Gchil7044.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7044.t1
Unique NameGchil7044.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length86
Homology
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BLAST of Gchil7044.t1 vs. uniprot
Match: A0A2V3J8Q2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J8Q2_9FLOR)

HSP 1 Score: 135 bits (341), Expect = 4.740e-40
Identity = 66/85 (77.65%), Postives = 75/85 (88.24%), Query Frame = 0 
Query:    1 MSQSLCCFATCLAGALTMLLFGIALKAHNPFLGFEGDFDEAAASCFKTAFVFLALSGLSLLSFVLGAVRSKMSPPPITRVEYEAV 85
            MSQSLCC ATCLAG+LTM+LFGI+LK HNPFLG+ GDFDEAAA+CFKTAFVF  LS LSL +FV+ AVRSKM+PPPI R+ YEAV
Sbjct:    1 MSQSLCCLATCLAGSLTMVLFGISLKGHNPFLGYTGDFDEAAAACFKTAFVFGGLSALSLGAFVMNAVRSKMAPPPIARLNYEAV 85
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BLAST of Gchil7044.t1 vs. uniprot
Match: M2W0W9_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W0W9_GALSU)

HSP 1 Score: 73.9 bits (180), Expect = 1.630e-15
Identity = 33/66 (50.00%), Postives = 50/66 (75.76%), Query Frame = 0 
Query:    6 CCFATCLAGALTMLLFGIALKAHNPFLGFEGDFDEAAASCFKTAFVFLALSGLSLLSFVLGAVRSK 71
            CCF T + G+LT+L+FG+ L++H PFLGFEGD + AA+SCF  +F+FL  S LS++S+ +G  + +
Sbjct:   10 CCFLTSIMGSLTLLVFGLLLRSHYPFLGFEGDENAAASSCFWASFIFLITSILSIVSYGVGMFQER 75
The following BLAST results are available for this feature:
BLAST of Gchil7044.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J8Q2_9FLOR4.740e-4077.65Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
M2W0W9_GALSU1.630e-1550.00Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 69..85
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000131_piloncontigtig00000131_pilon:251139..251503 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7044.t1Gchil7044.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000131_pilon 251139..251503 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7044.t1 ID=Gchil7044.t1|Name=Gchil7044.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=86bp
MSQSLCCFATCLAGALTMLLFGIALKAHNPFLGFEGDFDEAAASCFKTAF
VFLALSGLSLLSFVLGAVRSKMSPPPITRVEYEAV*
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