Gchil6905.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6905.t1
Unique NameGchil6905.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length148
Homology
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BLAST of Gchil6905.t1 vs. uniprot
Match: A0A150H4L1_GONPE (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H4L1_GONPE)

HSP 1 Score: 55.5 bits (132), Expect = 3.680e-6
Identity = 29/71 (40.85%), Postives = 45/71 (63.38%), Query Frame = 0 
Query:   11 DEEGRVLMVELPCIFVVCAHAMHSMSAAHPRLDMRLS-WDRALRKHVRNMRARGKPLLLLGNLASSSRRVE 80
            + EGRV+ VELP +FVVCA+  +S      RLD R+  WD A   ++  + ARGKP++L G+L  + + ++
Sbjct:  246 EAEGRVVTVELPDLFVVCAYVPNS-GEGLKRLDYRIKRWDGAFAAYITGLEARGKPVVLTGDLNCAHKEID 315
The following BLAST results are available for this feature:
BLAST of Gchil6905.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A150H4L1_GONPE3.680e-640.85DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 1..144
e-value: 9.5E-17
score: 63.4
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 5..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:652405..652848 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6905.t1Gchil6905.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 652405..652848 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6905.t1 ID=Gchil6905.t1|Name=Gchil6905.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=148bp
MQRRIAHDVGDEEGRVLMVELPCIFVVCAHAMHSMSAAHPRLDMRLSWDR
ALRKHVRNMRARGKPLLLLGNLASSSRRVERAVDTSFQDLLETCDLVDTC
QHGRPDCVQCALASRDMVRAVRRVDVLDRVHGASHCPLLIHLTDGIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf