Gchil7042.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7042.t1
Unique NameGchil7042.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length141
Homology
BLAST of Gchil7042.t1 vs. uniprot
Match: R7QST3_CHOCR (ADF-H domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QST3_CHOCR)

HSP 1 Score: 155 bits (391), Expect = 5.470e-46
Identity = 73/140 (52.14%), Postives = 102/140 (72.86%), Query Frame = 0
Query:    1 MSSGVAMAQKCVEACSALNKREYGCLVLKMNADFTSIDLEKTLPPLGDDPESAWKDFVKTLPENDARYLVTDFTWKETPTVAKSKVIMITWTPATAPIRSRTVYAASLERVTSKLHVQKTIQTSEADELEYSYLKSQIAK 140
            M+SG+A+A KCVEA  AL+KREYG ++LK+N D + + ++K +PP   D E+ WK+ V  LPEN  RY+++DF+WKETPTV KSK+IMI W+   AP+R RTVYAAS E V +K+ VQK+IQ  E +++ Y  +K  + K
Sbjct:    1 MASGIAIADKCVEAYKALSKREYGSIILKINDDMSEVGVDKCMPPSAGDLETEWKNLVSGLPENGCRYIISDFSWKETPTVTKSKIIMILWSAEYAPVRHRTVYAASKESVATKMAVQKSIQAVELEDIAYLAIKRDVTK 140          
BLAST of Gchil7042.t1 vs. uniprot
Match: A0A2V3J6Q4_9FLOR (Actin-depolymerizing factor 8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6Q4_9FLOR)

HSP 1 Score: 139 bits (351), Expect = 6.520e-40
Identity = 67/140 (47.86%), Postives = 103/140 (73.57%), Query Frame = 0
Query:    1 MSSGVAMAQKCVEACSALNKREYGCLVLKMNADFTSIDLEKTLPPLGDDPESAWKDFVKTLPENDARYLVTDFTWKETPTVAKSKVIMITWTPATAPIRSRTVYAASLERVTSKLHVQKTIQTSEADELEYSYLKSQIAK 140
            M+SG+A++ KC++A +AL K EY  ++LK+      I+LE T      +PE  WKDFVK+LPE+ ARY+++DFT KETPTV+K+K++++ W P  APIRS+ +YAAS+E +T+K+  QK IQ ++ D++EYS +K+ + K
Sbjct:    1 MASGIAVSDKCIDAYTALRKSEYSRVILKITDAADLIELESTHLRSAKEPEEDWKDFVKSLPEDSARYIISDFTVKETPTVSKAKILVLLWNPDGAPIRSKLLYAASVEALTAKVQPQKYIQATDTDDIEYSVVKNALFK 140          
BLAST of Gchil7042.t1 vs. uniprot
Match: A0A1X6P6I6_PORUM (ADF-H domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6I6_PORUM)

HSP 1 Score: 131 bits (329), Expect = 1.510e-36
Identity = 65/142 (45.77%), Postives = 98/142 (69.01%), Query Frame = 0
Query:    1 MSSGVAMAQKCVEACSALNK-REYGCLVLKMNADFTSIDLEKTLPPLGDDPESAWKDFVKTLPENDARYLVTDFTWKETPTVAKSKVIMITWTPATAPIRSRTVYAASLERVTSKL-HVQKTIQTSEADELEYSYLKSQIAK 140
            M+SG+A+  KC++   AL++ R +  ++LK+N D + + ++  LP    D E  WKDFVK LPE+D RY+V DF WK+ PTV KSK+ +I W+P  + +RS+ +YAAS E V SK+  VQ+ +Q +E +ELEY  +K+Q+AK
Sbjct:    1 MASGIAVNDKCIQEYQALSRARTHRAVILKINDDMSEVVVDSILPKSQGDHEGDWKDFVKLLPESDCRYVVVDFEWKDQPTVTKSKICLILWSPEYSRVRSKMIYAASQEAVASKMADVQRQLQATELEELEYGVIKNQVAK 142          
BLAST of Gchil7042.t1 vs. uniprot
Match: A0A7J7II22_9RHOD (Actin-depolymerizing factor n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7II22_9RHOD)

HSP 1 Score: 92.0 bits (227), Expect = 5.420e-21
Identity = 54/147 (36.73%), Postives = 88/147 (59.86%), Query Frame = 0
Query:    1 MSSGVAMAQKCVEACSAL---NKREYGCLVLKMNADFTSIDLEKTLPPLGDDPESA---WKDFVKT--LPENDARYLVTDFTWKETPTVAKSKVIMITWTPATAPIRSRTVYAASLERVTSKLH-VQKTIQTSEADELEYSYLKSQI 138
            M+SGV++   C      L   + R+Y  ++ +++AD  +I +E+ LP        A   WK+F  +  LP ND RY V DF ++   T  K+K+I + W+PA API+S+ VY +S + + S L  VQK +Q ++ +ELEYS+++SQ+
Sbjct:    1 MASGVSVDPACSAELLTLIRASPRQYRAVIYRVSADLRTIVVERVLPSSNITGRGALEDWKEFTSSENLPRNDCRYAVYDFEFETAETGKKNKIIFLLWSPAAAPIKSKMVYTSSRQAIVSALDGVQKEVQATDEEELEYSWVESQV 147          
BLAST of Gchil7042.t1 vs. uniprot
Match: A0A5J4Z6P4_PORPP (Cofilin n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6P4_PORPP)

HSP 1 Score: 91.3 bits (225), Expect = 8.360e-21
Identity = 48/142 (33.80%), Postives = 87/142 (61.27%), Query Frame = 0
Query:    1 MSSGVAMAQKC-VEACSALNKREYGCLVLKMNADFTSIDLEKTLPPLGD--DPESAWKDFVKTLPENDARYLVTDFTWKETPTVAKSKVIMITWTPATAPIRSRTVYAASLERVTSKL-HVQKTIQTSEADELEYSYLKSQI 138
            M+S + + +K   E    ++  +Y  ++ K+  DFTS+++E TLP L D  DP  A+K+ V  LPE+  RY++ DF W+ + T+  SKVI+I W+  T+ +R + +YA+S E + + +  +Q+ +Q ++ DE+ Y  +  +I
Sbjct:    1 MASNINVPEKLKAEFDGLVHGHKYRAVIAKITPDFTSVEVESTLPALQDMVDPGPAYKEMVDMLPEHGCRYILYDFQWQSSATITHSKVILILWSSETSKVREKMIYASSQECILNAVPDIQRQVQATDEDEISYPVVLKRI 142          
BLAST of Gchil7042.t1 vs. uniprot
Match: M1UTX1_CYAM1 (Actin depolymerizing factor n=2 Tax=cellular organisms TaxID=131567 RepID=M1UTX1_CYAM1)

HSP 1 Score: 87.0 bits (214), Expect = 4.830e-19
Identity = 53/151 (35.10%), Postives = 89/151 (58.94%), Query Frame = 0
Query:    1 MSSGVAMAQKC-------VEACSALNKREYGCLVLKMNADFTSIDLEKTLPPLGDDPESA---WKDFV--KTLPENDARYLVTDFTWKETPTVAKSKVIMITWTPATAPIRSRTVYAASLERVTSKLH-VQKTIQTSEADELEYSYLKSQI 138
            M+SGV++   C       + AC     R+Y  ++ +++ D  +I +++ LP       SA   WK+F   K LP +D RY V DF +    T  K+K+I + W+PA+APIRS+ VY +S + + + L  VQK +Q ++ +ELEY++++SQ+
Sbjct:    1 MASGVSVDPACSAELLTLIRACP----RQYRAVIYRVSPDLRTIIVDRVLPSSNITGRSAVEDWKEFTSDKYLPRDDCRYAVYDFEFDTAETGKKNKIIFLLWSPASAPIRSKMVYTSSRQAIVAVLDGVQKEVQATDEEELEYAWVESQV 147          
BLAST of Gchil7042.t1 vs. uniprot
Match: Q7XZ10_GRIJA (Acin depolymerizing factor 2 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ10_GRIJA)

HSP 1 Score: 84.3 bits (207), Expect = 5.400e-18
Identity = 46/121 (38.02%), Postives = 71/121 (58.68%), Query Frame = 0
Query:    1 MSSGVAMAQKCVEACSALNKREYGCLVL---KMNADFTSIDLEKTLPPL--GDDPESAWKDFVKTLPENDARYLVTDFTWKETPTVAKSKVIMITWTPATAPIRSRTVYAASLERVTSKLH 116
            M SGV +    +E  + ++KR  G ++L   K N D   +D  +  PP     DPE  WK  ++ +P+ D RY++ DF  K TPTV++ KV ++ W P TAP RS+ +YAA+ E ++S L+
Sbjct:    1 MVSGVPINPAVIEKYNEISKRTCGAMILSLAKPNNDEVIVD--QAFPPTTPDSDPEDIWKKILEQVPDEDCRYIIVDFKVKTTPTVSQEKVTLVYWAPETAPSRSKMIYAATKEHISSSLN 119          
BLAST of Gchil7042.t1 vs. uniprot
Match: A0A2T7BZ20_9POAL (ADF-H domain-containing protein n=1 Tax=Panicum hallii var. hallii TaxID=1504633 RepID=A0A2T7BZ20_9POAL)

HSP 1 Score: 78.2 bits (191), Expect = 9.270e-16
Identity = 48/135 (35.56%), Postives = 79/135 (58.52%), Query Frame = 0
Query:    3 SGVAMAQKCVEACSAL-NKREYGCLVLKMNADFTSIDLEKTLPPLGDDPESAWKDFVKTLPENDARYLVTDFTWKETPTVAKSKVIMITWTPATAPIRSRTVYAASLERVTSKLH-VQKTIQTSEADELEYSYLK 135
            SGVA+   C+     L +KR +  +V KM+ +F  I +EK       D E++++DF  +LPEND RY + DF +     V KS++  I W+P TA +RS+ +YA+S ++  S L+ +Q  +Q ++A E+    +K
Sbjct:    6 SGVAVNDDCMLKFGELQSKRLHRFIVYKMDDNFKEIIVEKV-----GDRETSYEDFTNSLPENDCRYAIYDFDFVTAEDVQKSRIFYILWSPFTAKVRSKMLYASSNQKFKSGLNGIQVELQATDASEISLDVIK 135          
BLAST of Gchil7042.t1 vs. uniprot
Match: A0A060SZ67_BLAAD (Cofilin n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060SZ67_BLAAD)

HSP 1 Score: 74.7 bits (182), Expect = 2.310e-14
Identity = 49/142 (34.51%), Postives = 81/142 (57.04%), Query Frame = 0
Query:    2 SSGVAMAQKCVEACSALN-KREYGCLVLKMNADFTSIDLEKTLPPLGDDPESAWKDFVKTLPENDARYLVTDFTWKETPTVAK-SKVIMITWTPATAPIRSRTVYAASLERVTSKLH-VQKTIQTSEADELEYSYLKSQIAK 140
            SSGV    +CV+A + L  K++Y  ++ K++ D   I L+      G   ++ +  FV+ LPEND RY V D  ++      K SK+I  +W+P TAP+RS+ VYA+S E +   L+ VQ  +Q ++  E+ Y  +  +++K
Sbjct:    4 SSGVKPNDECVQAFNDLKLKKKYKSIIFKLSDDKKEIVLD------GTSSDADYDQFVEKLPENDCRYAVYDLEYEIGAGEGKRSKIIFFSWSPDTAPVRSKMVYASSKEAIRRALNGVQAEVQGTDFSEVAYEAILEKVSK 139          
BLAST of Gchil7042.t1 vs. uniprot
Match: A0A2G9HZT5_9LAMI (Actin depolymerizing factor n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HZT5_9LAMI)

HSP 1 Score: 70.9 bits (172), Expect = 6.350e-13
Identity = 44/136 (32.35%), Postives = 76/136 (55.88%), Query Frame = 0
Query:    3 SGVAMAQKCVEACSALN-KREYGCLVLKMNADFTSIDLEKTLPPLGDDPESAWKDFVKTLPENDARYLVTDFTWKETPTVAKSKVIMITWTPATAPIRSRTVYAASLERVTSKLH-VQKTIQTSEADELEYSYLKS 136
            SG+A++ +C      L  KR Y  +V K++ +   + +EK     G   E+ ++DF  +LP+ND RY V D+ +       KSK+  I W+P TA +R++ +YA+S +R   +L  +Q  +Q ++  E+ +  LKS
Sbjct:    6 SGIAVSDECKLTFLDLKAKRSYRYIVFKIDDNIQQVTVEKA----GGHGET-YEDFTNSLPDNDCRYAVFDYDFTTDENCHKSKIFFIAWSPDTAKVRTKMLYASSKDRFKRELEGIQVELQATDPSEMSWDILKS 136          
The following BLAST results are available for this feature:
BLAST of Gchil7042.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QST3_CHOCR5.470e-4652.14ADF-H domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3J6Q4_9FLOR6.520e-4047.86Actin-depolymerizing factor 8 n=1 Tax=Gracilariops... [more]
A0A1X6P6I6_PORUM1.510e-3645.77ADF-H domain-containing protein n=1 Tax=Porphyra u... [more]
A0A7J7II22_9RHOD5.420e-2136.73Actin-depolymerizing factor n=1 Tax=Cyanidiococcus... [more]
A0A5J4Z6P4_PORPP8.360e-2133.80Cofilin n=1 Tax=Porphyridium purpureum TaxID=35688... [more]
M1UTX1_CYAM14.830e-1935.10Actin depolymerizing factor n=2 Tax=cellular organ... [more]
Q7XZ10_GRIJA5.400e-1838.02Acin depolymerizing factor 2 n=1 Tax=Griffithsia j... [more]
A0A2T7BZ20_9POAL9.270e-1635.56ADF-H domain-containing protein n=1 Tax=Panicum ha... [more]
A0A060SZ67_BLAAD2.310e-1434.51Cofilin n=1 Tax=Blastobotrys adeninivorans TaxID=4... [more]
A0A2G9HZT5_9LAMI6.350e-1332.35Actin depolymerizing factor n=1 Tax=Handroanthus i... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 9..139
e-value: 5.7E-20
score: 82.4
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 11..136
e-value: 1.4E-22
score: 79.8
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 2..139
score: 23.640564
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 1..140
e-value: 1.0E-31
score: 111.8
NoneNo IPR availablePANTHERPTHR11913:SF12COFILIN/ACTIN-DEPOLYMERIZING FACTOR HOMOLOG-RELATEDcoord: 2..138
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 1..138
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 2..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000131_piloncontigtig00000131_pilon:248886..249404 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7042.t1Gchil7042.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000131_pilon 248886..249404 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7042.t1 ID=Gchil7042.t1|Name=Gchil7042.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=141bp
MSSGVAMAQKCVEACSALNKREYGCLVLKMNADFTSIDLEKTLPPLGDDP
ESAWKDFVKTLPENDARYLVTDFTWKETPTVAKSKVIMITWTPATAPIRS
RTVYAASLERVTSKLHVQKTIQTSEADELEYSYLKSQIAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002108ADF-H
IPR029006ADF-H/Gelsolin-like_dom_sf
IPR017904ADF/Cofilin