Gchil6788.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6788.t1
Unique NameGchil6788.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length492
Homology
BLAST of Gchil6788.t1 vs. uniprot
Match: A0A2V3J1K8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1K8_9FLOR)

HSP 1 Score: 471 bits (1213), Expect = 5.400e-160
Identity = 261/480 (54.37%), Postives = 348/480 (72.50%), Query Frame = 0
Query:    1 MPPELAASTALATSSVDSDAPLWVTNDIINPLHLPNFDHAAERRHRRIFRIPDRGGAIANWLYTRPEPEAISEDAFRKSAIESTTVFRMEGLSRDGHAITITPSLSSHWLMVPVQSLNGFTMGIAFLDILFQREKSDNTVPPLPVGRFVLEDATGEVFVTGWTDXXXXXXXXXXXXXXERVRELLLYKAPAFNGLKPTQLLLRNSFFERRACHLCGHGRTFSSLPHPCFGRNKRPESLSSIMDNITNVSSVYRRFRGAYFGLCIKTNFSSGQT-TKELQPVFIDIRHGLPSIRGRLYNSLRKNVAFEIP-LTSYFGLHPS-ASSKLLYFQPEPVEVGYPLITLPEEGKNGPPLEESSHTSYPHV---PSPQSIQRESASASSDGVVNGAKGPRRRRRVDDEIGRMSAAHRRRVRNRESAQRSNQLRKQRLAQDRSELNQYKAIIPALKKKYEELLKEQISLLLDASLRGYQDAIEHIVSR 474
            MPP LAA+TALATSSVDS AP WV++D+INP HL +F+++ +R    IFRIP+ GG IA+W+YTRP  EAISE +FR SAIEST+VFR+EG + + +++ ITPSLSSHWLMVP QS+NGFT+G+AFLDI++QR+   N +PPLPVGRFV+EDATGEVFVTGWT XXXXXXXXX     ER RELLLY+AP+ +G +PTQL +RNSF+ERR+CHLCG+ +T SSLP PC   N R  +  +    +TNV+SVYRRFRGAYFGLC+K  + +G+  +KE+QP+FIDIRHGLP+++ R  + L  NV F +  + S    HP+ A SK+L+F P PV+ GYPLI LPEE  +       ++T++P +    SP SI++ +A+ +S    N     R+R+RVDD++ R S+ H+R+VRNR SAQRSN  R+ +L +DR +L+ +K  +P L+ K + LL E   L + A L G Q   E I S+
Sbjct:    9 MPPHLAATTALATSSVDSAAPAWVSHDLINPYHLHDFENSVDRHPSTIFRIPNMGGPIADWVYTRPTMEAISEHSFRCSAIESTSVFRIEGFTDNHNSVKITPSLSSHWLMVPCQSINGFTLGLAFLDIIYQRKNPGNAIPPLPVGRFVIEDATGEVFVTGWTXXXXXXXXXXSVIKCERKRELLLYRAPSESGKRPTQLFMRNSFYERRSCHLCGNTQTISSLPSPCSAINARMSTCPTGDQQLTNVASVYRRFRGAYFGLCVKMLYRAGRMCSKEVQPLFIDIRHGLPAVKRRFRSRLHNNVLFAVDAVNSLSATHPTTAPSKMLFFMPNPVKAGYPLIALPEEQADN---THHTNTAFPKLRRSASPNSIRQHAAADTSQLPANHLT--RQRQRVDDDVHRSSSHHQRKVRNRASAQRSNLRRRLKLQKDRQDLDLFKGQLPTLRAKQQALLLENRRLRISAFLMGLQYEAELIASQ 483          
BLAST of Gchil6788.t1 vs. uniprot
Match: R7QLX4_CHOCR (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLX4_CHOCR)

HSP 1 Score: 311 bits (797), Expect = 3.900e-97
Identity = 183/431 (42.46%), Postives = 260/431 (60.32%), Query Frame = 0
Query:    1 MPPELAASTALATSSVDSDAPLWV---TNDIINPLHLPNFDHAAERRHRRIFRIPDRGGAIANWLYTRPEPEAISEDAFRKSAIESTTVFRMEGLSRDGHAITITPSLSSHWLMVPVQSLNGFTMGIAFLDILFQREKSDNTVPPLPVGRFVLEDATGEVFVTGWTDXXXXXXXXXXXXXXERVRELLLYKAPAFNGLKPTQLLLRNSFFERRACHLCGHGRTFSSLPHPCFGRNK--RPESLSSIMDNITNVSSVYRRFRGAYFGLCIKTNFSSGQTTKELQ-PVFIDIRHGLPSIRGRLYNSLRKNV--AFEIPLTS-YFGLHPSASSKLLYFQPEPVEVGYPLITLPEEGKNGPPLEESSHTSYPHVPSPQSI--QRESASASSDGVVNGAKGPR--RRRRVDDEIGRMSAAHRRRVRNRESAQRSNQ 418
            MPP L  +  LAT  VD+DAP W    T   ++   +P   ++  R  R IFR+P+   A+ +WLY+RP  EA+  DAF  +AIES+T+FRM  +     +I I+P++SSHWLMVP QS+NG T+G+ +LD+L++R + +  VPPLPVG+F +EDATGEVFVT W D              ERVRELL+++ P  +   PT+LL RNSF+ERRACHLCGHG   S LP PC G     RP         +TN++++YRRFRGAYFG+CIKT++++ + T +++ PVF D+R  L  +R R   +LRKNV  +F+ PLT+  FGL P +SS+L         V   L  +    +     +  S      V SP SI    + + ASS+   + +  P   RRR   D++ R + A +R+ RNR++A++SNQ
Sbjct:    8 MPPHLQRTAPLATLVVDADAPSWAVCRTGLTLDRGTIPAMFNS--RSDRTIFRLPESNRAVRDWLYSRPFVEALGNDAFENAAIESSTIFRMHPIDPHDPSIKISPTVSSHWLMVPFQSINGVTIGLVYLDVLYERPEEELRVPPLPVGKFAIEDATGEVFVTAWGDDIMIIGWIQSIIKCERVRELLMFRPPPHDAQPPTELLRRNSFYERRACHLCGHGDHISGLPEPCTGVGPVARPAPFLGGPMPLTNIATLYRRFRGAYFGVCIKTSYANNRMTDQVRVPVFCDVRKSLSPVRERFKINLRKNVQFSFDSPLTNTLFGLSPRSSSRLFILNSNK-PVSSSLAIMDSSKRKRRRRDNCSTADRMDVCSPMSIVGDHDGSIASSEHSESPSSRPSHTRRRAGIDDMDRGTTAFQRKQRNRQAAEKSNQ 435          
BLAST of Gchil6788.t1 vs. uniprot
Match: A0A1X6PD36_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PD36_PORUM)

HSP 1 Score: 117 bits (294), Expect = 2.560e-24
Identity = 84/279 (30.11%), Postives = 127/279 (45.52%), Query Frame = 0
Query:   42 ERRHRRIFRIPDRGGAIANWLYTRPE-PEAISEDAFRKSAIESTTVFRMEGLSRDGHAITIT---PSLSSHWLMVPVQSLNGFTMGIAFLDILFQREKSDNTVPPLPVGRFVLEDATGEVFVTGW--TDXXXXXXXXXXXXXXERVRELLLYKAPAFNGLKPTQLLLRNSFFERRACHLCGHGR------TFSSLPHPCFGRNKRPESLSSIMDNITNVSSV----YRRFRGAYFGLCIKTNFSSGQTT---------KELQPVFIDIRHGLPSIRGRL 295
             R  RRIFR+P     +  WL+T     EA+   + R +A E+  V+R       G  + +    P L+ +WL++PV S+NG T+G+ + ++  +       + P P GRF L++A GE+F T W   D              ERVRE L + APA  G  P  +L R +F+ERR C LCG           S+LP PC     R         ++T+        +  FRG YFG  + + F++  +T         +E + +   +RH  P  R  L
Sbjct:   24 HRSFRRIFRLPLASPWLHRWLFTPASVAEAVPAASLRAAATEAAEVYRKPSGVPPGVPLPLDGMEPKLALNWLLLPVSSVNGMTVGLVWTEVT-KNSLDAAVIAPAPSGRFALDEAAGELFATAWRPADATLIVAWTASVLSCERVRETLHFDAPA-PGTLPAHILTRMAFYERRHCRLCGPASGPGVVPDLSALPPPCVAYPAR---------HVTSPGDFMGFGFPTFRGTYFGTVVISRFAAAGSTVHGGGPLIRQERRLICTRLRHCRPDRRRLL 291          
The following BLAST results are available for this feature:
BLAST of Gchil6788.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J1K8_9FLOR5.400e-16054.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QLX4_CHOCR3.900e-9742.46BZIP domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A1X6PD36_PORUM2.560e-2430.11Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 431..451
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..402
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..420
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 350..378
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..491
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableCDDcd14686bZIPcoord: 402..451
e-value: 2.18202E-8
score: 48.3105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:1183415..1184890 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6788.t1Gchil6788.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 1183415..1184890 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6788.t1 ID=Gchil6788.t1|Name=Gchil6788.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=492bp
MPPELAASTALATSSVDSDAPLWVTNDIINPLHLPNFDHAAERRHRRIFR
IPDRGGAIANWLYTRPEPEAISEDAFRKSAIESTTVFRMEGLSRDGHAIT
ITPSLSSHWLMVPVQSLNGFTMGIAFLDILFQREKSDNTVPPLPVGRFVL
EDATGEVFVTGWTDDIMICGWIQSVISCERVRELLLYKAPAFNGLKPTQL
LLRNSFFERRACHLCGHGRTFSSLPHPCFGRNKRPESLSSIMDNITNVSS
VYRRFRGAYFGLCIKTNFSSGQTTKELQPVFIDIRHGLPSIRGRLYNSLR
KNVAFEIPLTSYFGLHPSASSKLLYFQPEPVEVGYPLITLPEEGKNGPPL
EESSHTSYPHVPSPQSIQRESASASSDGVVNGAKGPRRRRRVDDEIGRMS
AAHRRRVRNRESAQRSNQLRKQRLAQDRSELNQYKAIIPALKKKYEELLK
EQISLLLDASLRGYQDAIEHIVSRKSLDVFGQQDLKMSEEC*
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