Gchil6848.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6848.t1
Unique NameGchil6848.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length389
Homology
BLAST of Gchil6848.t1 vs. uniprot
Match: A0A2V3IH98_9FLOR (30S ribosomal protein S1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH98_9FLOR)

HSP 1 Score: 584 bits (1506), Expect = 3.390e-208
Identity = 295/356 (82.87%), Postives = 328/356 (92.13%), Query Frame = 0
Query:   33 TRMIVTARVPNTENLSRFDRMRLRFGAPAVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQLEPNGALVDIGAKASAYCPLVEMSMNKVDKPEGAVRIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGALVLVEGLRAFLPSSHTSIRVPREELIGKELPLKFLEVDNEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGSILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKFVYERAEDMAARYHQRLEEERKAAADVADDIVSTLDMASLDDISVDPVPAEAA 388
            TRM+ TAR P+ +++SRF+RMR RFG PAVSEEKSGFTY+DFE+A++ FDY FENGDIC+GRV Q E NGALVDIGAKASA+CPL EMSM KV+K E A+ IGEDREFQ+ISREDANGQLKVSIRRIE+ARAWERVAQLQAEDVTV A V ++NRGG+LV++EGLRAFLPSSHTSIR PREELIG ELPLKFLEV  EKGRLVVSHRRA+VEKQMTNLVAGEVVEGV+RG+KPYGAF+DIGGVSGLLHVSQISHDHVGDI +++PDG V+KCMIINQDKEKGRISLSTKTLEPEPGDMLRD+  VYERAE+MAARYH+RLEEERKAAADVADDIVSTLD+ SLDDI VDPVPAEAA
Sbjct:    2 TRMVFTARAPSKDSISRFERMRQRFGVPAVSEEKSGFTYSDFEEAIADFDYRFENGDICSGRVYQYERNGALVDIGAKASAFCPLHEMSMIKVEKAEHALTIGEDREFQVISREDANGQLKVSIRRIEFARAWERVAQLQAEDVTVLAEVIAVNRGGSLVMIEGLRAFLPSSHTSIRTPREELIGVELPLKFLEVSAEKGRLVVSHRRAVVEKQMTNLVAGEVVEGVIRGVKPYGAFVDIGGVSGLLHVSQISHDHVGDIPAVVPDGTVVKCMIINQDKEKGRISLSTKTLEPEPGDMLRDAAMVYERAEEMAARYHKRLEEERKAAADVADDIVSTLDIGSLDDIGVDPVPAEAA 357          
BLAST of Gchil6848.t1 vs. uniprot
Match: R7QL07_CHOCR (30S ribosomal protein S1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL07_CHOCR)

HSP 1 Score: 584 bits (1506), Expect = 1.050e-207
Identity = 296/389 (76.09%), Postives = 339/389 (87.15%), Query Frame = 0
Query:    1 MAFVNSFLGAAVAPSKQTPSQQRRCSCALSTPTRMIVTARVP-NTENLSRFDRMRLRFGAPAVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQLEPNGALVDIGAKASAYCPLVEMSMNKVDKPEGAVRIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGALVLVEGLRAFLPSSHTSIRVPREELIGKELPLKFLEVDNEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGSILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKFVYERAEDMAARYHQRLEEERKAAADVADDIVSTLDMASLDDISVDPVPAEAA 388
            MAFVNSF G   A ++  P  ++ CS  LS PTRM+ TAR P + +++S+FDRMR ++G   V  + SGFTY DFE A+S+FDYSFE GDIC+GRV Q EPNGAL+DIGAKASAYCP+ EMSM +VDKPE A+ IGEDREFQIISREDANGQLK+SIRRIE+ RAWERVAQLQAEDVTVHA V S+NRGG LV++EGLRAFLP SH S+R PRE+L+G ELPLKFLEVD EK RLVVSHRRA+VEKQMTNLVAGE+V+GVVRGIKPYGAF+DIGG+SGLLHVSQISHDHV DIG+++ DG+ IKCMIINQDKEKGRISLSTKTLEPEPGDM+RDS FVYE+A++MAARYH+RLEEERKAAADVADDIVSTLDMASLDD+ VDPV  EAA
Sbjct:    1 MAFVNSFYGLPFASNRANPVSRKSCS-RLSYPTRMVATARPPASNQSMSKFDRMRDKYGLKRVQPKNSGFTYEDFETAISEFDYSFEEGDICSGRVFQYEPNGALIDIGAKASAYCPVAEMSMIRVDKPEQALTIGEDREFQIISREDANGQLKLSIRRIEFGRAWERVAQLQAEDVTVHAEVISVNRGGCLVMIEGLRAFLPGSHISLRTPREDLVGVELPLKFLEVDTEKNRLVVSHRRAVVEKQMTNLVAGEIVKGVVRGIKPYGAFVDIGGISGLLHVSQISHDHVADIGAVVQDGSEIKCMIINQDKEKGRISLSTKTLEPEPGDMIRDSAFVYEKADEMAARYHKRLEEERKAAADVADDIVSTLDMASLDDLGVDPVATEAA 388          
BLAST of Gchil6848.t1 vs. uniprot
Match: UPI001E1D3BAF (LOW QUALITY PROTEIN: 30S ribosomal protein S1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3BAF)

HSP 1 Score: 500 bits (1288), Expect = 3.940e-174
Identity = 248/361 (68.70%), Postives = 302/361 (83.66%), Query Frame = 0
Query:   28 ALSTPTRMIVTARVPNTENLSRFDRMRLRFGAPAVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQLEPNGALVDIGAKASAYCPLVEMSMNKVDKPEGAVRIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGALVLVEGLRAFLPSSHTSIRVPREELIGKELPLKFLEVDNEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGSILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKFVYERAEDMAARYHQRLEEERKAAADVADDIVSTLDMASLDDISVDPVPAEAA 388
            A+ T +  +  +R  +T  +++FDRMRL+FG P   E K+GF+Y +F  AMS FDY+F++GD C GRV Q EPNGALVDIGAKASAYCPL EMSM+++DKPE A+ IGEDREFQIIS ED+NGQL+VSIRR+E+  AWERVAQLQAEDVTV A V  +NRGG LVLVEGLRAFLP SH ++R PRE+++G ELPLKFLEVD  K RLVVSHRRA+VE+Q+T LV G++++GVVRG+KPYGAFID+ GVSGLLH+SQISHDH+ DI ++L +G  IKCM++ QDKEKGRISLSTKTLEPEPGD +RD + V++RA++M ARYH RLEEERKAAADVADDIVST DMASLDD+++DPV A  A
Sbjct:   56 AVETASPTLSVSRTKST--MTKFDRMRLKFGLPTPEEAKTGFSYDEFANAMSDFDYNFKDGDRCVGRVYQYEPNGALVDIGAKASAYCPLPEMSMHRLDKPERALDIGEDREFQIISNEDSNGQLRVSIRRLEFTLAWERVAQLQAEDVTVXAEVVQVNRGGCLVLVEGLRAFLPGSHMAMRNPREDMVGVELPLKFLEVDAAKNRLVVSHRRAMVERQITALVTGQIIQGVVRGVKPYGAFIDLNGVSGLLHISQISHDHISDISAVLKEGTEIKCMVLQQDKEKGRISLSTKTLEPEPGDFIRDPQMVFDRADEMCARYHARLEEERKAAADVADDIVSTXDMASLDDLAIDPVDAPMA 414          
BLAST of Gchil6848.t1 vs. uniprot
Match: A0A7S1TIC8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIC8_9RHOD)

HSP 1 Score: 419 bits (1076), Expect = 4.800e-142
Identity = 208/334 (62.28%), Postives = 269/334 (80.54%), Query Frame = 0
Query:   47 LSRFDRMRLRFGAPAVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQLEPNGALVDIGAKASAYCPLVEMSMNKVDKPEGAVRIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGALVLVEGLRAFLPSSHTSIRVPREELIGKELPLKFLEVDNEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGSILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKFVYERAEDMAARYHQRLEEERKAAADVADDIVSTLDMASLDDISV 380
            +++FD+MRL+FG      E SGF+Y DFEQ M K++ SF   D+C+G+V  +E  GALVDIGAKASA+ PL EM+++  D  E  +++G++R+FQIIS ED NGQL +S +R+E+ARAWER+AQ+Q+EDVTV A + S+NRGGA+V VE LR F+P SH S     EE IG E+ LKFLEVD EKGR+V+S RRA+VE+QMT+L  G V+EG V+ IKPYGAF+D+GG+SGLLH+SQISHDHV +I   L  G  IKCMIINQDKEKGRISLSTKTLEPEPGDML++ + VYE+AE+MA RYH++ EEE+KAAADVA+DIV++LDMASL+D+++
Sbjct:   62 MTKFDKMRLKFGFAKGKVEDSGFSYDDFEQEMGKYERSFVIDDVCSGKVYAVEQTGALVDIGAKASAFLPLSEMAIHPPDAIEDLLQVGDERDFQIISSEDKNGQLTISCKRLEFARAWERLAQMQSEDVTVRATITSVNRGGAMVEVENLRGFVPGSHMSSTANAEEKIGSEIRLKFLEVDQEKGRVVMSERRALVEQQMTDLAPGVVMEGTVKSIKPYGAFVDVGGMSGLLHISQISHDHVDNIEKSLIIGMSIKCMIINQDKEKGRISLSTKTLEPEPGDMLKNPQLVYEKAEEMAERYHKKREEEKKAAADVAEDIVASLDMASLEDLAI 395          
BLAST of Gchil6848.t1 vs. uniprot
Match: A0A1X6NTC5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTC5_PORUM)

HSP 1 Score: 394 bits (1012), Expect = 2.020e-132
Identity = 213/377 (56.50%), Postives = 274/377 (72.68%), Query Frame = 0
Query:    5 NSFLGAAVAPSKQTPSQQRRCSCALSTPTRMIVTARVPNTENLSRFDRMRLRFGAPAVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQLEPNGALVDIGAKASAYCPLVEMSMNKVDKPEGAVRIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGALVLVEGLRAFLPSSHTSIR-VPREELIGKELPLKFLEVDNEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGSILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKFVYERAEDMAARYHQRLEEERKAAADVADDIVSTLDMASLDDISV 380
            +SF GA  AP+     Q RR    ++T  RM   A  P     ++FDRMR ++GAPAV E K G  Y +FE A+    Y+F  GDI  G V QL+PNGA+VD+GAKASA CP VE+S+ +    E  +  G++REFQII  E+A+G+L +SIRRIE++RAW RVAQL AEDVT+   V S+NRGG LV+VEGLRAFLP SH S+R   +E+L+G ELPLK ++VD ++ +LVVSHR A    +MT+L  G VV G VR +KPYGAF+DIGGVSGLLH+SQISHDHV DI ++L  G  +K  ++NQDK+KGRISLSTK LE EPGDM+ DS  V+  AE++A RYH R+EEER+AA+ VA+DIVS+LD+ASLDD+ +
Sbjct:   16 SSFFGARAAPTSDV--QVRR---PVTTGARMQAAAGTP-----TKFDRMRQKWGAPAVDESKGGM-YQEFESALEGLSYNFSEGDIIPGVVQQLDPNGAMVDVGAKASALCPTVEVSIAQGTALEDVLAPGDEREFQIIRSENADGELLLSIRRIEFSRAWARVAQLAAEDVTIMGTVTSVNRGGGLVVVEGLRAFLPGSHISVRRESQEDLVGMELPLKLIQVDPDEKKLVVSHRLAAAASRMTSLETGSVVAGTVRSVKPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSAGMEVKAYVMNQDKDKGRISLSTKVLENEPGDMMTDSAAVFAGAEEIAERYHARVEEERRAASSVAEDIVSSLDIASLDDLGL 381          
BLAST of Gchil6848.t1 vs. uniprot
Match: A0A5J4Z972_PORPP (30S ribosomal protein S1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z972_PORPP)

HSP 1 Score: 386 bits (991), Expect = 1.510e-129
Identity = 201/382 (52.62%), Postives = 275/382 (71.99%), Query Frame = 0
Query:    1 MAFVNSFL-GAAVAPSKQTPSQQRRCSCALSTPTRMIVTARVPNTENLSRFDRMRLRFGAPAV-SEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQLEPNGALVDIGAKASAYCPLVEMSMNKVDKPEGAVRIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGALVLVEGLRAFLPSSHTSIRVPREELIGKELPLKFLEVDNEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGSILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKFVYERAEDMAARYHQRLEEERKAAADVADDIVSTLDMASLDDISV 380
            +AFVN  L G  +  +    S++   +CAL    RM+       T    +FD+MRL+FG     ++ +SGF+Y +FE  M  +D     GD+  G V Q++  GA VDIGAKASA+ P  E+S+   ++ E  +  GE REF++ S ED NGQL VS+++IE+ R WER+AQLQAED+T  A V S+NRGGA+V VE LR F+P SH  +    ++++G  LPLKF+EVD EKGR+V+SHRRAIV+ QMT++  G VVEG+VRG+KPYG F+D+ G++GL+H+SQISHD V +  +++   + +KCM+I+QDKEKGRISLSTKTLEPEPGDML+    VY+RAE+MA +YH+RLEEERKAAADVADDIVS+LD+A++DD+ +
Sbjct:    4 VAFVNGALQGQPLRQAAVLTSRKDAGACAL----RMVAAPAAAAT----KFDKMRLKFGVRTPKTQHESGFSYDEFESQMVNYDVKIGMGDLVQGTVVQIDSKGAFVDIGAKASAFLPEEELSIVGAERVEDFIEPGEQREFEVCSTEDVNGQLTVSLKKIEFRRCWERLAQLQAEDITTFATVESVNRGGAMVRVENLRGFIPGSHLGM-ANNQDIVGTNLPLKFIEVDPEKGRVVLSHRRAIVQSQMTDIETGAVVEGIVRGVKPYGIFVDVNGLTGLIHISQISHDRVDNPENVISVNSKVKCMVISQDKEKGRISLSTKTLEPEPGDMLKSPDAVYDRAEEMAEKYHKRLEEERKAAADVADDIVSSLDIANIDDLPI 376          
BLAST of Gchil6848.t1 vs. uniprot
Match: A0A1X6NLP1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLP1_PORUM)

HSP 1 Score: 384 bits (987), Expect = 1.410e-128
Identity = 208/380 (54.74%), Postives = 268/380 (70.53%), Query Frame = 0
Query:    2 AFVNSFLGAAVAPSKQTPSQQRRCSCALSTPTRMIVTARVPNTENLSRFDRMRLRFGAPAVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQLEPNGALVDIGAKASAYCPLVEMSMNKVDKPEGAVRIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGALVLVEGLRAFLPSSHTSIR-VPREELIGKELPLKFLEVDNEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGSILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKFVYERAEDMAARYHQRLEEERKAAADVADDIVSTLDMASLDDISV 380
            AF  + + AA  P+  T + +R        PT M+     P     ++FDRMR ++GAPAV E K G  Y +F  A+    Y+F  GDI  G V QL+PNGA++D+GAKASA CP VE+S+ +    E  + +G+ REFQII  E+A+G+L +SIRRIEY+RAW RVAQL AEDVT+   VAS+NRGG LV VEGLRAFLP SH S+R   +E+L+G ELPLK ++VD  + +LVVSHR A    +MT L  G VV G VR +KPYGAF+DIGGVSGLLH+SQISHDHV DI ++L  G  +K  ++NQ+K+KGRISLSTK LE EPGDM+ D+  V+  A+D AA YH R+EEER AA+ VADDIVS+LD+A+LDD+ +
Sbjct:   20 AFTGAAISAAPPPAAATATARR------GAPT-MVAAVGTP-----TKFDRMRQKWGAPAVDESK-GDMYEEFATALEGISYNFAEGDIIPGVVQQLDPNGAMIDVGAKASAVCPTVEVSIAQGVNLEDVLTLGDQREFQIIRSENADGELMLSIRRIEYSRAWARVAQLAAEDVTISGTVASVNRGGGLVTVEGLRAFLPGSHISVRREQQEDLVGMELPLKLIQVDPAEKKLVVSHRLAAAASRMTTLETGSVVTGTVRSVKPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLTPGMEVKAFVMNQEKDKGRISLSTKVLEAEPGDMMTDAAAVFAGADDAAAAYHARVEEERVAASSVADDIVSSLDIATLDDLGL 386          
BLAST of Gchil6848.t1 vs. uniprot
Match: L1IVV6_GUITC (Ribosomal protein S1, chloroplastic n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1IVV6_GUITC)

HSP 1 Score: 363 bits (931), Expect = 3.660e-120
Identity = 186/342 (54.39%), Postives = 250/342 (73.10%), Query Frame = 0
Query:   44 TENLSRFDRMRLRFGAPA----VSEEK------SGFTYTDFEQAMSKFDYSFENGDICTGRVSQLEPNGALVDIGAKASAYCPLVEMSMNKVDKPEGAVRIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGALVLVEGLRAFLPSSHTSIRVPREELIGKELPLKFLEVDNEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGSILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKFVYERAEDMAARYHQRLEEERKAAADVADDIVSTLDMASL 375
            T   S+F++MR ++G P+    +S+E       +GF Y+DFE A++KFD +F+ GD+  G+V Q E  GALVDIG K+SAY    E SM +VD  E  + I ++REFQIIS ED NGQ+++SIR++E+ARAWERV Q+QAED T+ A + SINRGGAL+  EGLR FLP SH    +  E+ +G  +PLKFLEVD  K RLVVS+RRA+VE ++ NL  G++V G+VR IKPYGAF+DIGG+SGLLH+SQISHDH+ D+  +L +G  IK MI+ QDK+KGR SLSTKTLE EPGDM+R+ + V E AE+ A RYH+RL+ E++A    A ++V+ LD+ +L
Sbjct:   57 TAPTSKFEKMRFKYGKPSLERGISQEMKDAQKIAGFDYSDFESAIAKFDNTFQVGDVVVGQVVQFEQGGALVDIGGKSSAYLGAAEASMQRVDDIEMFLSIADNREFQIISGEDENGQVRLSIRKLEFARAWERVRQIQAEDCTIMAEILSINRGGALINFEGLRGFLPGSHAPQGMT-EDTVGTMIPLKFLEVDQAKNRLVVSNRRAVVETKLVNLEPGQLVTGIVRSIKPYGAFVDIGGISGLLHISQISHDHISDVSKVLQEGQEIKAMILTQDKDKGRFSLSTKTLEAEPGDMIRNPEMVKENAEETAKRYHERLQAEQQARDQAASELVAGLDLNAL 397          
BLAST of Gchil6848.t1 vs. uniprot
Match: A0A0P4V0Q1_9CYAN (SSU ribosomal protein S1p n=12 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A0P4V0Q1_9CYAN)

HSP 1 Score: 358 bits (918), Expect = 3.510e-119
Identity = 180/317 (56.78%), Postives = 237/317 (74.76%), Query Frame = 0
Query:   68 GFTYTDFEQAMSKFDYSFENGDICTGRVSQLEPNGALVDIGAKASAYCPLVEMSMNKVDKPEGAVRIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGALVLVEGLRAFLPSSHTSIRVPREELIGKELPLKFLEVDNEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGSILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKFVYERAEDMAARYHQRLEEERKAAADVADDIVSTLDMASLDDISVDPVP 384
            GFT+ DF   + K+DY F  GD+  G V  LEP GAL+DIGAK +AY P+ EMS+N++D PE  ++  E REF I++ E+ +GQL +SIRRIEY RAWERV QLQAED TV ++V + NRGGALV +EGLR F+P SH S R P+EEL+G+ELPLKFLEVD E+ RLV+SHRRA+VE++M  L  GEVV G VRGIKPYGAFIDIGGVSGLLH+S+ISHDH+    S+      +K MII+ D E+GRISLSTK LEPEPGDM+++ + VY++AE+MAA+Y + ++++ + AA  A +I   ++ A +    V+ +P
Sbjct:   10 GFTHEDFAALLDKYDYHFSPGDVVAGTVFSLEPRGALIDIGAKTAAYIPIQEMSINRIDAPEEVLQSNETREFFILADENEDGQLTLSIRRIEYMRAWERVRQLQAEDATVRSLVFATNRGGALVRIEGLRGFIPGSHISTRKPKEELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDEVKVMIIDLDAERGRISLSTKQLEPEPGDMVKNPQVVYDKAEEMAAKYRENMKQQAQGAAIPAIEIPVAVEDAPVATEEVEAIP 326          
BLAST of Gchil6848.t1 vs. uniprot
Match: Q8DHB3_THEVB (30S ribosomal protein S1 n=8 Tax=Cyanobacteria TaxID=1117 RepID=Q8DHB3_THEVB)

HSP 1 Score: 357 bits (915), Expect = 8.150e-119
Identity = 186/330 (56.36%), Postives = 245/330 (74.24%), Query Frame = 0
Query:   62 VSEEKS---GFTYTDFEQAMSKFDYSFENGDICTGRVSQLEPNGALVDIGAKASAYCPLVEMSMNKVDKPEGAVRIGEDREFQIISREDANGQLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGALVLVEGLRAFLPSSHTSIRVPREELIGKELPLKFLEVDNEKGRLVVSHRRAIVEKQMTNLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGSILPDGAVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKFVYERAEDMAARYHQRL-EEERKAAADVADDIVSTLDMASLDDISVDPVPAEA 387
            V++EK+   GFT+ DF   + ++DY F  GDI  G V  +EP GAL+DIGAK +AY P+ EMS+N+++ PE  ++  E REF I++ E+  GQL +SIRRIEY RAWERV QLQAED TV + V + NRGGALV +EGLR F+P SH S RV +EEL+G+ELPLKFLEVD E+ RLV+SHRRA+VE++M  L  GEVV G VRGIKPYGAFIDIGGVSGLLH+S+ISHDH+    S+      +K MII+ D E+GRISLSTK LEPEPGDM+++ + VYE+AE+MA RY Q+L +++++AA +  ++ +  +  A+ DD S  P+  EA
Sbjct:    2 VNQEKTLDVGFTHADFAALLDRYDYHFNPGDIVAGTVFSIEPKGALIDIGAKTAAYIPIQEMSINRIESPEEVLQPNETREFFILADENEEGQLTLSIRRIEYMRAWERVRQLQAEDATVRSQVFATNRGGALVRIEGLRGFIPGSHISTRVNKEELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNKLEVGEVVVGTVRGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDQVKVMIIDLDAERGRISLSTKQLEPEPGDMVKNPQLVYEKAEEMAERYRQQLLQQQQQAAGETPEEGMEDIPEATEDD-SPAPILQEA 330          
The following BLAST results are available for this feature:
BLAST of Gchil6848.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IH98_9FLOR3.390e-20882.8730S ribosomal protein S1 n=1 Tax=Gracilariopsis ch... [more]
R7QL07_CHOCR1.050e-20776.0930S ribosomal protein S1 n=1 Tax=Chondrus crispus ... [more]
UPI001E1D3BAF3.940e-17468.70LOW QUALITY PROTEIN: 30S ribosomal protein S1-like... [more]
A0A7S1TIC8_9RHOD4.800e-14262.28Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6NTC5_PORUM2.020e-13256.50Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z972_PORPP1.510e-12952.6230S ribosomal protein S1 n=1 Tax=Porphyridium purp... [more]
A0A1X6NLP1_PORUM1.410e-12854.74Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
L1IVV6_GUITC3.660e-12054.39Ribosomal protein S1, chloroplastic n=2 Tax=Gemini... [more]
A0A0P4V0Q1_9CYAN3.510e-11956.78SSU ribosomal protein S1p n=12 Tax=Cyanobacteria/M... [more]
Q8DHB3_THEVB8.150e-11956.3630S ribosomal protein S1 n=8 Tax=Cyanobacteria Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 338..358
NoneNo IPR availableGENE3D2.40.50.140coord: 250..329
e-value: 3.1E-21
score: 77.1
NoneNo IPR availableGENE3D2.40.50.140coord: 170..249
e-value: 1.1E-7
score: 33.6
coord: 71..169
e-value: 6.0E-17
score: 63.2
NoneNo IPR availablePANTHERPTHR10724:SF1130S RIBOSOMAL PROTEIN S1, CHLOROPLASTICcoord: 65..362
NoneNo IPR availablePANTHERPTHR1072430S RIBOSOMAL PROTEIN S1coord: 65..362
NoneNo IPR availableCDDcd05687S1_RPS1_repeat_ec1_hs1coord: 88..157
e-value: 1.18065E-13
score: 63.7023
NoneNo IPR availableCDDcd04465S1_RPS1_repeat_ec2_hs2coord: 175..239
e-value: 7.42445E-20
score: 80.5807
IPR035104Ribosomal protein S1-likePRINTSPR00681RIBOSOMALS1coord: 224..244
score: 29.93
coord: 196..213
score: 47.62
coord: 88..106
score: 34.59
coord: 106..120
score: 34.29
coord: 154..173
score: 21.43
coord: 178..194
score: 24.37
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 251..321
e-value: 1.4E-21
score: 87.7
coord: 86..157
e-value: 7.8E-12
score: 55.3
coord: 173..239
e-value: 6.6E-9
score: 45.6
IPR003029S1 domainPFAMPF00575S1coord: 252..321
e-value: 1.1E-13
score: 51.4
coord: 175..239
e-value: 5.3E-8
score: 33.1
coord: 85..157
e-value: 7.0E-10
score: 39.1
IPR003029S1 domainPROSITEPS50126S1coord: 88..157
score: 15.836399
IPR003029S1 domainPROSITEPS50126S1coord: 175..239
score: 12.574102
IPR003029S1 domainPROSITEPS50126S1coord: 253..321
score: 20.15613
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 171..244
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 252..332
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 79..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:413344..414510 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6848.t1Gchil6848.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 413344..414510 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6848.t1 ID=Gchil6848.t1|Name=Gchil6848.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=389bp
MAFVNSFLGAAVAPSKQTPSQQRRCSCALSTPTRMIVTARVPNTENLSRF
DRMRLRFGAPAVSEEKSGFTYTDFEQAMSKFDYSFENGDICTGRVSQLEP
NGALVDIGAKASAYCPLVEMSMNKVDKPEGAVRIGEDREFQIISREDANG
QLKVSIRRIEYARAWERVAQLQAEDVTVHAVVASINRGGALVLVEGLRAF
LPSSHTSIRVPREELIGKELPLKFLEVDNEKGRLVVSHRRAIVEKQMTNL
VAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGSILPDGA
VIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKFVYERAEDMAARYHQ
RLEEERKAAADVADDIVSTLDMASLDDISVDPVPAEAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035104Ribosomal_protein_S1-like
IPR022967S1_dom
IPR003029S1_domain
IPR012340NA-bd_OB-fold