Gchil6789.t2 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6789.t2
Unique NameGchil6789.t2
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length133
Homology
BLAST of Gchil6789.t2 vs. uniprot
Match: A0A2V3J221_9FLOR (Peroxisomal membrane protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J221_9FLOR)

HSP 1 Score: 95.1 bits (235), Expect = 5.760e-22
Identity = 51/66 (77.27%), Postives = 59/66 (89.39%), Query Frame = 0
Query:    8 LSLPSVVLWLAWRSYLRKLQVDPLLTKSITAAVLSVLSEVAAKRLNNLPLKSSTAIHELTIGLVLR 73
            + LPSVV+ +AWRSYL++LQ DPLLTK+IT+AVLSV SEV AKRL NLPLKSS A+HELTIGLVLR
Sbjct:    1 MPLPSVVITVAWRSYLQRLQKDPLLTKAITSAVLSVCSEVFAKRLRNLPLKSSAAMHELTIGLVLR 66          
BLAST of Gchil6789.t2 vs. uniprot
Match: R7QF42_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF42_CHOCR)

HSP 1 Score: 84.0 bits (206), Expect = 1.460e-17
Identity = 42/70 (60.00%), Postives = 57/70 (81.43%), Query Frame = 0
Query:    4 PPSRLSLPSVVLWLAWRSYLRKLQVDPLLTKSITAAVLSVLSEVAAKRLNNLPLKSSTAIHELTIGLVLR 73
            P    +LP  +L +AW SY++KLQ DPLLTK++T+A+LSV S+V AKR+  +PL+SSTA++ELTIGLVLR
Sbjct:    5 PTVSKTLPGFILSMAWNSYMQKLQSDPLLTKAVTSAILSVFSDVFAKRMKQMPLRSSTAMNELTIGLVLR 74          
BLAST of Gchil6789.t2 vs. uniprot
Match: M2WZF2_GALSU (Peroxisomal membrane MPV17/PMP22-like protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WZF2_GALSU)

HSP 1 Score: 70.9 bits (172), Expect = 2.010e-12
Identity = 38/67 (56.72%), Postives = 52/67 (77.61%), Query Frame = 0
Query:    9 SLPSVVLWLAWRSYLRKLQVDPLLTKSITAAVLSVLSEVAAKRL--NNLPLKSSTAIHELTIGLVLR 73
            S+PS +L +AWR+YLRKLQ DPL+TK+ITA++LS +S +AA+    N   LKSS  IH++TIGL +R
Sbjct:   22 SVPSSILTIAWRAYLRKLQTDPLVTKAITASILSGISTIAARVFQGNGSELKSSEIIHQMTIGLAVR 88          
BLAST of Gchil6789.t2 vs. uniprot
Match: A0A5J4Z5Y3_PORPP (Peroxisomal membrane protein 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5Y3_PORPP)

HSP 1 Score: 67.0 bits (162), Expect = 6.260e-11
Identity = 34/65 (52.31%), Postives = 52/65 (80.00%), Query Frame = 0
Query:    9 SLPSVVLWLAWRSYLRKLQVDPLLTKSITAAVLSVLSEVAAKRLNNLPLKSSTAIHELTIGLVLR 73
            S   +VL +AW  YLR L+ DP+LTKS++A VLSV+S++AAK+L+  P+++S+  +ELT+GLV+R
Sbjct:   16 SAAGMVLRVAWSRYLRALETDPVLTKSVSAGVLSVVSDLAAKQLSKDPVRTSSLFNELTMGLVIR 80          
BLAST of Gchil6789.t2 vs. uniprot
Match: A0A7S1XFW1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFW1_9RHOD)

HSP 1 Score: 62.0 bits (149), Expect = 5.880e-9
Identity = 29/56 (51.79%), Postives = 47/56 (83.93%), Query Frame = 0
Query:   18 AWRSYLRKLQVDPLLTKSITAAVLSVLSEVAAKRLNNLPLKSSTAIHELTIGLVLR 73
            AWR+YL +L  +P++TK+I+A +LS++S++ AKRL   P+KSS+ I+EL++GLV+R
Sbjct:   54 AWRTYLARLHSNPIMTKAISAGLLSIVSDLVAKRLTKEPVKSSSLINELSMGLVIR 109          
BLAST of Gchil6789.t2 vs. uniprot
Match: M2XYV6_GALSU (Peroxisomal membrane MPV17/PMP22-like protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XYV6_GALSU)

HSP 1 Score: 60.8 bits (146), Expect = 1.510e-8
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 0
Query:    9 SLPSVVLWLAWRSYLRKLQVDPLLTKSITAAVLSVLSEVAAKRLNNL--PLKSSTAIHELTIGLVLR 73
            S  S +  LAWRSYLR+LQ +PL+TKSIT+ ++S LS V A  + +    LKSS  I+E TIGLVLR
Sbjct:   46 SATSYIYILAWRSYLRQLQTNPLITKSITSGIISSLSTVLASIIEDKCEGLKSSKVINEFTIGLVLR 112          
BLAST of Gchil6789.t2 vs. uniprot
Match: A0A7J7IDU7_9RHOD (Peroxisomal membrane protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDU7_9RHOD)

HSP 1 Score: 56.2 bits (134), Expect = 1.170e-6
Identity = 28/56 (50.00%), Postives = 42/56 (75.00%), Query Frame = 0
Query:   18 AWRSYLRKLQVDPLLTKSITAAVLSVLSEVAAKRLNNLPLKSSTAIHELTIGLVLR 73
            AW  YLRKL+ DP+LTKSITAAV+S++S++ A  L+   L S + +++ +IGL +R
Sbjct:   64 AWSGYLRKLRTDPVLTKSITAAVISLVSDLLASSLSGSKLSSRSLMNQFSIGLAIR 119          
BLAST of Gchil6789.t2 vs. uniprot
Match: M1VBF4_CYAM1 (Similar to peroxisomal membrane protein PMP22 n=2 Tax=cellular organisms TaxID=131567 RepID=M1VBF4_CYAM1)

HSP 1 Score: 56.2 bits (134), Expect = 1.180e-6
Identity = 26/55 (47.27%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   19 WRSYLRKLQVDPLLTKSITAAVLSVLSEVAAKRLNNLPLKSSTAIHELTIGLVLR 73
            W+SYLRKLQ DP++TKSI+AA++S++S++ A  L+   L S + +++ +IGL +R
Sbjct:   65 WKSYLRKLQTDPVVTKSISAAIISLVSDLLASSLSGSKLSSRSLLNQFSIGLAIR 119          
The following BLAST results are available for this feature:
BLAST of Gchil6789.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3J221_9FLOR5.760e-2277.27Peroxisomal membrane protein 2 n=1 Tax=Gracilariop... [more]
R7QF42_CHOCR1.460e-1760.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2WZF2_GALSU2.010e-1256.72Peroxisomal membrane MPV17/PMP22-like protein n=1 ... [more]
A0A5J4Z5Y3_PORPP6.260e-1152.31Peroxisomal membrane protein 2 n=1 Tax=Porphyridiu... [more]
A0A7S1XFW1_9RHOD5.880e-951.79Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M2XYV6_GALSU1.510e-855.22Peroxisomal membrane MPV17/PMP22-like protein n=1 ... [more]
A0A7J7IDU7_9RHOD1.170e-650.00Peroxisomal membrane protein n=1 Tax=Cyanidiococcu... [more]
M1VBF4_CYAM11.180e-647.27Similar to peroxisomal membrane protein PMP22 n=2 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..132
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:1185303..1185952 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6789.t2Gchil6789.t2Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 1185303..1185952 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6789.t2 ID=Gchil6789.t2|Name=Gchil6789.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=133bp
MLPPPSRLSLPSVVLWLAWRSYLRKLQVDPLLTKSITAAVLSVLSEVAAK
RLNNLPLKSSTAIHELTIGLVLRCRQAATRSIRVRPHVHVALLLCAWLER
GSQSVMHHKKTQKGPLPNHEEQLGAVAACQSR*
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