Gchil6710.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6710.t1
Unique NameGchil6710.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length80
Homology
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BLAST of Gchil6710.t1 vs. uniprot
Match: R7Q7D3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7D3_CHOCR)

HSP 1 Score: 71.2 bits (173), Expect = 1.310e-14
Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = 0 
Query:   10 FFTFGLPFLTFMVAGHWALTFVTQGRYDVRDEKERQQELMTTERRVVIPEEA----LKLPPQPSSDYEMKPIPR 79
            F TFGLPFLTFMVAG   L ++ +GRY+V+DE  +QQ LM+TE +VV+P       L++PP   +DY++ P+PR
Sbjct:    8 FLTFGLPFLTFMVAGLQGLAYINRGRYEVKDEVAKQQALMSTENKVVLPPRRNLAELEIPPV--TDYDIVPVPR 79
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BLAST of Gchil6710.t1 vs. uniprot
Match: A0A146I8J8_9AGAR (Cytochrome c oxidase assembly protein COX16, mitochondrial n=2 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146I8J8_9AGAR)

HSP 1 Score: 51.2 bits (121), Expect = 2.330e-6
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0 
Query:   13 FGLPFLTFMVAGHWALTFVTQGRYDVRDE------KERQQELMTTERRVVIPEEALKLPPQPSSDYEMKPIPR 79
            FG+PF+  MV   + L+FVTQ +YD+ D+      KE++ +L    R+  I EE  +L  QP  D++MK +PR
Sbjct:   25 FGIPFIFLMVGTSYGLSFVTQTKYDLHDQRVKQVTKEQELKLDHDRRKFDIREEYFRLSAQPEEDWDMKRVPR 97
The following BLAST results are available for this feature:
BLAST of Gchil6710.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
R7Q7D3_CHOCR1.310e-1451.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A146I8J8_9AGAR2.330e-639.73Cytochrome c oxidase assembly protein COX16, mitoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020164Cytochrome c oxidase assembly protein COX16PFAMPF14138COX16coord: 12..79
e-value: 1.4E-14
score: 54.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..79
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..79
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:432127..432442 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6710.t1Gchil6710.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 432127..432442 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6710.t1 ID=Gchil6710.t1|Name=Gchil6710.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=80bp
MAMVGSRAQFFTFGLPFLTFMVAGHWALTFVTQGRYDVRDEKERQQELMT
TERRVVIPEEALKLPPQPSSDYEMKPIPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020164Cyt_c_Oxase_assmbl_COX16