Gchil6749.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6749.t1
Unique NameGchil6749.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length195
Homology
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BLAST of Gchil6749.t1 vs. uniprot
Match: A0A2N2W8S5_9BACT (4-alpha-glucanotransferase n=1 Tax=Bacteroidetes bacterium HGW-Bacteroidetes-8 TaxID=2013698 RepID=A0A2N2W8S5_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 2.580e-7
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0 
Query:  112 LPAGC-VKVVGNHYRLGEWNVENALRLARAEDVLVAEVFTPRNDI----QYKYVFVSAEGDITWEEGDNRSVPA 180
            +P+GC VK+ GN   LG WN+  A ++ R ED L     T R+ +    QYK++  + +G+I WEEG+NRS+PA
Sbjct:  134 IPSGCSVKISGNCSELGNWNILKAAKMNRKEDGLW-HYSTNRDKLDSLTQYKFIITTNKGEIVWEEGENRSLPA 206
The following BLAST results are available for this feature:
BLAST of Gchil6749.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2N2W8S5_9BACT2.580e-743.244-alpha-glucanotransferase n=1 Tax=Bacteroidetes b... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002044Carbohydrate binding module family 20SMARTSM01065CBM_20_2coord: 105..188
e-value: 1.0E-5
score: 35.0
IPR002044Carbohydrate binding module family 20PFAMPF00686CBM_20coord: 116..180
e-value: 9.4E-13
score: 47.8
IPR002044Carbohydrate binding module family 20PROSITEPS51166CBM20coord: 87..194
score: 10.090926
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 107..194
e-value: 3.5E-14
score: 54.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..92
IPR013784Carbohydrate-binding-like foldSUPERFAMILY49452Starch-binding domain-likecoord: 115..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:832801..833385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6749.t1Gchil6749.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 832801..833385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6749.t1 ID=Gchil6749.t1|Name=Gchil6749.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=195bp
MENHSDSALREQLNAVHMMSTPCSVVVVLSSSSNLAQVAHQAAFFVDDAH
TQPPVFLLRNNHPQPTCVDAHTPLTTPRASLSPEPRPSPPDAPLLRFELA
VQSLPHHARLALPAGCVKVVGNHYRLGEWNVENALRLARAEDVLVAEVFT
PRNDIQYKYVFVSAEGDITWEEGDNRSVPATDEPLLRLEERWRQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002044CBM_fam20
IPR013783Ig-like_fold
IPR013784Carb-bd-like_fold