Gchil6774.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6774.t1
Unique NameGchil6774.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length350
Homology
BLAST of Gchil6774.t1 vs. uniprot
Match: A0A2V3J202_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J202_9FLOR)

HSP 1 Score: 434 bits (1116), Expect = 9.300e-150
Identity = 227/321 (70.72%), Postives = 265/321 (82.55%), Query Frame = 0
Query:   10 NSNYARVVANIEKVRHEFNVFKAELAHILSATPSLESRNAARELLSHIKANEALLEKADAKVQRLRLAGRLLSRSTVPVPASKRAKRALSVLNAADPHLASATRSVRRKTSRPRYLTLAGKKPATPIREDELQPLMARASEISSTKLLLLKDYGVRFDWCHIFSAFIWFKEVPPPDDAKPKAGGKPAVYLVPEHVACFSTDEAGAGRWSRSVHAVFNIMTERAQAAIRYFMAREDTGEEAFIELVLWLVKHNNIFSAKCDDRRLAFDASRGIFLPPCVHPFDGSGPARFTRGTIPVRSASAQQSSRPAHSSHARSQISAAA 330
            NS  A+  ANI++V+ E N+FKA++  I + T + E+RNAARELL+H+KA+E  LEKA+AKVQRLR  GR+LSR TVPVPAS+RAKRAL++LNAADP LA   RSVR+KT+RPRYLTLAGKKPATPIRE++L  L+ R S++ ST + +LK   V  DW HIFSA IWFKEVP P DA+PK GGK  VY+VPEH+ACF TDE  A RWS S HAVFN+MTERAQAAIRYFMARE+TGE+AF+EL+LWLVKH+NIFSAKCDDRRLAFDASRGIFLPPCVHPFDGSGPARFTRGTIPVR+ S QQS R AH S  +S   AAA
Sbjct:    5 NSVVAKTAANIDRVKQEINLFKAQITQIATPTAAPETRNAARELLNHVKASEINLEKAEAKVQRLRPIGRVLSRPTVPVPASERAKRALTILNAADPSLAHG-RSVRQKTARPRYLTLAGKKPATPIREEDLPALLKRTSQLVSTNITILKTSAVTLDWRHIFSACIWFKEVPAPKDAQPKPGGKSPVYVVPEHIACFRTDE-NASRWSCSDHAVFNVMTERAQAAIRYFMAREETGEDAFVELILWLVKHHNIFSAKCDDRRLAFDASRGIFLPPCVHPFDGSGPARFTRGTIPVRNTSTQQS-RLAHPSQQQSGTHAAA 322          
BLAST of Gchil6774.t1 vs. uniprot
Match: R7QC80_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC80_CHOCR)

HSP 1 Score: 207 bits (527), Expect = 3.430e-60
Identity = 122/293 (41.64%), Postives = 173/293 (59.04%), Query Frame = 0
Query:   38 LSATPSLESRNAARELLSHIKANEALLEKADAKVQRLRLAGRLLSRSTVPVPASKRAKRALSVL-------NAA----------DPHLASATRS--VRRKTS----RPRYLTLAGKKPATPIREDELQPLMARASEISSTKLLLL-KDYGVRFDWCHIFSAFIWFKEVPPPDDAKPKAGGKPAVYLVPEHVACFSTDEAGAGRWSRSVHAVFNIMTERAQAAIRYFMAREDTGEEAFIELVLWLVKHNNIFSAKCDDRRLAFDASRGIFLPPCVHPFDGSGPARFTRGTIPVR 306
            L+   +   R+  + L+   +  EA L K +  + R +   R+ +R T   P S RAKRALSVL       N A           P +    R   VRRKT     +P  L+  GK  ATPIR+D +   + RA+  +   L+ +    GV F+  ++F A++WFK+V PP + +  A  + + Y VPEH+A F  DE    RWSRS + VFN+++ERA AAIR++M RE TGE+AF+ LV WL +H ++F+AKC+ RR+AFDASRG+FLPPCV+PF+     RFTRG+IP+R
Sbjct:    9 LARPETTADRDVLKTLIQRTQRLEAHLHKVEVTLTRSKPGPRIPTRPTASTPPSIRAKRALSVLLTGLNSSNCAKRLGNMAGHDSPDITDDERDRIVRRKTEAIVGKPILLSSTGKVKATPIRDDSIAATLKRAARGTDLSLVQIHSSNGVLFECRNVFRAYMWFKQVDPPTEKRTPAELRHS-YNVPEHIAFFGIDERNISRWSRSQYGVFNVVSERANAAIRFYMNRETTGEDAFVALVKWLSRHKSLFTAKCERRRVAFDASRGMFLPPCVYPFEEDASPRFTRGSIPLR 300          
BLAST of Gchil6774.t1 vs. uniprot
Match: A0A7S1TCL9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCL9_9RHOD)

HSP 1 Score: 88.2 bits (217), Expect = 4.180e-16
Identity = 87/292 (29.79%), Postives = 137/292 (46.92%), Query Frame = 0
Query:   20 IEKVRHEFNVFKAELAHILSATPSLESRNAARELLSHIKAN----EALLEKADAKVQRLRLAGRLLSRSTVPVPASK-------RAKRALSVLNAADPHLASATRSVRRKTSRPRYLTLAGKKPATPIREDEL-QPLMARASEISSTKLLLLKDYGVRFDWCHIFSAFIWFKEVPPPDDAKPKAGGKPAVYLVPEHVACFSTDEAGAGRWSRSVHAVFNIMTERAQAAIRYFMAREDTGEEAFIELVLWLVKHNNIFSAKC--DDRRLAFDASRGIFLPPCVHPFDGSGPAR 297
            + K R++ NV K     ++S   + ES     ++L+ IKA     E+ L  A+  V+  R+  RL S+ T  VP  +       +A+ AL+V+    P L    ++ R+ T              TP+R+++L   + A ++ + S   L +   G+       F A IWF +        P AG      L PEHV      E    RWS S H VF +++ERA AA  +F  ++ +G ++   L+ WL  H+ +   +   D R LAFD+SRG +LPPCV  F+ +   R
Sbjct:   13 VMKARNDLNVVK----QLVSRLDTSESH---AQVLAGIKAKIESRESTLANAEKAVEATRI--RLRSQ-TQGVPRQREILNPIQQARYALAVIGN-GPALGPLPKAERKAT-------------LTPLRQEQLINVINALSTRLPSFMSLQVAPNGMHVTVHDTFIAGIWFTD-------SPFAGVMIEGTLEPEHVNVVGRREP-LSRWSVSQHTVFRLLSERATAAAYFFWRKDISGVDSLFRLLDWLGIHSKLLQDQSVEDSRHLAFDSSRGTYLPPCVRGFEDNRSGR 272          
BLAST of Gchil6774.t1 vs. uniprot
Match: M2XYD3_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XYD3_GALSU)

HSP 1 Score: 59.3 bits (142), Expect = 2.510e-6
Identity = 35/94 (37.23%), Postives = 50/94 (53.19%), Query Frame = 0
Query:  201 PEHVACFSTDEAGAGRWSRSVHAVFNIMTERAQAAIRYFMAR----EDTGEEAFIELVLWLVKHNNIFSAKCDDRRLAFDASRGIFLPPCVHPF 290
            P  V  F  DE     WS S + +F +++ERAQAA+ Y+M +        E+A   L+LW+  H+       +D +L FD +R  FLPPCV  F
Sbjct:  180 PYSVRIFGVDEHVV-YWSWSKYHIFRLISERAQAALCYYMEKAMYSNQPIEKALDTLLLWIKSHDT-----WEDWKLRFDMARSSFLPPCVRSF 267          
The following BLAST results are available for this feature:
BLAST of Gchil6774.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J202_9FLOR9.300e-15070.72Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QC80_CHOCR3.430e-6041.64Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1TCL9_9RHOD4.180e-1629.79Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M2XYD3_GALSU2.510e-637.23Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 57..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..349
IPR021627Mediator complex, subunit Med27PFAMPF11571Med27coord: 216..312
e-value: 5.5E-9
score: 36.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:1050152..1051201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6774.t1Gchil6774.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 1050152..1051201 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6774.t1 ID=Gchil6774.t1|Name=Gchil6774.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=350bp
MASSGSGGGNSNYARVVANIEKVRHEFNVFKAELAHILSATPSLESRNAA
RELLSHIKANEALLEKADAKVQRLRLAGRLLSRSTVPVPASKRAKRALSV
LNAADPHLASATRSVRRKTSRPRYLTLAGKKPATPIREDELQPLMARASE
ISSTKLLLLKDYGVRFDWCHIFSAFIWFKEVPPPDDAKPKAGGKPAVYLV
PEHVACFSTDEAGAGRWSRSVHAVFNIMTERAQAAIRYFMAREDTGEEAF
IELVLWLVKHNNIFSAKCDDRRLAFDASRGIFLPPCVHPFDGSGPARFTR
GTIPVRSASAQQSSRPAHSSHARSQISAAAHASQMARHEARIAAQRQRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021627Mediator_Med27