103
NoneNo IPR availableTMHMMTMhelixcoord: 48..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000131_piloncontigtig00000131_pilon:413608..414588 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7070.t1Gchil7070.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000131_pilon 413608..414588 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7070.t1 ID=Gchil7070.t1|Name=Gchil7070.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=231bp
MHEPDGRLRQSLEFIFCWHQVEFHDMSTEKRPPLHLSLPRVDENQWDFYW
NISPLLLVFTTLVVAYHSSPLMGNDNNRRCWSSWQVLFVEFGVMSLMVFL
GTAKYGVHVSGRSDDWRAWKDEHIPGPRGSPIPLADIMIHFLRNLEATSF
VPAGMSDGESFVEDPFILPVEGVYPPVESNVLLLTASYPPAPPGAATKHE
LSYEPPVAQVDMPPGETTVEAESRVGDAMA*
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