Gchil6821.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6821.t1
Unique NameGchil6821.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length727
Homology
BLAST of Gchil6821.t1 vs. uniprot
Match: A0A2V3J3V5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3V5_9FLOR)

HSP 1 Score: 440 bits (1132), Expect = 1.640e-142
Identity = 297/667 (44.53%), Postives = 381/667 (57.12%), Query Frame = 0
Query:   94 MKADGSIKQNGGVLNIAFIPPFVISDDAEEQVSIDKNSRLRAGLWKEASRFDWDSRSRILQLLFIMAAFSATLSGWIGSSECYSPKSAIEIWKRFSDPSFCTVAMPLEEASSPQDIRQGWETAVKVIKTNVAELYHDKEKPIPPRLRRWGRQTEFAVRITDVQERTVIWFAQLVSEMCVMTHDRLAQQSTVLK-NFLKPLAVQAEASFQALLEREVGIALDQV-NWKGVFSEQRALELLSRCQHSIRVLKQVPDDSSESAVPHSDRDEDENMEEGRTSEPKSGENHEY----------KHGERQEVLSPISPDVDVTHARKLNRTDE-LSLRLGGISGRKEVDAS---TKTEDVHQLAPGNIMEESDTDASSPVFIRPPSQSNERGEKQDSGCTSKQYETSIDPGARDQTMSSKHNSIAGQKDAENCLKDQNRENEHSDDRRLINSHGNYTGAQLPQQGQNDWQSR-GIQKRFGRYVGTNGESHSIEKRRASEVGL-------PKKKARVQVKHS------TDSVEQHGV-AMAKDIAQ------GRCTPPCDSELIQEVENAPNRSKSAVDSISHPSGLEGEYSVSDNRRYGKKQFISSICQDGGPDQRQTAQAGTVSESHRQRIADRIAIQVKREVLLRRQRSDMVERNGRHMVVPPKKRPKYLE 723
            MKADGSIKQNGGVLNIAFIPPFVISDDAEEQVSIDK SR+RAGLWKEASRFDWDSRSRILQLLF+MAAF ATL+GWIGSS+CYSP++ I IWKRF+DPSFCT  M  E  SSPQDIRQGWE AVKVIK+NV ELYHDKEKPIPPRLRRWGRQTEFAVR+ DVQ RTV W AQL+ EMC +T++RL+++   L   FLK  A QAE ++  LLERE+GIALDQ  NWK  FSE++ L      + S   + Q  ++SS SA   S++D+ +N              H++          KHGE+++VLSPISPDVD     KLNR +  +SL  G  S + ++  S     TED    A      E   D S  +F +   +  E G K      SK    + D    D     ++  +  +       + Q RE   SD+  +          + P   +N  Q R G Q+ F        E+H +   + + +G        PKKKAR ++  +       +  EQ G    AK          G  TP    E   +  +    SK+      H  G E   +  D+                  ++  T +   V+ESH +R+ +RIA+QV++E LLRRQR DMVER+G+H++VPP+KRP+YL+
Sbjct:    1 MKADGSIKQNGGVLNIAFIPPFVISDDAEEQVSIDKTSRVRAGLWKEASRFDWDSRSRILQLLFVMAAFCATLTGWIGSSDCYSPEAVIAIWKRFADPSFCTSTMHPEHTSSPQDIRQGWEIAVKVIKSNVGELYHDKEKPIPPRLRRWGRQTEFAVRLPDVQSRTVSWCAQLMQEMCFLTYNRLSERFKNLDAQFLKQFATQAEEAYTVLLEREIGIALDQSPNWKESFSEEKVLRDFCDHRDSNGAMNQHSENSSGSAASESEQDDAQNXXXXXXXXXXXXXXHDHDRMEVDTEQRKHGEQEDVLSPISPDVDTLRDTKLNRREAGMSLEQGS-SDQNKIKPSKGVANTEDPMHDASN----EKCDDPSPALFKKLGERIREEGTK---AIRSKLQNYAEDVSDFDDVQLHQNAQVQYRSSGTLSRRGQGREENGSDEDEV----------RAPNHQEN--QDRLGAQESF--------ENHRVNAVQPNTMGSVRAVSNPPKKKARTRLHQNGYRSTGNEVEEQPGQRTRAKSYGSHGNHHGGMVTPDDPEEFRHKDTSTAQPSKANSLKYRHGHGHEPPLTKGDD----------------AINEEPTGKEEEVTESHHKRLVERIALQVRKEALLRRQRGDMVERHGKHIIVPPRKRPQYLK 623          
BLAST of Gchil6821.t1 vs. uniprot
Match: A0A2V3IV05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV05_9FLOR)

HSP 1 Score: 182 bits (461), Expect = 9.190e-50
Identity = 94/171 (54.97%), Postives = 119/171 (69.59%), Query Frame = 0
Query:  159 MAAFSATLSGWIGSSECYSPKSAIEIWKRFSDPSFCTVAMPLEEASSPQDIRQGWETAVKVIKTNVAELYHDKEKPIPPRLRRWGRQTEFAVRITDVQERTVIWFAQLVSEMCVMTHDRLAQQ-STVLKNFLKPLAVQAEASFQALLEREVGIALDQV-NWKGVFSEQRAL 327
            MAAF ATL+GWIGS + YSP++ I IWKR +D S  T  M  E  SSPQ IR GWE AV+VIK+N+ ELYHDKEKP PPRLR+WGRQTEFA R+ D+Q RT+   AQL+ E+C +T+ RL ++   V   FLK  A Q E ++  L ER++GI LD   NWK   SE++ +
Sbjct:    1 MAAFCATLTGWIGSPDWYSPEAGIGIWKRLADRSSWTSTMHPENTSSPQYIRLGWEIAVRVIKSNIGELYHDKEKPNPPRLRKWGRQTEFATRLRDLQSRTLSLCAQLMQEICFLTYHRLLERFKNVHAQFLKQFARQPEEAYTVLWERKIGIDLDHFPNWKESVSEEKVV 171          
BLAST of Gchil6821.t1 vs. uniprot
Match: A0A2V3ITM3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITM3_9FLOR)

HSP 1 Score: 77.4 bits (189), Expect = 2.820e-12
Identity = 72/215 (33.49%), Postives = 105/215 (48.84%), Query Frame = 0
Query:  270 MCVMTHDRLAQQSTVLK-NFLKPLAVQAEASFQALLEREVGIALD-QVNWKGVFSEQRALELLSRCQHSIRVLKQVPDDSSESAVPHSDRDEDENMEEGRTSEPKSGENHEY----------KHGERQEVLSPISPDVDVTHARKLNRTDE-LSLRLGG-----ISGRKEVDASTKTED-VHQLAPGNIMEESDTDASSPVFIRPPSQSNERGEK 465
            MC +T+ RL +    L   FLKP + +AE + + LLERE+G ALD   NWK  FSE+  L  +   + +   + +  ++SS SA   S++D+ +N+        K+   H++          KHGE++EVLSPISP +      KLNR +  +SL  G      I  RK V     TED +H  +  N       D S  +F R   +  E G K
Sbjct:    1 MCFLTYHRLVEGYKNLDAQFLKPFSTKAEEACKVLLEREIGTALDPSPNWKESFSEEIVLRDVFDHRDANGAMNEHSENSSCSAASKSEQDDAQNIHSEDNELQKTHHQHDHEHMEVDTEQRKHGEQEEVLSPISPYLHALRDTKLNRREAGMSLEQGSSDQNKIKPRKSV---ANTEDPIHDTSNENC-----DDPSPALFKRFDERIREEGTK 207          
The following BLAST results are available for this feature:
BLAST of Gchil6821.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J3V5_9FLOR1.640e-14244.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IV05_9FLOR9.190e-5054.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITM3_9FLOR2.820e-1233.49Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 350..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 706..726
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 656..677
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 462..497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 442..456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 421..538
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 522..538
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 503..521
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 171..726
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:57451..59631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6821.t1Gchil6821.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 57451..59631 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6821.t1 ID=Gchil6821.t1|Name=Gchil6821.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=727bp
MDINTRKGFPPPNKSNLYRLLKRFRSILEHNQLSIRTSHSNNEATLLKVC
EKLCHRKKLCVRLLKLSGLCVMPEVMQTLHRYRHLRVYSYREYMKADGSI
KQNGGVLNIAFIPPFVISDDAEEQVSIDKNSRLRAGLWKEASRFDWDSRS
RILQLLFIMAAFSATLSGWIGSSECYSPKSAIEIWKRFSDPSFCTVAMPL
EEASSPQDIRQGWETAVKVIKTNVAELYHDKEKPIPPRLRRWGRQTEFAV
RITDVQERTVIWFAQLVSEMCVMTHDRLAQQSTVLKNFLKPLAVQAEASF
QALLEREVGIALDQVNWKGVFSEQRALELLSRCQHSIRVLKQVPDDSSES
AVPHSDRDEDENMEEGRTSEPKSGENHEYKHGERQEVLSPISPDVDVTHA
RKLNRTDELSLRLGGISGRKEVDASTKTEDVHQLAPGNIMEESDTDASSP
VFIRPPSQSNERGEKQDSGCTSKQYETSIDPGARDQTMSSKHNSIAGQKD
AENCLKDQNRENEHSDDRRLINSHGNYTGAQLPQQGQNDWQSRGIQKRFG
RYVGTNGESHSIEKRRASEVGLPKKKARVQVKHSTDSVEQHGVAMAKDIA
QGRCTPPCDSELIQEVENAPNRSKSAVDSISHPSGLEGEYSVSDNRRYGK
KQFISSICQDGGPDQRQTAQAGTVSESHRQRIADRIAIQVKREVLLRRQR
SDMVERNGRHMVVPPKKRPKYLEPCL*
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