Gchil6960.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6960.t1
Unique NameGchil6960.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length335
Homology
BLAST of Gchil6960.t1 vs. uniprot
Match: A0A2V3IY29_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY29_9FLOR)

HSP 1 Score: 271 bits (693), Expect = 1.220e-86
Identity = 157/327 (48.01%), Postives = 207/327 (63.30%), Query Frame = 0
Query:    1 MKVRLEFDVNPAEEARVKPLLHAFIDLVDALNAIDLSTLQANRTDHPDXXXXXXXXXXXXXXXXXXXXXCXXXXASPASPADANASAHFSTETHSTPDSKASVRLRRHKFQPGRRPKSKRRAPPLDSCEAVFDAVGQMRIPVKHAASILQRMMWRSDAPVRDEDIVCAATSELIDPAKVCNHPSRASNIVLTVAAVNDSVLKGFCPRFMAEAAEKLRQPRHTRCNRAQFLGYSEGLAAMVNTHIVSADTALELVHSLLQSGKSSTAAVTTLCRVAEACEQTLDTLVKNPQILKAVKDLLTNVASIPDYSYDIQYLNGATGWDIPLSS 327
            MKVRLEFD++PAE  RV PLL AF D VDALN++DL+      T +PD                          + P    D           +STP        R H+     R + ++R PPLD+C+ +F AV Q R+PVK AAS LQ++M R + PV +  +V AATSEL+DP+KVCNHPSRA+NIV T++A  DS+L+ F   F AEAA +  +PRH  C+RAQFLGYS+GLA MV   +++ADTA++LV +LL+S  S TAAVTTLC++AE CE  L+  V++ + L  VK LL +VA+  +YSYDIQYLNG TGW+IPLS+
Sbjct:    1 MKVRLEFDIDPAEAQRVTPLLDAFKDFVDALNSVDLNKF----TPYPD--------------------------SDPCLNGDT---------PNSTPP-------REHRPPRQTRQRPRKRHPPLDNCDRLFAAVAQARVPVKRAASQLQQLMARPEQPVAEHHVVAAATSELVDPSKVCNHPSRAANIVHTLSACGDSLLQRFSNSFTAEAAHQFSKPRHIHCDRAQFLGYSDGLATMVQQAVITADTAIDLVLNLLRSTPSWTAAVTTLCKLAETCEPPLEARVQDLKKLTCVKHLLVDVANSAEYSYDIQYLNGITGWNIPLSN 281          
BLAST of Gchil6960.t1 vs. uniprot
Match: R7QLJ7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLJ7_CHOCR)

HSP 1 Score: 135 bits (341), Expect = 2.570e-32
Identity = 72/203 (35.47%), Postives = 117/203 (57.64%), Query Frame = 0
Query:  124 PLDSCEAVFDAVGQMRIPVKHAASILQRMMWRSDAPVRDEDIVCAATSELIDPAKVCNHPSRASNIVLTVAAVNDSVLKGFCPRFMAEAAEKLRQPRHTRCNRAQFLGYSEGLAAMVNTHIVSADTALELVHSLLQSGKSSTAAVTTLCRVAEACEQTLDTLVKNPQILKAVKDLLTNVASIPDYSYDIQYLNGATGWDIPLS 326
            P+ S   +F+AV +  I VKHA S LQ M+ R+ +P+ ++ +V AA +E+   A +  HP R  NIV   A++ D  L  F  RF+ +A  +  + R   C+  +FLGYS+GL+A+V+   +S D A++ +  LL      +AA+TTLC++AE     L    ++ + L+ +K  L ++A    ++YDI YLN    W IP++
Sbjct:  317 PITSPRVIFEAVARDGISVKHAVSNLQGMLSRTSSPLSEKTLVSAAVAEMGTTASLAQHPHRGINIVRVFASLGDGYLAAFRNRFVIKATRQFAKKREVGCDVTEFLGYSDGLSALVHEKCISPDAAMKTISRLLLKEGHWSAAITTLCKMAEMSNGELANNCRDREQLRNIKGRLADLAQEKQFAYDISYLNNTLNWSIPVA 519          
BLAST of Gchil6960.t1 vs. uniprot
Match: A0A7S0MDW9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MDW9_9CRYP)

HSP 1 Score: 57.4 bits (137), Expect = 9.930e-6
Identity = 39/140 (27.86%), Postives = 69/140 (49.29%), Query Frame = 0
Query:  175 DPAKVCNHPSRASNIVLTVAAVNDSVLKGFCPRFMAEAAEKLRQPRHTRCNRAQFLGYSEGLAAMVNTHIVSADTALELVHSLLQSGKSSTAAVTTLCRVAEACEQTLDTLVKNPQILKAVKDLLTNVASIPDYSYDIQY 314
            DPAK    PS    ++  +  ++D            +  + L   R   C+RA+ LG++E  A +V   +++ + A   +  L++  ++  AAVTTLC+  E C++ LD L   P  L+ ++  L  V   P + YD+Q+
Sbjct:  164 DPAK---RPSDVEALLRVIMELHDPWRDQARGPLTTKLLKLLTVKRPVDCDRAELLGHAEAFAVLVKFEVIAINAAATTLARLMKKPENRAAAVTTLCKTVEVCDEGLDLL--GPGQLEDLRAALQLVTE-PVFEYDVQF 297          
The following BLAST results are available for this feature:
BLAST of Gchil6960.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IY29_9FLOR1.220e-8648.01Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QLJ7_CHOCR2.570e-3235.47Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0MDW9_9CRYP9.930e-627.86Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.180coord: 146..316
e-value: 2.3E-6
score: 28.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004398_piloncontigtig00004398_pilon:388654..389658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6960.t1Gchil6960.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004398_pilon 388654..389658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6960.t1 ID=Gchil6960.t1|Name=Gchil6960.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=335bp
MKVRLEFDVNPAEEARVKPLLHAFIDLVDALNAIDLSTLQANRTDHPDHT
DLTDHADLTEHSDGTEFTDCNDCTASPASPADANASAHFSTETHSTPDSK
ASVRLRRHKFQPGRRPKSKRRAPPLDSCEAVFDAVGQMRIPVKHAASILQ
RMMWRSDAPVRDEDIVCAATSELIDPAKVCNHPSRASNIVLTVAAVNDSV
LKGFCPRFMAEAAEKLRQPRHTRCNRAQFLGYSEGLAAMVNTHIVSADTA
LELVHSLLQSGKSSTAAVTTLCRVAEACEQTLDTLVKNPQILKAVKDLLT
NVASIPDYSYDIQYLNGATGWDIPLSSAESAKHV*
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