Gchil7046.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7046.t1
Unique NameGchil7046.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length348
Homology
BLAST of Gchil7046.t1 vs. uniprot
Match: A0A2V3J6X0_9FLOR (RNA polymerase sigma factor SigA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6X0_9FLOR)

HSP 1 Score: 387 bits (994), Expect = 2.620e-132
Identity = 194/272 (71.32%), Postives = 230/272 (84.56%), Query Frame = 0
Query:   76 HANELNPLPPAHWHLIVGQRNELVIKWLWLVGAVARKSHQIFISAFPEAEPVISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEELERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLREVVSDDISNWAELM 347
            HA+  NPLPP  WHLI+ QRN+LV+KWLWLV AVARK+HQIF+SAFPEA P +S SDLVQEGV GLITAVER+D S+ QPFD+YAFY++KY+ILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQ A G  VSLS+VA+LA VDR+AA+LY++RS+++ SID P+ + +S  DAPPLRDFLVDHS              AVAEL++S+ LEELER+VLWLK+GLGDG+ R+R EVSRILDVRVHTVKRAEL AL KLREVV++D+SNWAEL+
Sbjct:    3 HASRTNPLPPHDWHLILRQRNQLVVKWLWLVYAVARKTHQIFLSAFPEAAPALSMSDLVQEGVCGLITAVERFDASRGQPFDSYAFYSIKYAILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQIANGKPVSLSQVAQLAQVDREAAKLYIQRSRSLWSIDTPIHR-HSQRDAPPLRDFLVDHSVDVSRHVESMCTREAVAELVQSTELEELERNVLWLKYGLGDGIERVRAEVSRILDVRVHTVKRAELRALNKLREVVTEDVSNWAELI 273          
BLAST of Gchil7046.t1 vs. uniprot
Match: R7QRB1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRB1_CHOCR)

HSP 1 Score: 230 bits (587), Expect = 2.070e-71
Identity = 125/220 (56.82%), Postives = 159/220 (72.27%), Query Frame = 0
Query:  128 ISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRA-GGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEELERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLREVVSDDISNWAEL 346
            +S  D+ QEGV GL+TAVERWD +K+  FD +AFY++K++ILRAI+NQ+RPIRLPVHVLNKLSK+R ++ Q+  + GG + S+ EVARLAGV  K A+LYL+RS+ + SID PVR    G +A  LR+FLVD S              AV EL++ + LEELERSVL LK+GL DGV R+R EVSRILDVRV  V+RAELSAL+KLR    +D + W  L
Sbjct:    5 LSLGDMTQEGVCGLMTAVERWDPAKDYAFDAFAFYSIKHAILRAIENQSRPIRLPVHVLNKLSKMRKIKQQVDLSKGGREPSVQEVARLAGVGYKEAELYLDRSKTLRSIDAPVR---GGAEAS-LREFLVDESVDVARQVERACSREAVQELVKGTDLEELERSVLLLKYGLSDGVERVRAEVSRILDVRVEKVRRAELSALRKLRVTAGEDWAGWTGL 220          
BLAST of Gchil7046.t1 vs. uniprot
Match: A0A4P5VE37_9CYAN (RNA polymerase sigma factor n=1 Tax=Cyanobium sp. TaxID=2164130 RepID=A0A4P5VE37_9CYAN)

HSP 1 Score: 120 bits (302), Expect = 5.780e-28
Identity = 85/256 (33.20%), Postives = 126/256 (49.22%), Query Frame = 0
Query:   83 LPPAHWHLIVGQ----RNELVIKWLWLVGAVARKSHQIFISAFPEAEPVISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEELERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLRE 334
            L P+   L + Q    +  ++   L LV AVA+K  Q            +   DLVQEG +GL  AVER+D ++   F TYA++ ++  I RAI +Q+R IRLPVH+  KL++++  + +L    G   SL+E+A   GV     +L ++R    +S+D PV Q         LRD L DH                +  L+    L   E SV+ L+FGL D   R  TE+   + +    V++ E SAL KLR+
Sbjct:   68 LKPSELRLALHQGRRAKERMIQANLRLVVAVAKKYQQ----------RGLELLDLVQEGTLGLERAVERFDPTRGFRFSTYAYWWIRQGITRAIASQSRSIRLPVHITEKLNRLKRAQRELSLRLGRSPSLAELALELGVSEDTVRLIMQRQPQAISLDRPVGQGQE----TDLRDLLEDHHPTPEQVLTRAQLRADLMALLEE--LSSREASVIRLRFGLEDDTPRTLTEIGEQMGISRERVRQIEASALLKLRQ 307          
BLAST of Gchil7046.t1 vs. uniprot
Match: A0A7V6CMY5_9BACT (RNA polymerase sigma factor n=2 Tax=candidate division WOR-3 bacterium TaxID=2052148 RepID=A0A7V6CMY5_9BACT)

HSP 1 Score: 122 bits (305), Expect = 3.360e-27
Identity = 74/243 (30.45%), Postives = 129/243 (53.09%), Query Frame = 0
Query:   91 IVGQRNELVIKWLWLVGAVARKSHQIFISAFPEAEPVISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEELERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLR 333
            I+  R++++   + LV ++A+K           A   + FSDLV+EG +GLI AVE+++  K   F TYA + +K +I RA+  Q++ +R+P H+ + ++KI    H+  +  G + ++SE+A+  G+ ++  + Y +  Q  +S+D P+    SG     + DF+ D                   E I  + L + E  +L L+FG+GDG+ R   EV +I ++    V++ E  ALKKLR
Sbjct:  285 ILFARDKMISGNVRLVVSIAKKY----------ANRGLEFSDLVEEGNVGLIKAVEKFNYKKGYKFSTYATWWIKQAITRALAEQSKTVRIPAHIQDAINKITRAHHKFIQTYGREPTVSELAQRLGMSKEKIERYQKIVQHGVSLDKPIDDEESGF----IGDFMADEKSTSPARKAGIALLNEKLEKILQTYLSKREEKILKLRFGIGDGIQRTLEEVGQIFNITRERVRQIEAKALKKLR 513          
BLAST of Gchil7046.t1 vs. uniprot
Match: A0A7C5PPT3_9BACT (RNA polymerase sigma factor RpoD n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5PPT3_9BACT)

HSP 1 Score: 118 bits (296), Expect = 1.070e-26
Identity = 77/226 (34.07%), Postives = 125/226 (55.31%), Query Frame = 0
Query:  128 ISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEEL------ERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLREVV-SDDISNWAEL 346
            +SF DL+QEG  GL+ AVE+++  +   F TYA + ++ +I R+I +QAR IR+PVH++  +SK+R V+ +L +A G + ++ EVA  AG+  + A+   + S+  +S+D P+  S    D     DF+ D S              A  E+++    E L      ER ++ L++GLGDG      EV RI  V    V++ E  AL+KL+  V +  +SN+ E+
Sbjct:  148 LSFLDLIQEGNTGLMKAVEKYEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETMSKLRNVQKKLVQAKGREPTIEEVAEAAGISVEEAKRVTKISKHPISLDRPIGDS----DDSYFGDFIEDDSAVAPAQA-------ASGEMLKERIREVLNTLTFREREIIKLRYGLGDGYTYTLEEVGRIFRVTRERVRQIEAKALRKLQHPVRARQLSNFLEI 362          
BLAST of Gchil7046.t1 vs. uniprot
Match: A0A1V5KD86_9BACT (RNA polymerase sigma factor SigA n=2 Tax=Bacteria candidate phyla TaxID=1783234 RepID=A0A1V5KD86_9BACT)

HSP 1 Score: 119 bits (298), Expect = 3.960e-26
Identity = 79/239 (33.05%), Postives = 123/239 (51.46%), Query Frame = 0
Query:   95 RNELVIKWLWLVGAVARKSHQIFISAFPEAEPVISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEELERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLR 333
            R ELV+  L LV ++A+K               +SF DL+QEG IGL+ AVER++  +   F TYA + ++ +I RAI +QAR IR+PVH++  ++K+  V  Q  +  G +    E+A+  G+  +  +  L+ SQ  +S++ P+ +         L DF+ D                   E +  + L+E E  VL L+FG+GDGV     EV +I  V    V++ E  AL+KLR
Sbjct:  341 RKELVVANLRLVVSIAKKY----------INKGLSFLDLIQEGNIGLMRAVERFEYKRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLNKVARQFVQQYGREPKPEEIAKKMGMSAEKVRSVLKISQHPISLETPIGEEKDSH----LGDFIEDKDAISPAAAAVNVLLKEQIEKVLHT-LKEREAEVLRLRFGIGDGVPHTLEEVGKIFKVTRERVRQIEAKALRKLR 564          
BLAST of Gchil7046.t1 vs. uniprot
Match: D3T358_THEIA (RNA polymerase, sigma 70 subunit, RpoD subfamily n=2 Tax=Thermoanaerobacter TaxID=1754 RepID=D3T358_THEIA)

HSP 1 Score: 114 bits (284), Expect = 7.870e-26
Identity = 73/207 (35.27%), Postives = 112/207 (54.11%), Query Frame = 0
Query:  128 ISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEELERSVLWLKFGLGDGVGRLRTEVSRILD-VRVHTVKRAELSALKKLR 333
            ISF DL+QEG +GL+ AVER+D  K   F TYA + +K +I RAI +QAR IR+PVH++  ++K+  ++ Q  +  G + S+ E+A    +  K A++ LE  Q ++S++ PV +  +G     L D + D                   + + S+ L   E  VL L+FGL DG  R   EV + L  +    V++ E  ALK+LR
Sbjct:   60 ISFPDLIQEGNLGLLKAVERFDYRKGYKFSTYATWWIKQTITRAIADQARTIRIPVHMVESVNKLLKIQKQFLQKLGREPSIEEIAEEMNISEKKAKVLLEIVQGIVSLEEPVGEDENGK----LGDIIADKEAVDPVEELESMLLKEQVDEVLST-LAPREEKVLRLRFGLDDGKIRTLEEVGKELGGISRERVRQIETKALKRLR 261          
BLAST of Gchil7046.t1 vs. uniprot
Match: Q8S9C9_CYAPA (RNA polymerase sigma factor n=1 Tax=Cyanophora paradoxa TaxID=2762 RepID=Q8S9C9_CYAPA)

HSP 1 Score: 117 bits (292), Expect = 7.950e-26
Identity = 79/241 (32.78%), Postives = 128/241 (53.11%), Query Frame = 0
Query:   95 RNELVIKWLWLVGAVARKSHQIFISAFPEAEPVISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAM--LSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEELERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLR 333
            R+ LV   L  V AVA+K H+            +S  DL+QEG IGLI AVE++D      F TYA + ++ +I R+IQN +R IRLP H   K+++I+     L R+ G Q + +E+A   G+D    + ++E + A+  +S+D+P+ +S++   +  + DF+   +              +VA  +  + L E E  VL ++FGL DG  +   +V   L V    V++ E+ AL+KLR
Sbjct:  188 RDRLVRANLRWVVAVAKKYHK--------QRGTMSMQDLIQEGNIGLIRAVEKFDPRMGYRFTTYATWWIRQAITRSIQNSSREIRLPAHRHEKINRIKRATVALSRSLGRQPTEAEIAEHVGLDPSRMRKFVESAAAVATVSLDVPINESDN--QSATIGDFIRSENEGPADRAERELMRESVARTLAKA-LSEREYMVLRMRFGLDDGEPKTLNQVGETLGVTRERVRQIEMKALRKLR 417          
BLAST of Gchil7046.t1 vs. uniprot
Match: A0A6P0T449_9CYAN (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Cyanothece sp. SIO2G6 TaxID=2607797 RepID=A0A6P0T449_9CYAN)

HSP 1 Score: 114 bits (286), Expect = 1.020e-25
Identity = 73/211 (34.60%), Postives = 109/211 (51.66%), Query Frame = 0
Query:  128 ISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIRSSPLEELERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLREVVSD 338
            +   DL+QEG IG+   VE++D SK   F TYA++ ++ +I RAI  + R IRLP+H+  KL+KI+ V+ QL +  G   S+ E+A    +  K  + YLERS+  LS+DI V  +        L D L D                 +++LI  S L   +R VL L+FGL DG      ++   + +    V++ E  AL KLR+   D
Sbjct:  108 VDLLDLIQEGTIGMQRGVEKFDPSKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKVQRQLAQQYGRSASVEEIATEMKLTTKQIRDYLERSRLPLSLDIRVGDNQD----TELGDLLEDDGQSPEEYAAHADLRSQLSQLI--SDLTPQQREVLSLRFGLEDGKTMTLAKIGSRMQISRERVRQIEREALTKLRKRQGD 312          
BLAST of Gchil7046.t1 vs. uniprot
Match: D1C4W5_SPHTD (RNA polymerase sigma factor n=2 Tax=Sphaerobacter TaxID=2056 RepID=D1C4W5_SPHTD)

HSP 1 Score: 114 bits (286), Expect = 1.510e-25
Identity = 75/225 (33.33%), Postives = 120/225 (53.33%), Query Frame = 0
Query:  128 ISFSDLVQEGVIGLITAVERWDGSKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQRAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAPPLRDFLVDHSXXXXXXXXXXXXXXAVAELIR---SSPLEEL---ERSVLWLKFGLGDGVGRLRTEVSRILDVRVHTVKRAELSALKKLREVVSDDISNWAEL 346
            +S  DL+QEG +GLI AV+++D  +   F TYA + ++ +I RAI +Q R IRLPVH+++ +++ R    QL +  G      EVA    V  +  + ++  +Q  +S++ P+ +   G     L D + D                AV  L++   +  LEEL   ER VL L+FGLG+G     +EV + LD+    V++ E  AL+KLR   +D ++ +AEL
Sbjct:  128 LSLLDLIQEGNLGLIRAVQKYDWRRGYRFSTYATWWIRQAITRAIADQGRTIRLPVHMIDSITRYRRTVMQLTQELGRPPRAEEVAEAMSVPPEKVEQFIRAAQRTISLEKPIGEDEEGT----LADLIADE-------VARSPEEEAVETLLQRDVAEVLEELTPRERLVLQLRFGLGNGSPHTLSEVGQQLDISRERVRQIESEALRKLRRRAADRLAAYAEL 341          
The following BLAST results are available for this feature:
BLAST of Gchil7046.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6X0_9FLOR2.620e-13271.32RNA polymerase sigma factor SigA n=1 Tax=Gracilari... [more]
R7QRB1_CHOCR2.070e-7156.82Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A4P5VE37_9CYAN5.780e-2833.20RNA polymerase sigma factor n=1 Tax=Cyanobium sp. ... [more]
A0A7V6CMY5_9BACT3.360e-2730.45RNA polymerase sigma factor n=2 Tax=candidate divi... [more]
A0A7C5PPT3_9BACT1.070e-2634.07RNA polymerase sigma factor RpoD n=1 Tax=Planctomy... [more]
A0A1V5KD86_9BACT3.960e-2633.05RNA polymerase sigma factor SigA n=2 Tax=Bacteria ... [more]
D3T358_THEIA7.870e-2635.27RNA polymerase, sigma 70 subunit, RpoD subfamily n... [more]
Q8S9C9_CYAPA7.950e-2632.78RNA polymerase sigma factor n=1 Tax=Cyanophora par... [more]
A0A6P0T449_9CYAN1.020e-2534.60RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]
D1C4W5_SPHTD1.510e-2533.33RNA polymerase sigma factor n=2 Tax=Sphaerobacter ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000943RNA polymerase sigma-70PRINTSPR00046SIGMA70FCTcoord: 156..164
score: 42.01
coord: 285..297
score: 37.07
coord: 321..332
score: 36.77
coord: 132..145
score: 64.15
IPR000943RNA polymerase sigma-70PROSITEPS00715SIGMA70_1coord: 132..145
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 181..262
e-value: 2.1E-6
score: 30.1
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 263..337
e-value: 1.2E-7
score: 33.5
NoneNo IPR availableGENE3D1.20.120.1810coord: 43..177
e-value: 1.1E-17
score: 66.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..50
NoneNo IPR availablePANTHERPTHR30603RNA POLYMERASE SIGMA FACTOR RPOcoord: 54..340
NoneNo IPR availablePANTHERPTHR30603:SF45RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTICcoord: 54..340
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..347
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..9
IPR014284RNA polymerase sigma-70 like domainTIGRFAMTIGR02937TIGR02937coord: 95..334
e-value: 1.2E-17
score: 62.0
IPR007627RNA polymerase sigma-70 region 2PFAMPF04542Sigma70_r2coord: 129..177
e-value: 1.3E-8
score: 34.5
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 248..338
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 181..246
IPR013325RNA polymerase sigma factor, region 2SUPERFAMILY88946Sigma2 domain of RNA polymerase sigma factorscoord: 55..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000131_piloncontigtig00000131_pilon:253788..254831 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7046.t1Gchil7046.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000131_pilon 253788..254831 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7046.t1 ID=Gchil7046.t1|Name=Gchil7046.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=348bp
MRPPLPLFVPLALADPSVPRRRTSPSHRPRAPSSRPPLPPEPSHALSANL
PHLHAARKHLRRKSHSEPHSHAVIRHANELNPLPPAHWHLIVGQRNELVI
KWLWLVGAVARKSHQIFISAFPEAEPVISFSDLVQEGVIGLITAVERWDG
SKNQPFDTYAFYTVKYSILRAIQNQARPIRLPVHVLNKLSKIRTVRHQLQ
RAGGNQVSLSEVARLAGVDRKAAQLYLERSQAMLSIDIPVRQSNSGPDAP
PLRDFLVDHSVDVSRQVERQCTREAVAELIRSSPLEELERSVLWLKFGLG
DGVGRLRTEVSRILDVRVHTVKRAELSALKKLREVVSDDISNWAELM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000943RNA_pol_sigma70
IPR036388WH-like_DNA-bd_sf
IPR014284RNA_pol_sigma-70_dom
IPR007627RNA_pol_sigma70_r2
IPR013324RNA_pol_sigma_r3/r4-like
IPR013325RNA_pol_sigma_r2