Gchil690.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil690.t1
Unique NameGchil690.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1664
Homology
BLAST of Gchil690.t1 vs. uniprot
Match: A0A2V3IMB7_9FLOR (Histone-lysine N-methyltransferase 2D n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMB7_9FLOR)

HSP 1 Score: 417 bits (1071), Expect = 4.340e-116
Identity = 548/1827 (29.99%), Postives = 792/1827 (43.35%), Query Frame = 0
Query:    1 MPRGRSARATRTSRLPEIFEMDGHLLESYNHIDDLPRLSDEPKKRPRHVTRGSVAAERKAAAAAVRTSPVPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQLS-------KVCCRVCLRSYSATKIIRCLVCRKGVHTFCLNPPLIDLPSFGSWKCQKCKRRAITLKREKRSILRDALVTYPSLCTNSLVEKIIDAAASIDAAAIKSKLTFPLTSNDVDVTETQAETPANDCASTATVIPVTDLDPNDLNQQSYFTTPD-QTVQAVIPLSRAGHSRDPLTASSIPLSNINSVIIRVPKKLLLEEIEL--PIHP-----------------RESPGYSKGSRHAVSDHQTGLKR--AKRAGAPHRSQVPPVPKKRK-------LHPNVDGNAVPQALTNGAKSWETESLKQPPLSKRSQSQAHQSAEL-----------LPGSSAFAQSSTRSSQCPVKRPPPSGSD-------------GTDSKPCLPPLQRN---------RLPLQKRYKYDVAQSVMGSAGQSPRKEKQASDELLSSPAQPKTA--GVFPIP------------RLDEVRSTI-VAPLEK-----------STASDD-----------ERTPWLIPQCSSNVQVSKTGS-------SILSSQTQRMTRNQRGFVAQERKPNSSH------------------------------------SVSLSGKDSKIARAEISREKKSSKHVPLVLSFQRHAGPYAKAYFNCPQSLAPVTKLVSPAMPNLVKVELDGNNVLGEHDEDSHHVDEVAPKSDDDINLAGLAGSALSLRTGHNNAAQPDRAKFPRTPVPAWKERTKTSDSANPAHMPASQDRRVLFGNSPLLNVDLGHTGVLSSSDNNGEESSSLAVRPGPESAKTSEPLISKMKLKVNG--DNPISWTGPCAGLQGFST-KCPQKFIK---------PTSGDFF-APHCDGGFWDYTRTMDPAPGTVSSKKTVC--------------KHASNAAAMVRDTELDPRNPPQERGTLVGHSSLTELPRLRSEKLESKACGQATQT------VKTVKKIPETTGENIVSSKLGTVSSRY-----------STEPQD--IANIQKAVNQSATPQNNSGNQTNAASICVKDLQWEAKREALMAFAQVQRQLAVSQGRRKLQTGNPSGEVNTLRQDSSQVERNISRNKNVPETERHRMEVTALATSSRYRSSKHELGAVRTVKKGSISSLLHSSSELPPS-GRRTFNSNEHINRSDRTPLHQ---FPWSTNYDSGSNFELLRMSADARSTDRHGGESQKRGISTSQQPIYDRRQDYMYRPNTASLELHDRHLPGTSPVLPQQKAHLTPYLLEGRMNQVYESRSANEHVQQRPLGS-DSFSQRARQRSSVR-YGMRDQ-------HIQCLTLNPMDESKKSSQGRAEPP-------LPSASNLHSHQPEHCAPNNCRVFRDVPNHVR-LAPVSFLSNRDKTGSSKTAAP-VLEPMEMPPFGRPGDPIRYNDPPPLQYRKAATPSPI----PHDRPRLASDPNQNM--KRVYMSTKVSNAEGVSGHLDQRQIAQTRQT----------FAQNDYATPTASGNEVRASDCAIGFLNVDPSKERTMMMNAPCMENLPRRHAKSYEESETRRTQYEQKKALAFVGVSQERHGLNTGLF-DLSLRPEESMLNRT-PSLQMQHTPNFSNLPEPGDAFRGPRLKETLPGLDYSDDYHVRPS-GTQRSGSIRNNDALGSTIDKVSRLGALPDAGMSLSKQIRALVSSNTRKASATSEAPN 1591
            MPR R ARATR+SRLPE FEM GHL+ESY+HIDDLPRLS EPKKRPRHVTRG+VAAERKAAA          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      S        V CRVCL+S +A KI+RC +CRKG+HTFCLNPP++DLP+  SWKC KCKR AI LK+EKR ILRDAL TY +LCT+  V+K+IDAA S+DAA I   L  P        + T   +P+   A T      T+LD N+   Q+  +    QT++AVIP+     S      S+IP+ N N++I+RVPK L+L+E++   P+ P                 R     SK ++H++S     +++  A +     R      PKKRK         P +     P  + NG K     S  +PPLS    + A Q+              +P SS+ ++S+ +  Q P  R   S  D             GT+  P      +           LP+ KRY  D ++++      +   E+  +D    +   PK A   V P P            RL ++  ++ +AP ++           S+ S D           E+    + + S+   +S T S       SI    T R   N+      E    S+H                                    S+S++ ++  ++R +    +   ++ P + + Q      A    +     A      +PA  +   V +           D H +    P   D +N+     +     TG     +P +++      P+ + R   +    P     +     +  N   + V         SS  N E SS    R     +       +    +VN    N  S   P +     S  +   +F++         PTS D   +P       +   T   + G   ++  +               ++      +   +  +PR P   + + V  S+    PR R +  ++ A      T      V    K+P T   +   ++L   ++R             + P D  + N  ++ +Q   P N S  +   A + VK+LQW+AKREAL+AFAQVQR LA          GN    V     + SQ+ R++SRN+NVPETER RME T LA SSR R S        + +KGSISSLLH + E+PP       NS  H +    T   Q      + NY+  S     R S++ R  D      QKR   T  +  YD  +D ++   +         L G +      K   + + L+ R +       +  H   RP G   SFS+  R++   + YG+            +  T N     +   Q R  P        LPSASNL   +PE+   +  R + +  + VR LAPV+F      + +    +P  +EPMEMPPFGRPGDPIRYND P  +YR A+ PSP     P D+ R+  D    +   RV    +      V+ +  QR +A    T          F  +  +       + R  + +  +    P+  R     A      PRR +  Y + ETRR Q+EQ KALAFVG SQ  HGL++  F D+ LR +  ML+R+ P    Q   + +++PEP    +  R K+ LP L  + D H     G Q S ++  ++  G+T+D+  +L +LPD+G+SLSKQIRAL S    +    +  P+
Sbjct:    1 MPRPRGARATRSSRLPETFEMQGHLIESYHHIDDLPRLSSEPKKRPRHVTRGAVAAERKAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPALTPAPTNPSPIPVDHIHPSFPSPASNPVPCRVCLKSNTALKIVRCSMCRKGIHTFCLNPPMMDLPNSASWKCFKCKRNAIALKKEKRMILRDALETYSALCTDDYVDKVIDAA-SVDAATITPGLIKP-------PSNTHQASPSRRLAKTPNNHNHTNLDINNTRAQASESIQSAQTLRAVIPIKYTSPSSAQPPPSNIPV-NQNTLILRVPKDLMLDELDFDKPLPPLQGHAASQTPHPPXXKRRRISRSSKSNKHSISSVPFPIQQGVAVKPSTSRRLPHTAAPKKRKPLSTPSHASPPLPKPVEPSRVANGNKIL---SPTEPPLSHSQPAHAAQARSAPSPVNTVDPVTVPDSSSSSESTPQEQQ-PAARCKASDRDDNPHSRSTVLQQPGTEIAPTRNANTKKSRDDLRDMRHLPIVKRYTLDKSKAISPPRKLTHAGEQSQNDSPSYTFLSPKAAICDVPPRPAAAVGSTRNSSKRLPQIPCSLNLAPQQRPHRRSGARKSLSSCSSDQQILSHSKRIAEKPHSTVDRSSAKPSISATSSVLRRHDASIAPPITIRDVPNRTSATWDEHHRRSAHAKRGSQHSKENGNVGHVEVDDELPHVSYRIGEDKLVSISIAAREGVVSREDGRVSRSPKQNAPAISAMQNSTRAAASNRLHNSLPTASTMGSSAPASTSGASVRIS----------DKHQLPTSVPMGADTMNVVTETPTPSRPWTG----TRPFQSRTDSLAHPSTQTRVGCAPEVEPISKGCAPRSETIGANRSSVAV------ARDSSTLNHELSSPAKTRCSLPLSNVISHQFTSTPAQVNAVTRNQPSLVHPLSTQADASVFREVPRFVRDPPACDPSIPTSADVQNSPFVTLENVERIGTQSASSGPTDTRPAISTGGSSIQGLPVIANRNCGTEVPLCHPSGANPR-PTLSQASGVRSSNPRVQPRYRDQ-TDNAAAPSKNHTSILKPSVDPTSKVPVTRSGDAKRNELPIDATRKLGVEDLQTQMGQSTPADRAVCNGIQSSSQVDVPLNESPAEATNAPVNVKELQWDAKREALLAFAQVQRTLA----------GNMQSRVKIGSNEGSQIARHMSRNRNVPETERIRMESTELAASSRLRQSSRLSSNFVSTRKGSISSLLHMNPEVPPQMSNLKRNSQAHCDEMPNTAGKQELNVVMNANYNGRS--VGFRESSNLR-PDPGPNRGQKRATRT--RDSYDIGEDRLHYQTSTRYGRAAGSLSGFN------KTSHSIHPLQERYSIRPSDDISFRHQPTRPKGGLSSFSRGHRKQPGPKGYGLTSSTPSSDPFRTEAYTAN-----RNILQSRYHPQRKSTIQSLPSASNLRLPRPENSGQHKFRPYNNASDDVRRLAPVAFPPQGSGSAAHPCGSPPAIEPMEMPPFGRPGDPIRYNDQPANKYRMAS-PSPSCPVNPADKSRVVQDSANGLFTARVDGQQETMALREVN-YTHQRALANALSTTPPHHEPDLPFGLHGRSVIPNQATDTRVKEPSTEYPVFHPAVRRRTTPTASVAR--PRRFSVPYVQPETRRAQFEQGKALAFVGTSQGGHGLSSRRFNDIGLRTDSPMLHRSAPQRPSQRILSLASVPEPRLPLQIRRAKDLLPDLTTNSDQHPNHHPGLQASATLGRSEIPGTTLDQAPQLDSLPDSGLSLSKQIRALASQRPERGPMHTNVPS 1762          
The following BLAST results are available for this feature:
BLAST of Gchil690.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMB7_9FLOR4.340e-11629.99Histone-lysine N-methyltransferase 2D n=1 Tax=Grac... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 135..182
e-value: 1.5E-6
score: 37.8
NoneNo IPR availableGENE3D2.30.30.1150coord: 74..185
e-value: 9.8E-14
score: 53.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 551..588
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 750..766
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1195..1269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1238..1269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1526..1545
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 551..600
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1122..1150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 749..780
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1579..1663
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 998..1034
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 384..441
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 691..732
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..511
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1195..1223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1603..1654
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 998..1027
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 136..181
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 133..184
score: 9.0005
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 132..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004431_piloncontigtig00004431_pilon:77029..82020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil690.t1Gchil690.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004431_pilon 77029..82020 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil690.t1 ID=Gchil690.t1|Name=Gchil690.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1664bp
MPRGRSARATRTSRLPEIFEMDGHLLESYNHIDDLPRLSDEPKKRPRHVT
RGSVAAERKAAAAAVRTSPVPTTSPRPMRRSRVAAAVAAAAAAAAADAAA
TASRANTNHVVNPSRVAADKKRAQQRKSAQLSKVCCRVCLRSYSATKIIR
CLVCRKGVHTFCLNPPLIDLPSFGSWKCQKCKRRAITLKREKRSILRDAL
VTYPSLCTNSLVEKIIDAAASIDAAAIKSKLTFPLTSNDVDVTETQAETP
ANDCASTATVIPVTDLDPNDLNQQSYFTTPDQTVQAVIPLSRAGHSRDPL
TASSIPLSNINSVIIRVPKKLLLEEIELPIHPRESPGYSKGSRHAVSDHQ
TGLKRAKRAGAPHRSQVPPVPKKRKLHPNVDGNAVPQALTNGAKSWETES
LKQPPLSKRSQSQAHQSAELLPGSSAFAQSSTRSSQCPVKRPPPSGSDGT
DSKPCLPPLQRNRLPLQKRYKYDVAQSVMGSAGQSPRKEKQASDELLSSP
AQPKTAGVFPIPRLDEVRSTIVAPLEKSTASDDERTPWLIPQCSSNVQVS
KTGSSILSSQTQRMTRNQRGFVAQERKPNSSHSVSLSGKDSKIARAEISR
EKKSSKHVPLVLSFQRHAGPYAKAYFNCPQSLAPVTKLVSPAMPNLVKVE
LDGNNVLGEHDEDSHHVDEVAPKSDDDINLAGLAGSALSLRTGHNNAAQP
DRAKFPRTPVPAWKERTKTSDSANPAHMPASQDRRVLFGNSPLLNVDLGH
TGVLSSSDNNGEESSSLAVRPGPESAKTSEPLISKMKLKVNGDNPISWTG
PCAGLQGFSTKCPQKFIKPTSGDFFAPHCDGGFWDYTRTMDPAPGTVSSK
KTVCKHASNAAAMVRDTELDPRNPPQERGTLVGHSSLTELPRLRSEKLES
KACGQATQTVKTVKKIPETTGENIVSSKLGTVSSRYSTEPQDIANIQKAV
NQSATPQNNSGNQTNAASICVKDLQWEAKREALMAFAQVQRQLAVSQGRR
KLQTGNPSGEVNTLRQDSSQVERNISRNKNVPETERHRMEVTALATSSRY
RSSKHELGAVRTVKKGSISSLLHSSSELPPSGRRTFNSNEHINRSDRTPL
HQFPWSTNYDSGSNFELLRMSADARSTDRHGGESQKRGISTSQQPIYDRR
QDYMYRPNTASLELHDRHLPGTSPVLPQQKAHLTPYLLEGRMNQVYESRS
ANEHVQQRPLGSDSFSQRARQRSSVRYGMRDQHIQCLTLNPMDESKKSSQ
GRAEPPLPSASNLHSHQPEHCAPNNCRVFRDVPNHVRLAPVSFLSNRDKT
GSSKTAAPVLEPMEMPPFGRPGDPIRYNDPPPLQYRKAATPSPIPHDRPR
LASDPNQNMKRVYMSTKVSNAEGVSGHLDQRQIAQTRQTFAQNDYATPTA
SGNEVRASDCAIGFLNVDPSKERTMMMNAPCMENLPRRHAKSYEESETRR
TQYEQKKALAFVGVSQERHGLNTGLFDLSLRPEESMLNRTPSLQMQHTPN
FSNLPEPGDAFRGPRLKETLPGLDYSDDYHVRPSGTQRSGSIRNNDALGS
TIDKVSRLGALPDAGMSLSKQIRALVSSNTRKASATSEAPNQCDRRQSDE
VSHALPTDISMPQSDSMRQPLAPTASVVTPPASTGPLSKDSSVAATTQED
VQGAVATDTVAGE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019786Zinc_finger_PHD-type_CS
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD