Gchil6803.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6803.t1
Unique NameGchil6803.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length246
Homology
BLAST of Gchil6803.t1 vs. uniprot
Match: A0A2V3J225_9FLOR (G-patch_2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J225_9FLOR)

HSP 1 Score: 147 bits (370), Expect = 8.690e-40
Identity = 94/224 (41.96%), Postives = 134/224 (59.82%), Query Frame = 0
Query:    5 LKRAAARRKRGHSHKLAT-RRTPSVAAAFGIGDDSENSDDAPQTQKVTTISVIVDVEPSAEAPPEQHLGEQVEHRVEKMG----PKTSQIASMIERRKEAAIVSTIPREEKDNALFKYEVANCPDEADTYLYKQRPVDGFGEMMLRSMGWSGKERLQEKYEPPVARPNRLGLGAKISFLKNPERRKRAREKES-KTGSAPDTCTEQEAPDEKGEGITVDRETAR 222
            +KR AARRK+  ++ L   ++ PS   AF    DS+ S DA + +K+TT+S      P+ +    Q    + E + E       PKTSQIA ++ERRKEA + S+  R+++DN LF+Y+++ C + AD   Y QRPVDGFGEMML++MGWSGK+  +EK++ PV RP+RLGLGAK+   K P   KR R   + +   A       E+ D  G G+T+D  T R
Sbjct:    7 IKRTAARRKKARANTLPPLKKQPS---AFASEHDSDASTDASRPRKITTVST-----PAPKTENNQSTSVKAEQQAEAQENTTRPKTSQIARLVERRKEAQLSSSTNRDQRDNVLFQYDLSKCAEGADGAGYDQRPVDGFGEMMLKAMGWSGKKSAEEKHKAPVPRPSRLGLGAKLDNQKKPPPTKRLRSTANDRVLIANGAQHGAESEDNGGNGVTIDSRTTR 222          
BLAST of Gchil6803.t1 vs. uniprot
Match: R7QTE2_CHOCR (G-patch_2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTE2_CHOCR)

HSP 1 Score: 86.3 bits (212), Expect = 1.890e-16
Identity = 62/179 (34.64%), Postives = 88/179 (49.16%), Query Frame = 0
Query:   12 RKRGHSHKLATRRTPSVAAAFGIGDDSENSDDAPQTQKVTTISVIV-DVEPSAEAPPEQHLGEQ-----VEHRVEKMGPKTSQIASMIERRKEAAIVSTIPR--EEKDNALFKYEVANCPDEADTYLYKQRPVDGFGEMMLRSMGWSGKERLQEKYEP-------PVARPNRLGLGAKI 175
            R+R H+  L +R      A  G   D ++ D+ P+ + V+ +     D +    A   +  GE+     +E + +    K SQIA ++ERRK+A     +    E KD ALF+Y+V  C  E     Y+  PVDGFG  MLRSMGW G    + K          P  RP+RLGLGAK+
Sbjct:   12 RRRPHAGGLGSRCVAQPQAVHGFSGDEDSGDEKPRGKSVSHVGDSPHDQQKQIPAQGIKTNGEKGRIKVMEEKADSPKVKVSQIARLVERRKDAERELQVSDSVETKDEALFRYDVERCSREVSLQTYQGTPVDGFGAAMLRSMGWRGNTEKKGKGSKDLSDSWRPKPRPSRLGLGAKL 190          
The following BLAST results are available for this feature:
BLAST of Gchil6803.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J225_9FLOR8.690e-4041.96G-patch_2 domain-containing protein n=1 Tax=Gracil... [more]
R7QTE2_CHOCR1.890e-1634.64G-patch_2 domain-containing protein n=1 Tax=Chondr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026822Spp2/MOS2, G-patch domainPFAMPF12656G-patch_2coord: 123..174
e-value: 2.4E-10
score: 40.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:1237733..1238470 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6803.t1Gchil6803.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 1237733..1238470 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6803.t1 ID=Gchil6803.t1|Name=Gchil6803.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=246bp
MSFALKRAAARRKRGHSHKLATRRTPSVAAAFGIGDDSENSDDAPQTQKV
TTISVIVDVEPSAEAPPEQHLGEQVEHRVEKMGPKTSQIASMIERRKEAA
IVSTIPREEKDNALFKYEVANCPDEADTYLYKQRPVDGFGEMMLRSMGWS
GKERLQEKYEPPVARPNRLGLGAKISFLKNPERRKRAREKESKTGSAPDT
CTEQEAPDEKGEGITVDRETARSDYKRIIRVKRLREEQHTHTHSN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026822Spp2/MOS2_G-patch