Gchil6772.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6772.t1
Unique NameGchil6772.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length246
Homology
BLAST of Gchil6772.t1 vs. uniprot
Match: A0A7S1TN31_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TN31_9RHOD)

HSP 1 Score: 123 bits (309), Expect = 7.530e-31
Identity = 86/174 (49.43%), Postives = 100/174 (57.47%), Query Frame = 0
Query:   71 LLTAPPAHAVTSTLRLPPIDRANAARCTPTSSAIGQANAARDTLLDLRECDLRGADLSSFDLSGAIAANAXXXXXXXXXXXXXKTYAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYIGDFAQRTMCRNPTLRGVNPLTGAPTRDSLGCR 244
            L+T P A +     RLPPI+  +  RCTP+SSA+GQANAARD LLDLR+CDL G +   +D+SGAI   A             K YA                               XXXXXXXXXXXXXX      DVYIGDFAQ++MCRNPTL+G NP TGAPTR+SLGCR
Sbjct:   69 LVTLPDAASALPAPRLPPINLRDPNRCTPSSSAMGQANAARDKLLDLRQCDLSGKNFQGYDISGAIMQKAKVDGADMTDIVMSKAYASDASFRDVIFRNGVVDRVQFDRTDLTGSIFEXXXXXXXXXXXXXXTNVDFTDVYIGDFAQKSMCRNPTLKGENPTTGAPTRESLGCR 242          
BLAST of Gchil6772.t1 vs. uniprot
Match: R7QT19_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT19_CHOCR)

HSP 1 Score: 110 bits (275), Expect = 5.900e-26
Identity = 109/183 (59.56%), Postives = 124/183 (67.76%), Query Frame = 0
Query:   62 LAALALSAALLTAPPAHAVTSTLRLPPIDRANAARCTPTSSAIGQANAARDTLLDLRECDLRGADLSSFDLSGAIAANAXXXXXXXXXXXXXKTYAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYIGDFAQRTMCRNPTLRGVNPLTGAPTRDSLGCR 244
            L A AL+   L+ P       T++LPPIDRAN +RC P SS+IGQANAARD +LDLRECD                   XXXXXXXXXX   K+YAP                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYIGDFAQ+++CRNPT++G NP+TGAPTR+SLGCR
Sbjct:   48 LIAAALTVGPLSLPSPAEAAGTMKLPPIDRANPSRCMPASSSIGQANAARDKVLDLRECDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLSKSYAPNAKFRDVDFTNAIADRVTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYIGDFAQKSICRNPTVKGQNPVTGAPTRESLGCR 230          
BLAST of Gchil6772.t1 vs. uniprot
Match: A0A7S4IZ25_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IZ25_9EUKA)

HSP 1 Score: 104 bits (260), Expect = 6.350e-24
Identity = 90/159 (56.60%), Postives = 102/159 (64.15%), Query Frame = 0
Query:   85 RLPPIDRANAARCTPTSSAIGQANAARDTLLDLRECDLRGADLSSFDLSGAIAANAXXXXXXXXXXXXXKTYAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYIGDFAQRTMCRNPTLRGVNPLTGAPTRDSLGC 243
            R PPID+    RC   SSA+GQANAARD+L DLREC + GAD ++FD+SGA+ A               K YAP              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      D YIGDF QR +C+N +L G NP TGAPTR+S GC
Sbjct:   52 RFPPIDKGKKDRCKFLSSAMGQANAARDSLYDLRECKMSGADAAAFDISGALMAEGDFSKVNFKETQLSKVYAPGANFDGADFTNGIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDADFTDAYIGDFDQRKLCKNKSLNGENPSTGAPTRESAGC 210          
BLAST of Gchil6772.t1 vs. uniprot
Match: A0A7S0LGG3_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LGG3_9EUKA)

HSP 1 Score: 102 bits (255), Expect = 4.050e-23
Identity = 100/161 (62.11%), Postives = 115/161 (71.43%), Query Frame = 0
Query:   83 TLRLPPIDRANAARCTPTSSAIGQANAARDTLLDLRECDLRGADLSSFDLSGAIAANAXXXXXXXXXXXXXKTYAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYIGDFAQRTMCRNPTLRGVNPLTGAPTRDSLGC 243
            T + PPIDR+   RCT + SA+GQANAARD L DLREC + GA  +S D+SGA+ A               K YAP      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  + Y+G F QR +C+NPTL+G NP+TGA TR+S GC
Sbjct:   58 TFKFPPIDRSKKDRCTFSGSAMGQANAARDKLYDLRECKMSGASAASLDISGALMAQGDFSKADFKEAQLSKVYAPGAVFDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTEAYVGQFDQRKLCKNPTLKGENPVTGAGTRESAGC 218          
BLAST of Gchil6772.t1 vs. uniprot
Match: A0A7S3B0S2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B0S2_9EUKA)

HSP 1 Score: 101 bits (251), Expect = 1.910e-22
Identity = 109/172 (63.37%), Postives = 123/172 (71.51%), Query Frame = 0
Query:   75 PPAHAV--TSTLRLPPIDRANAARCTPTSSAIGQANAARDTLLDLRECDLRGADLSSFDLSGAIAANAXXXXXXXXXXXXXKTYAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYIGDFAQRTMCRNPTLRGVNPLTGAPTRDSLGCR 244
            PPA A   TS  + PPID  N  RC  +SSA+GQANAARD+L DLR+C + G     FD+SGA+ A               K YA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   + YIGD+ QR +C+NP L+G NP TGAPTR+S GCR
Sbjct:   58 PPALADGDTSKFKFPPIDNTNKNRCQFSSSAMGQANAARDSLYDLRQCSMAGTMAMGFDISGALLAGGDFSGVNFKEAQLSKVYAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTEAYIGDYDQRKLCKNPKLKGENPKTGAPTRESAGCR 229          
BLAST of Gchil6772.t1 vs. uniprot
Match: A0A7S2H4B8_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2H4B8_9EUKA)

HSP 1 Score: 100 bits (248), Expect = 4.690e-22
Identity = 96/171 (56.14%), Postives = 109/171 (63.74%), Query Frame = 0
Query:   75 PPAHAV--TSTLRLPPIDRANAARCTPTSSAIGQANAARDTLLDLRECDLRGADLSSFDLSGAIAANAXXXXXXXXXXXXXKTYAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYIGDFAQRTMCRNPTLRGVNPLTGAPTRDSLGC 243
            PPA A   T   + PPIDR N  RC  +SSA+GQANAARD+L DLREC +   + + FD+SGA+ AN              K YAP      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           + YIG F  R +C+NPTL G NP+TGAPTR S GC
Sbjct:   52 PPALADGDTKEFKFPPIDRKNKDRCKFSSSAMGQANAARDSLYDLRECAMSETNAAGFDISGALMANGDFSKVDFKEAQLSKVYAPGAKFDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEADLKDADFTEAYIGMFDLRKLCKNPTLDGENPITGAPTRASAGC 222          
BLAST of Gchil6772.t1 vs. uniprot
Match: A0A4D9D0Q4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0Q4_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.050e-21
Identity = 104/172 (60.47%), Postives = 117/172 (68.02%), Query Frame = 0
Query:   75 PPAHA--VTSTLRLPPIDRANAARCTPTSSAIGQANAARDTLLDLRECDLRGADLSSFDLSGAIAANAXXXXXXXXXXXXXKTYAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYIGDFAQRTMCRNPTLRGVNPLTGAPTRDSLGCR 244
            PPA A   TS   LPP+D  +  RC   SS +GQANAARD L DLR CD+ G D + FDLSGAI A               K YA    XXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D Y+G+F  R +C+NPTL+G NP+T APT++S GCR
Sbjct:   75 PPAIADGATSRFVLPPVDTKDKGRCQFKSSNMGQANAARDKLYDLRLCDMSGKDATGFDLSGAIMAEGTFKKVNFKEAVLSKAYAKAADXXXXXXXXXXXXRVSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGCR 246          
BLAST of Gchil6772.t1 vs. uniprot
Match: A0A7S2WC40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WC40_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 4.110e-21
Identity = 100/161 (62.11%), Postives = 113/161 (70.19%), Query Frame = 0
Query:   83 TLRLPPIDRANAARCTPTSSAIGQANAARDTLLDLRECDLRGADLSSFDLSGAIAANAXXXXXXXXXXXXXKTYAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYIGDFAQRTMCRNPTLRGVNPLTGAPTRDSLGC 243
            T +LPP+D A   RC  T+SAIGQANAARD+LLDLR CD+ G     FDLSG IA+ A             K++      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    + Y+GDF  R +C+NPTL+G NP TG PTR S GC
Sbjct:   40 TYKLPPVDSAKKDRCMFTTSAIGQANAARDSLLDLRFCDMNGKSAEGFDLSGLIASEAQFENVNFKDAQLSKSFLRDSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDFSESYLGDFDLRKLCKNPTLKGENPKTGNPTRTSAGC 200          
BLAST of Gchil6772.t1 vs. uniprot
Match: A0A1X6PH54_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PH54_PORUM)

HSP 1 Score: 99.0 bits (245), Expect = 6.190e-21
Identity = 122/181 (67.40%), Postives = 136/181 (75.14%), Query Frame = 0
Query:   64 ALALSAALLTAPPAHAVTSTLRLPPIDRANAARCTPTSSAIGQANAARDTLLDLRECDLRGADLSSFDLSGAIAANAXXXXXXXXXXXXXKTYAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYIGDFAQRTMCRNPTLRGVNPLTGAPTRDSLGCR 244
            ALALS  + TA  AHAV    +LPPID+ +  RC  TSSA+GQANAARD+LLDLREC L  ADLS FD         XXXXXXXXXXXXX +Y   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       DVY+G+FA R +C+N +L G NP+TG  TR+SLGCR
Sbjct:  129 ALALSVGVPTA--AHAVLPAPKLPPIDKNDKTRCNVTSSAMGQANAARDSLLDLRECPLSAADLSGFDXXXXXXXXXXXXXXXXXXXXXXXSYVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKNTDWTDVYMGEFATRAVCKNTSLAGTNPVTGEDTRESLGCR 307          
BLAST of Gchil6772.t1 vs. uniprot
Match: A0A7S2WDI2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDI2_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.350e-20
Identity = 100/161 (62.11%), Postives = 113/161 (70.19%), Query Frame = 0
Query:   83 TLRLPPIDRANAARCTPTSSAIGQANAARDTLLDLRECDLRGADLSSFDLSGAIAANAXXXXXXXXXXXXXKTYAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVYIGDFAQRTMCRNPTLRGVNPLTGAPTRDSLGC 243
            T +LPP+D A   RC  T+SAIGQANAARD+LLDLR CD+ G     FDLSG IA+ A             K++      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    + Y+GDF  R +C+NPTL+G NP TG PTR S GC
Sbjct:   96 TYKLPPVDSAKKDRCMFTTSAIGQANAARDSLLDLRFCDMNGKSAEGFDLSGLIASEAQFENVNFKDAQLSKSFLRDSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDFSESYLGDFDLRKLCKNPTLKGENPKTGNPTRTSAGC 256          
The following BLAST results are available for this feature:
BLAST of Gchil6772.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1TN31_9RHOD7.530e-3149.43Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
R7QT19_CHOCR5.900e-2659.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S4IZ25_9EUKA6.350e-2456.60Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S0LGG3_9EUKA4.050e-2362.11Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S3B0S2_9EUKA1.910e-2263.37Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2H4B8_9EUKA4.690e-2256.14Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A4D9D0Q4_9STRA2.050e-2160.47Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2WC40_9STRA4.110e-2162.11Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1X6PH54_PORUM6.190e-2167.40Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S2WDI2_9STRA1.350e-2062.11Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001646Pentapeptide repeatPFAMPF00805Pentapeptidecoord: 116..153
e-value: 3.0E-8
score: 33.1
coord: 174..209
e-value: 4.5E-9
score: 35.8
NoneNo IPR availableGENE3D2.160.20.80coord: 113..244
e-value: 9.3E-30
score: 104.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..245
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 116..212
IPR044195Pentapeptide repeat containing protein TL17-likePANTHERPTHR47485THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTICcoord: 27..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:1015188..1015925 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6772.t1Gchil6772.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 1015188..1015925 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6772.t1 ID=Gchil6772.t1|Name=Gchil6772.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=246bp
MAAAIVVAPARTAFVANPAVFARVSVAPSRAKTPVAVAVTMTSPSPSPSP
SPSPLQRARATLAALALSAALLTAPPAHAVTSTLRLPPIDRANAARCTPT
SSAIGQANAARDTLLDLRECDLRGADLSSFDLSGAIAANADLSGARLVEA
QLSKTYAPGASFRGADFTNAVADRVVFDGADLSGAVFANAVLSDSSFENA
NLENVDFTDVYIGDFAQRTMCRNPTLRGVNPLTGAPTRDSLGCRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0016465peptide_repeat
IPR044195TL17-like