Gchil6956.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6956.t1
Unique NameGchil6956.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length336
Homology
The following BLAST results are available for this feature:
BLAST of Gchil6956.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 136..335
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..115
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..110
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004398_piloncontigtig00004398_pilon:307337..308344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6956.t1Gchil6956.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004398_pilon 307337..308344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6956.t1 ID=Gchil6956.t1|Name=Gchil6956.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=336bp
MVATFTPLPVFLLLACVRSGAVLVHSAQPIPPDLSHNCEQQITPSKTITQ
LLSVAVAVPVLCCIVAQFFRRLSHRYPAKLSLLYAQIFCLLLLYHTTLLL
GLPIWIYGVASENLEVAFAGAGMVAAVFLATYSSWNTPTRLRHLWHYIPT
PTCLSEPARKELPSAIASLLNMAMDDTSSPRVSFNTKCMLKFLLLKFGTL
PHERQLASLGFTTNQFLLYPQSVFTMMNSIPSFRNAYGCDECVWMRTWAV
PLLRRLRGRVSHATNPINEAIEEFQVYYVLWFAVFVLNSIKHGGGDQFRS
FSYFMAQPVEATARSMTFGGANRVELFDRHHSGTL*
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