Gchil6937.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6937.t1
Unique NameGchil6937.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length472
Homology
BLAST of Gchil6937.t1 vs. uniprot
Match: A0A2V3IT31_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT31_9FLOR)

HSP 1 Score: 184 bits (468), Expect = 3.770e-49
Identity = 167/469 (35.61%), Postives = 241/469 (51.39%), Query Frame = 0
Query:    9 EHEELLTVKDYRPSLRSSSSSDISRSSDEEFSYEVEKPCPFAGIPRKSKLGKMYLTRYRRGLWEERPIITTVETPFKLRFWTIMGPNEVYDDDEGQG-VGTGETLIIPTTGLGPFCFQPQGLHLAPRPKGSVGKMSPLQRSYMKRAPPPRS-EHPNQYHGVSLSCARPPALGVTEMLNTDARCVEEPCGLSDSSSNSDSHNSLTYFPSLSSSNSTSKINFCLDSNTDDDSCGEDTQPNF--QLARKGEAAFSNLSNRQNLKLRQSGKDADAKLLQSSTASLTQTQAHIQSLTNRVEQLMSLANSLQDKLTCCDKENTQLQHQVQAWQTLQSSSEECTFTKSSADQSFP--VADS-GEELERKRPSLRTNLFATEEERLRMELMEQGQKTAEVLLENEMLLGVILKLKCELDLEHTMYEKL-QNAIALQPA----GMWQRLKRLVISPNGSTDSKKN---QRGWLFARSK 462
            E + LL+V DYRPS    +S +     DE        P PFA +P ++  G  + TRY +G+W E+P IT + +P  LR WTI GP+E  DDDE Q  V   + +++ T  +     Q + L+  P P  SVGK+SPLQ+  +  A P +   H     G  LS +R   + V+ M+NT  R V +P  LS+SS ++  H + + +  LS  +S S INF LDS++DD     D   +    L  K  A  S            + +D    L   S     Q QA I +LT RVEQL++L   LQ +L+ C K+   ++ Q+ A +  ++S           +QS P   +DS  EE   +R S++    A E++R+RMELME+ Q+TAE+  ENE LLGVILKLK ELD EH     L +     +P+    G  +    L  S + S D+KK    +R W+F R+K
Sbjct:   39 EQQPLLSVTDYRPSANYVTSDE---EDDEHHPPAQPAPNPFANLPCETVYGAPHSTRYSKGIWTEKPRITHLHSPQPLRLWTINGPDESRDDDEEQQIVYMDDNVLVYTKNIQMLRAQWEILNQRPGPPASVGKLSPLQKFQISVAHPVKPFNHAVIPLGNPLSLSRSCVVSVSGMINTHGRTVPDPPALSESSHST--HQTDSPYEQLSDEHS-SVINFRLDSSSDDHHSESDLSDSNIPSLPAKAPAPTS-----------PAHRDLGGPLHVPSP----QAQAQIDNLTARVEQLLALNTHLQQQLSDCRKDKANVEQQLSAAKATENS-----------NQSAPPRTSDSPSEERSPRRASMKKRRNAREDDRIRMELMEEKQRTAEMQSENERLLGVILKLKRELDGEHERNMALYETRFGAEPSVLDKGKQKAKSLLQRSRSASKDAKKKVEQRRRWIFGRTK 475          
The following BLAST results are available for this feature:
BLAST of Gchil6937.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IT31_9FLOR3.770e-4935.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 285..312

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004398_piloncontigtig00004398_pilon:141027..142442 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6937.t1Gchil6937.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004398_pilon 141027..142442 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6937.t1 ID=Gchil6937.t1|Name=Gchil6937.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=472bp
MSSADFQCEHEELLTVKDYRPSLRSSSSSDISRSSDEEFSYEVEKPCPFA
GIPRKSKLGKMYLTRYRRGLWEERPIITTVETPFKLRFWTIMGPNEVYDD
DEGQGVGTGETLIIPTTGLGPFCFQPQGLHLAPRPKGSVGKMSPLQRSYM
KRAPPPRSEHPNQYHGVSLSCARPPALGVTEMLNTDARCVEEPCGLSDSS
SNSDSHNSLTYFPSLSSSNSTSKINFCLDSNTDDDSCGEDTQPNFQLARK
GEAAFSNLSNRQNLKLRQSGKDADAKLLQSSTASLTQTQAHIQSLTNRVE
QLMSLANSLQDKLTCCDKENTQLQHQVQAWQTLQSSSEECTFTKSSADQS
FPVADSGEELERKRPSLRTNLFATEEERLRMELMEQGQKTAEVLLENEML
LGVILKLKCELDLEHTMYEKLQNAIALQPAGMWQRLKRLVISPNGSTDSK
KNQRGWLFARSKSRKLERIGS*
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