Gchil6934.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6934.t1
Unique NameGchil6934.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length493
Homology
BLAST of Gchil6934.t1 vs. uniprot
Match: A0A2V3IY08_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY08_9FLOR)

HSP 1 Score: 328 bits (842), Expect = 4.320e-96
Identity = 192/543 (35.36%), Postives = 276/543 (50.83%), Query Frame = 0
Query:    4 WVSGRRSLKLLQIHRHIGDLPLVIPQKHGEQRRRDAYWGKRSKIVQTEETALYGLEFYQPIMFPWIHLVNDREIKESFESLLSFCSGVAAMEVCNEQSLNLEIFLHGGCFSLPLDCFRKPVMDILPELSERSRSCSTPRSGEVFLTISLD----------------------------------------------EEFNGISRRLNLVRKKDAVHVRRTAVLHLPMGNRLTFTELDVSHCEADTRFVCAYNQFEASVLCIEGCNIGEDRKLKTGDG--------IECTMIVLSKNTYATLISGLSDILEGNGLLHVLGDNIVNIDVMRRIFKNVGLEMTFLAVVYVIAGCDFTARTSGVSHLHYVNAAVKPQKWVGLTTPGRLIEVCELLALFTYLGKHGKYEMNTCAQHDILRAKWARDAVPSNEISWRAKRMFISEHAVGADEWKRDLRRFVADNLKSVAADLIPPKEHIELQARRVMYIVSKYWKEAWSLDLSPDRTEGCKEKLGFNKDGEIILEKLFEVELLQQKMRRVLIPCKCKGN 492
            W SG R  +L Q+H H+ D  +VIPQKHGEQ RRDA         +     L  + F  PI  PW  + + R  +++  S+  FC  VAAME+  E S+++ +FL+GGCF     C  K   D+LPEL+ R+   S PR GEVF+ +  D                                                 N +  R N   + D + V RTAVL +  G  L  + + + H EA+TRFV A+  F + +L  E     E    K  DG        + C  IVLSK+T  T+I  L++ + G G+LHVLG++++ ID + R     G   + LA VY +AGCDFT  + GV H H+++AAV+ +  +G           EL  L  YL K G  ++ T A+ D    KW  ++  + EI  R + +F S H VG++EW  D RR + D  +SVA +LI PK+HI LQA R  ++V  YW +A   DLSPD  +GC E  GF+  G ++LE+  +V++L ++M  ++  CKCKGN
Sbjct: 1439 WFSGSRGKQLRQLHLHVDDPSIVIPQKHGEQARRDATRSMDENTARNGSDELNSIGFLLPITVPWGTITSSRRSRDAVSSVHLFCGAVAAMELAEESSIDVSVFLYGGCFCFKSSCVGKGFEDLLPELALRTDIGSFPRDGEVFIGLKEDLLSIGCSNGEGAPGQAVSSDSSQATTANNGPTVLPSGVSHPDMAGYNPRNELGERRNQTEEDDLLRVPRTAVLMVSNGGGLQISGVCIKHGEAETRFVAAFKHFVSPLLSEES----EKDVFKYNDGHHSPLPSHLRCASIVLSKDTDVTMILCLAERMHGRGVLHVLGEHVIEIDTLVRNLSLNGSNQSTLACVYTLAGCDFTPGSYGVRHSHFLSAAVRQRVMLGHLESNSDPTAFELATLLAYLEKKGYRKLLTLAEKDDAMQKWNTESCDAAEIRRRTRTIFASPHVVGSEEWVLDARRHIYDGARSVA-ELIAPKQHIHLQASRSKFVVFTYWSQAHWDDLSPDVLKGCDESNGFDVSGSVLLEREDDVKILSKQMNELVARCKCKGN 1976          
BLAST of Gchil6934.t1 vs. uniprot
Match: A0A2V3IM72_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM72_9FLOR)

HSP 1 Score: 137 bits (344), Expect = 1.980e-32
Identity = 89/302 (29.47%), Postives = 143/302 (47.35%), Query Frame = 0
Query:    4 WVSGRRSLKLLQIHRHIGDLPLVIPQKHGEQRRRDAYWGKRSKIVQTEETALYGLEFYQPIMFPWIHLVNDREIKESFESLLSFCSGVAAMEVCNEQSLNLEIFLHGGCFSLPLDCFRKPVMDILPELSERSRSCSTPRSGEVFLTISLDEEFNGISRRLNLVR----KKDAVHVRRTAVLHLPMGNRLTFTELDVSHCEADTRFVCAYNQFEASVLCIEGCNIGEDRKLKTGDGIECTMIVLSKNTYATLISGLSDILEGNGLLHVLGDNIVNIDVMRRIFKNVGLEMTFLAVVYVIAGCD 301
            W  GR S +L QIH HI D    + QK  EQ RRD       +  Q  +  L    F  P+  PW +L+     ++S  SL  FC  VA  E+  E   +++I +HGGCFS   +C  K   ++  EL+ +      PR GEV L        NG   +  +V     ++D + V R   +     + L  +E+ V+H E++T FV  +  F   +L ++  +  E   +K     + + +++S +T  T+I  L+  +    ++H+L D +++ID + R     GL    LA  YV+AG D
Sbjct:   75 WFMGRSSEELRQIHLHIDDPTCTMNQKQNEQERRDHVRDMNMETKQRADEELKRSGFPLPLETPWGNLMRSSSCRDSIASLHLFCGAVAGTELAREFERDVDILIHGGCFSFSPECISKEATELTCELATKYERFPIPRDGEVVLRAKAR---NGFEMQNKVVSSDDSERDFISVPRERSMVFGKRSGLRLSEVCVTHGESETWFVATFKHFVIPLL-VDDEHGNEATHIK-----KASCLIVSMDTDVTVILTLAHFMRDRNVIHLLRDCVIDIDALCRRMMGYGLSTKMLACTYVLAGRD 367          
BLAST of Gchil6934.t1 vs. uniprot
Match: A0A2V3J2H0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2H0_9FLOR)

HSP 1 Score: 122 bits (305), Expect = 8.290e-28
Identity = 82/259 (31.66%), Postives = 133/259 (51.35%), Query Frame = 0
Query:  197 HCEADTRFVCAYNQFEASVLCIEGCNIGEDRKLKTGDGIECTMIVLSKNTYATLISGLSDILEGNGLLHVLGDNIVNIDVMRRIFKNVGLEMTFLAVVYVIAGCDFTARTSGVSHLHYVNAAVKPQKWVGLTTPGRLIEVCELLALFTYLGKHGKYEMNTCAQHDILRAKWARDAVPSNEISWRAKRMFISEHAVGADEWKRDLRRFVADNLKSVAADLIPPKEHIELQARRVMYIVSKYWKEAWSLDLSPDRTEGCKE 455
            H E +TRF+ +++ F   +L   G +  E+ +++ G+ +    IVLSK+T   +I  +++ + G G +H+L +N++ +D ++       +++  LA VYV+AG DFTA T GV+H HY+ AA+       L      +    +L L TYL KHG   +    + +             NEI    KRMF S++     EW  +++RF+ D   + A +L+P  EHI LQ RRVM +V +    A      P+   GC E
Sbjct:   18 HGELETRFLSSFHTFVVPMLRQNGWHKNENGEVQ-GE-LPTASIVLSKDTEVNMILLVAEFMRGQGDIHILLENVMEVDTLKTNLMRGSVDIKTLASVYVLAGSDFTAGTCGVTHEHYLRAAMHHIHLGALINEDSPLSF-HVLTLLTYLEKHGITNLVIIVEKESFCRIPTYAGWDGNEIGKGLKRMFASDNVRRTTEWCLEVQRFITDGA-NFATELLPACEHIRLQGRRVMLVVFQCSCRAERERFCPETVNGCDE 272          
BLAST of Gchil6934.t1 vs. uniprot
Match: A0A2V3ITV6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITV6_9FLOR)

HSP 1 Score: 119 bits (299), Expect = 3.820e-26
Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 0
Query:    3 LWVSGRRSLKLLQIHRHIGDLPLVIPQKHGEQRRRDAYWGKRSKIVQTEETALYGLEFYQPIMFPWIHLVNDREIKESFESLLSFCSGVAAMEVCNEQSLNLEIFLHGGCFSLPLDCFRKPVMDILPELSERSRSCSTPRSGEVFLT 149
            LW +GRR   L Q H HI D   VI  KHGEQ RRD        + +T    L+ + F QPI+ PW  L+    I+++  SL   CSG+A ME+  E S+ +++FL+GGCF +P +C    + D++ +L  ++ SC  PR GEV +T
Sbjct:  207 LWSTGRRRKYLRQRHVHIDDPRRVILGKHGEQARRDFLRRIEVVVKKTGGQKLHRIGFRQPIVVPWAILIRSISIRDAICSLHLLCSGLATMELAEENSIQVDLFLYGGCFCIPSNCLGINLGDLVIQLKMKASSCEQPRQGEVLIT 353          
The following BLAST results are available for this feature:
BLAST of Gchil6934.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IY08_9FLOR4.320e-9635.36Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IM72_9FLOR1.980e-3229.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J2H0_9FLOR8.290e-2831.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITV6_9FLOR3.820e-2640.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004398_piloncontigtig00004398_pilon:62145..63623 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6934.t1Gchil6934.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004398_pilon 62145..63623 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6934.t1 ID=Gchil6934.t1|Name=Gchil6934.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=493bp
MGLWVSGRRSLKLLQIHRHIGDLPLVIPQKHGEQRRRDAYWGKRSKIVQT
EETALYGLEFYQPIMFPWIHLVNDREIKESFESLLSFCSGVAAMEVCNEQ
SLNLEIFLHGGCFSLPLDCFRKPVMDILPELSERSRSCSTPRSGEVFLTI
SLDEEFNGISRRLNLVRKKDAVHVRRTAVLHLPMGNRLTFTELDVSHCEA
DTRFVCAYNQFEASVLCIEGCNIGEDRKLKTGDGIECTMIVLSKNTYATL
ISGLSDILEGNGLLHVLGDNIVNIDVMRRIFKNVGLEMTFLAVVYVIAGC
DFTARTSGVSHLHYVNAAVKPQKWVGLTTPGRLIEVCELLALFTYLGKHG
KYEMNTCAQHDILRAKWARDAVPSNEISWRAKRMFISEHAVGADEWKRDL
RRFVADNLKSVAADLIPPKEHIELQARRVMYIVSKYWKEAWSLDLSPDRT
EGCKEKLGFNKDGEIILEKLFEVELLQQKMRRVLIPCKCKGN*
back to top