Gchil6926.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6926.t1
Unique NameGchil6926.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length488
Homology
BLAST of Gchil6926.t1 vs. uniprot
Match: A0A2V3IMN5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMN5_9FLOR)

HSP 1 Score: 523 bits (1346), Expect = 3.460e-180
Identity = 262/445 (58.88%), Postives = 335/445 (75.28%), Query Frame = 0
Query:    1 MVTVGVLNALINIAVLIVIALVDRAVELILRNLASNRLSTHRRAPLVHDSDTWLPYLPRSVIKYHRHPAILLVVIFTILLVPAELVTELGIDVSSTCMPRRQTGPVIRPGDATDNYTTVELGGMAFFLQSTAFPDRPFTRVQAGFPRTITGRECIKCLNDK--PSIIEGCHVQLERTYEPGQLEVAFQTTKGSFKTVTAWFKETKPNGISYHLR---GDVTRNGQYWAATMFDRKPNTTKDVLYLEYTDQKHIDHLFRSTVQHKPNLILERTHSNVRMYSISCSTNHISRPRFIKALMVYRTIQLENPVKPASYEPQYNRFAEITEESVYISVLTLKIVDDDYDTGDFYRYSSCGKYNIIFLVPLFLCVCAIIVLGFMSLYFRSDPHIRRKIPYSSKSWLSHVKRKQKHDQIPAAP---PTLRTHPTLSIDSITDEMILVEEGRG 437
            M+TVGVL ALIN+AVLI+I   DRA+ELILRN ASNRL++HRRAP+VHDSDTWLPYLPRSV+KYHRHPAIL VVIFTILLVPAEL+TELG+DVS  C P ++ GPVI   +AT N+T++ELGGMAFFLQST+F + PFTR+QAG PR ITG ECI CL     P II GC VQL+R Y+ G+L V  QTT G FKT+T  F ETKPNG++Y      GD+TRNG++WA+ MF  +PN   +VLYLEYT+Q+HI  LF   V     L+ E T S+VRMY+ISCSTN +S   FI+ALMVYRTIQLENPV+PA Y+ + +RF EI  ESVY+SVL+LKIVDD+++ GD+YRY++CGKY ++F+ PL +C+  I++LG +S+ FR+D  +R +IPYSS++W  HV+++   D  P        +R +P        DEM+++EE +G
Sbjct:    1 MITVGVLAALINVAVLILITFTDRAIELILRNFASNRLASHRRAPIVHDSDTWLPYLPRSVVKYHRHPAILCVVIFTILLVPAELITELGVDVSERCSPMKERGPVIAKNNATPNFTSIELGGMAFFLQSTSFAEAPFTRIQAGIPRMITGMECISCLKGSQYPDIISGCTVQLDRVYQAGELRVTIQTTLGPFKTITTSFNETKPNGVAYSRSKGMGDLTRNGEHWASHMFHPRPNRENEVLYLEYTNQEHIGSLFEKAVNSSQALVTEPTGSSVRMYAISCSTNKLSPDHFIEALMVYRTIQLENPVRPAQYQEKEDRFMEINPESVYLSVLSLKIVDDEHEIGDYYRYTTCGKYKMVFIAPLLICITVIVILGIVSVCFRADRRLRNRIPYSSRTWFQHVRKQGSTDCDPIEEGRMTCIRHNP--------DEMVVLEEYQG 437          
BLAST of Gchil6926.t1 vs. uniprot
Match: A0A2V3IMN6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMN6_9FLOR)

HSP 1 Score: 337 bits (864), Expect = 1.170e-107
Identity = 185/438 (42.24%), Postives = 266/438 (60.73%), Query Frame = 0
Query:    1 MVTVGVLNALINIAVLIVIALVDRAVELILRNLASNRLSTHRRAPLVHDSDTWLPYLPRSVIKYHRHPAILLVVIFTILLVPAELVTELGIDVSSTCMPRRQTGPVIRPGDATDNYTTVELGGMAFFLQSTAFPDRPFTRVQAGFPRTITGRECIKCLNDKPSIIEGCHVQLERTYEPGQLEVAFQTTKGSFKTVTAWFKETKPNGISYHLRGDVTRNGQYWAATMFDRKPNTTKDVLYLEYTDQKHIDHLFRSTVQHKPNLILERTHSNVRMYSISCSTNHISRPRFIKALMVYRTIQLENPVKPASYEPQYNRFAEITEESVYISVLTLKIVDDDYDT-GDFYRYSSCGKYNIIFLVPLFLCVCAIIVLGFMSLYFRSDPHIRRKIPYSSKSWLSHVKRKQKHDQIPAAPPTLRTHPTLSIDSITDEMILVEEGRG 437
            MV VG L ALIN+A+L+V+A+ DRA+ELI+RN A++RL +H + P+VHDSDTWLP+LPRSV+KY RHPAIL  V+    L+ +ELVTELG+DVS+TC P    G VI  G  ++N+T +EL G  F L+S  F +     ++AG PR +TG EC+KC ++   II GC VQ +R + P Q+E+   +T G+FKT+T  FKET  +G  Y  +GD+T NG  ++  M          +LY EY DQ HI HL       K     ERT  NV M  I+C TN ++   F + + +YRT+QLENP+ PA +    + +  +T +S+Y +VL  K++DD +     +Y Y+SCGKYN  F++P+ +C+  I++LG +S     +      IP++S++W  H +            PT    P     ++ DE+ LVEEG G
Sbjct:    1 MVGVGGLAALINVAILLVVAVADRAIELIVRNFATSRLLSHGKVPVVHDSDTWLPFLPRSVVKYRRHPAILCTVLXXXXLITSELVTELGVDVSNTCSPELHRGAVIAKGPTSENFTDIELSGTCFLLRSMEFAEGSLKCLRAGIPRKLTGNECLKCAHEDSEIISGCDVQYKRKFLPEQVEIEVNSTDGTFKTLTTLFKETS-SGAVYDGKGDLTFNGDTFSTFMIHYSEEGP--LLYFEYNDQDHIRHLKDIANAQKGEPARERTKGNVHMSEINCKTNVLTNEVFARFVRMYRTVQLENPIFPAKFNDTADLYEPLTPDSLYRAVLAAKVIDDKHTPDATYYVYTSCGKYNWNFMLPMLVCLGVILILGLVSCMI-GERMGETYIPFNSRTWYEHAQDLDDPLTPYVGAPTESRKPKGYFANLFDEIQLVEEGEG 434          
BLAST of Gchil6926.t1 vs. uniprot
Match: A0A2V3IPN6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPN6_9FLOR)

HSP 1 Score: 333 bits (853), Expect = 5.090e-106
Identity = 193/450 (42.89%), Postives = 271/450 (60.22%), Query Frame = 0
Query:    1 MVTVGVLNALINIAVLIVIALVDRAVELILRNLASNRLSTHRRAPLVHDSDTWLPYLPRSVIKYHRHPAILLVVIFTILLVPAELVTELGIDVSSTCMPRRQTGPVIRPGDATDNYTTVELGGMAFFLQSTAFPDRPFTRVQAGFPRTITGRECIKCLNDKPS-IIEGCHVQLERTYEPGQLEVAFQTTKGSFKTVTAWF--KETKPNGISYHLRGDVTRNGQYWAATMFDRKPNTTKDVLYLEYTDQKHIDHLFRSTVQHKPNLILERTHSNVRMYSISCSTNHISRPRFIKALMVYRTIQLENPVKPASYEPQYNRFAEITEESVYISVLTLKIVDDDYD-TGDFYRYSSCGKYNIIFLVPLFLCVCAIIVLGFMSLYFRSDPHIRRKIPYSSKSWLSHVKRKQKHDQIPAAPPTLRTHPTLSIDSITDEMILVEEGRGLFSGQTVSI 446
            MVTVGVL ALIN+ VLIV++  DRA+E I+RN A+ RL +HRRAP++HDSDTWLP+LPRSV+K+H++PAIL  +  TILL+ +E V+ELGIDV+  C P+ + G VI P D T N+T +EL G  F +QS  F +    RVQ G P  + G EC  CL    S II GC V+  + Y P  L V+ +TT+G FKTVT  F   E+K     Y   GD+T NG+  +  +F       K + YLEY DQ HI  L   + +  PN + E T+S VR Y I C TN +S   F + + +YRT+QLENP+ PA +      F  ++ E +Y + L  KI+DD +D  G +Y Y+SCG+YN IFL+P+ + + A+ VL   S  FR        +PY+S+SW  H +  Q+  +  A    ++++  L      DE++L+E G G  +   ++I
Sbjct:    1 MVTVGVLAALINVGVLIVVSFADRAIEHIVRNFATCRLRSHRRAPVIHDSDTWLPFLPRSVVKFHKYPAILCTLFITILLITSEFVSELGIDVNKKCKPQPRKGSVISPDDITHNFTDIELSGSCFVVQSVEFVEGQLKRVQPGIPTELKGSECFSCLQTSHSDIISGCSVRQIQEYAPRTLHVSVKTTRGIFKTVTKSFLHMESKTPFTGY---GDLTFNGENLSCFLFQHIHG--KSLNYLEYDDQAHIRSLKDKSEKQYPNEVSEPTNSVVRKYRIRCKTNQLSAANFAEVVRMYRTVQLENPITPAMFNHTSGSFPPMSNEDIYRATLAAKIIDDQHDPNGTYYIYTSCGEYNWIFLLPMIISLLALGVLFSASRVFRPASPQSFPVPYNSRSWFHHAQELQEMHRSRAREEVVQSN--LRSSEGFDEVMLIEGGIGARNEYRIAI 443          
The following BLAST results are available for this feature:
BLAST of Gchil6926.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IMN5_9FLOR3.460e-18058.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMN6_9FLOR1.170e-10742.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IPN6_9FLOR5.090e-10642.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 92..353
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 354..377
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 378..487
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..91
NoneNo IPR availableTMHMMTMhelixcoord: 69..91
NoneNo IPR availableTMHMMTMhelixcoord: 4..22
NoneNo IPR availableTMHMMTMhelixcoord: 355..377

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:726278..727741 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6926.t1Gchil6926.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 726278..727741 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6926.t1 ID=Gchil6926.t1|Name=Gchil6926.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=488bp
MVTVGVLNALINIAVLIVIALVDRAVELILRNLASNRLSTHRRAPLVHDS
DTWLPYLPRSVIKYHRHPAILLVVIFTILLVPAELVTELGIDVSSTCMPR
RQTGPVIRPGDATDNYTTVELGGMAFFLQSTAFPDRPFTRVQAGFPRTIT
GRECIKCLNDKPSIIEGCHVQLERTYEPGQLEVAFQTTKGSFKTVTAWFK
ETKPNGISYHLRGDVTRNGQYWAATMFDRKPNTTKDVLYLEYTDQKHIDH
LFRSTVQHKPNLILERTHSNVRMYSISCSTNHISRPRFIKALMVYRTIQL
ENPVKPASYEPQYNRFAEITEESVYISVLTLKIVDDDYDTGDFYRYSSCG
KYNIIFLVPLFLCVCAIIVLGFMSLYFRSDPHIRRKIPYSSKSWLSHVKR
KQKHDQIPAAPPTLRTHPTLSIDSITDEMILVEEGRGLFSGQTVSIQYPL
ADLESFEQSRDDIPPEMEPFEAYHSSYFPPPDIFPPR*
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